RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 LTBP4Q8N2S1 1624 aa20.45■□□□□ 0.86
PRKCSH-202ENST00000585540 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
PRKCSH-202ENST00000585540 PLEKHG1Q9ULL1 1385 aa20.44■□□□□ 0.86
PRKCSH-202ENST00000585540 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
PRKCSH-202ENST00000585540 DIP2AQ14689 1571 aa20.42■□□□□ 0.86
PRKCSH-202ENST00000585540 LTKP29376 864 aa20.42■□□□□ 0.86
PRKCSH-202ENST00000585540 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
PRKCSH-202ENST00000585540 CERKQ8TCT0 537 aa20.39■□□□□ 0.85
PRKCSH-202ENST00000585540 RPGRIP1LQ68CZ1 1315 aa20.38■□□□□ 0.85
PRKCSH-202ENST00000585540 PPP1R15AO75807 674 aaPredicted RBP20.38■□□□□ 0.85
PRKCSH-202ENST00000585540 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-202ENST00000585540 TRIM26Q12899 539 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-202ENST00000585540 PIK3R4Q99570 1358 aa20.35■□□□□ 0.85
PRKCSH-202ENST00000585540 NEXMIFQ5QGS0 1516 aa20.35■□□□□ 0.85
PRKCSH-202ENST00000585540 SETBP1Q9Y6X0 1596 aa20.34■□□□□ 0.85
PRKCSH-202ENST00000585540 ZNF326Q5BKZ1 582 aaKnown RBP20.33■□□□□ 0.85
PRKCSH-202ENST00000585540 NWD1Q149M9 1564 aa20.33■□□□□ 0.84
PRKCSH-202ENST00000585540 FBXO41Q8TF61 875 aa20.32■□□□□ 0.84
PRKCSH-202ENST00000585540 NKTRP30414 1462 aaKnown RBP20.31■□□□□ 0.84
PRKCSH-202ENST00000585540 TBX22Q9Y458 520 aa20.31■□□□□ 0.84
PRKCSH-202ENST00000585540 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
PRKCSH-202ENST00000585540 SPATA31E1Q6ZUB1 1445 aa20.29■□□□□ 0.84
PRKCSH-202ENST00000585540 PPLO60437 1756 aa20.29■□□□□ 0.84
PRKCSH-202ENST00000585540 ANKRD30BQ9BXX2 1392 aa20.29■□□□□ 0.84
PRKCSH-202ENST00000585540 ADAMTS13Q76LX8 1427 aa20.27■□□□□ 0.84
PRKCSH-202ENST00000585540 KCNA6P17658 529 aa20.27■□□□□ 0.84
PRKCSH-202ENST00000585540 FOXD1Q16676 465 aa20.27■□□□□ 0.84
PRKCSH-202ENST00000585540 BCANQ96GW7 911 aa20.27■□□□□ 0.84
PRKCSH-202ENST00000585540 IFT172Q9UG01 1749 aa20.25■□□□□ 0.83
PRKCSH-202ENST00000585540 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-202ENST00000585540 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
PRKCSH-202ENST00000585540 STRCP1A6NGW2 1772 aa20.24■□□□□ 0.83
PRKCSH-202ENST00000585540 STAC3Q96MF2 364 aa20.24■□□□□ 0.83
PRKCSH-202ENST00000585540 LRRC7Q96NW7 1537 aa20.23■□□□□ 0.83
PRKCSH-202ENST00000585540 NCOA3Q9Y6Q9 1424 aa20.23■□□□□ 0.83
PRKCSH-202ENST00000585540 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
PRKCSH-202ENST00000585540 MYOM2P54296 1465 aa20.22■□□□□ 0.83
PRKCSH-202ENST00000585540 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
PRKCSH-202ENST00000585540 LAMC1P11047 1609 aa20.17■□□□□ 0.82
PRKCSH-202ENST00000585540 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
PRKCSH-202ENST00000585540 SETD1AO15047 1707 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-202ENST00000585540 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-202ENST00000585540 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
PRKCSH-202ENST00000585540 TOM1O60784 492 aa20.15■□□□□ 0.82
PRKCSH-202ENST00000585540 PIK3C2GO75747 1445 aa20.15■□□□□ 0.82
PRKCSH-202ENST00000585540 NRXN1Q9ULB1 1477 aa20.15■□□□□ 0.82
PRKCSH-202ENST00000585540 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
PRKCSH-202ENST00000585540 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
PRKCSH-202ENST00000585540 PTCH1Q13635 1447 aa20.12■□□□□ 0.81
PRKCSH-202ENST00000585540 TMEM94Q12767 1356 aa20.12■□□□□ 0.81
PRKCSH-202ENST00000585540 XIRP1Q702N8 1843 aaKnown RBP20.12■□□□□ 0.81
PRKCSH-202ENST00000585540 PROSER2Q86WR7 435 aaPredicted RBP20.11■□□□□ 0.81
PRKCSH-202ENST00000585540 UBAP1LF5GYI3 381 aa20.1■□□□□ 0.81
PRKCSH-202ENST00000585540 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
PRKCSH-202ENST00000585540 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
PRKCSH-202ENST00000585540 MSH6P52701 1360 aa20.09■□□□□ 0.81
PRKCSH-202ENST00000585540 DHX57Q6P158 1386 aaKnown RBP20.09■□□□□ 0.81
PRKCSH-202ENST00000585540 METP08581 1390 aa20.08■□□□□ 0.81
PRKCSH-202ENST00000585540 ADGRF5Q8IZF2 1346 aa20.08■□□□□ 0.81
PRKCSH-202ENST00000585540 DCCP43146 1447 aa20.08■□□□□ 0.8
PRKCSH-202ENST00000585540 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
PRKCSH-202ENST00000585540 TECPR2O15040 1411 aa20.05■□□□□ 0.8
PRKCSH-202ENST00000585540 C14orf93Q9H972 538 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-202ENST00000585540 LRPPRCP42704 1394 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-202ENST00000585540 ABCC11Q96J66 1382 aa20.01■□□□□ 0.79
PRKCSH-202ENST00000585540 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
PRKCSH-202ENST00000585540 C19orf44Q9H6X5 657 aa20.01■□□□□ 0.79
PRKCSH-202ENST00000585540 KIAA1210Q9ULL0 1709 aa20.01■□□□□ 0.79
PRKCSH-202ENST00000585540 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
PRKCSH-202ENST00000585540 CADPS2Q86UW7 1296 aa20■□□□□ 0.79
PRKCSH-202ENST00000585540 DCAF11Q8TEB1 546 aa20■□□□□ 0.79
PRKCSH-202ENST00000585540 ASXL1Q8IXJ9 1541 aa20■□□□□ 0.79
PRKCSH-202ENST00000585540 SIRT1Q96EB6 747 aa19.99■□□□□ 0.79
PRKCSH-202ENST00000585540 FAM135BQ49AJ0 1406 aa19.99■□□□□ 0.79
PRKCSH-202ENST00000585540 C14orf37Q86TY3 774 aa19.98■□□□□ 0.79
PRKCSH-202ENST00000585540 YTHDC2Q9H6S0 1430 aaKnown RBP19.98■□□□□ 0.79
PRKCSH-202ENST00000585540 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.98■□□□□ 0.79
PRKCSH-202ENST00000585540 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
PRKCSH-202ENST00000585540 CLSPNQ9HAW4 1339 aa19.96■□□□□ 0.79
PRKCSH-202ENST00000585540 ADGRB1O14514 1584 aa19.95■□□□□ 0.78
PRKCSH-202ENST00000585540 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.78
PRKCSH-202ENST00000585540 NALCNQ8IZF0 1738 aa19.94■□□□□ 0.78
PRKCSH-202ENST00000585540 ATF3P18847 181 aa19.94■□□□□ 0.78
PRKCSH-202ENST00000585540 CFAP70Q5T0N1 1121 aa19.93■□□□□ 0.78
PRKCSH-202ENST00000585540 CDC42BPGQ6DT37 1551 aa19.92■□□□□ 0.78
PRKCSH-202ENST00000585540 PIP4K2BP78356 416 aa19.91■□□□□ 0.78
PRKCSH-202ENST00000585540 KDM2AQ9Y2K7 1162 aa19.91■□□□□ 0.78
PRKCSH-202ENST00000585540 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
PRKCSH-202ENST00000585540 ROBO1Q9Y6N7 1651 aa19.9■□□□□ 0.78
PRKCSH-202ENST00000585540 SLAIN2Q9P270 581 aa19.89■□□□□ 0.77
PRKCSH-202ENST00000585540 RBM33Q96EV2 1170 aaKnown RBP19.88■□□□□ 0.77
PRKCSH-202ENST00000585540 MST1RQ04912 1400 aa19.87■□□□□ 0.77
PRKCSH-202ENST00000585540 TONSLQ96HA7 1378 aa19.87■□□□□ 0.77
PRKCSH-202ENST00000585540 TMEM132EQ6IEE7 984 aa19.87■□□□□ 0.77
PRKCSH-202ENST00000585540 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
PRKCSH-202ENST00000585540 SIN3AQ96ST3 1273 aa19.86■□□□□ 0.77
PRKCSH-202ENST00000585540 STK26Q9P289 416 aa19.85■□□□□ 0.77
PRKCSH-202ENST00000585540 ADGRB2O60241 1585 aa19.85■□□□□ 0.77
PRKCSH-202ENST00000585540 AHDC1Q5TGY3 1603 aaPredicted RBP19.84■□□□□ 0.77
PRKCSH-202ENST00000585540 NEUROD1Q13562 356 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms