RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 NEURL4Q96JN8 1562 aa17.6■□□□□ 0.41
CSNK1D-222ENST00000584377 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
CSNK1D-222ENST00000584377 ZMYM4Q5VZL5 1548 aa17.6■□□□□ 0.41
CSNK1D-222ENST00000584377 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
CSNK1D-222ENST00000584377 ZNF518AQ6AHZ1 1483 aa17.59■□□□□ 0.41
CSNK1D-222ENST00000584377 RCAN3Q9UKA8 241 aa17.59■□□□□ 0.41
CSNK1D-222ENST00000584377 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
CSNK1D-222ENST00000584377 RRP1P56182 461 aaKnown RBP17.58■□□□□ 0.41
CSNK1D-222ENST00000584377 EFCAB6Q5THR3 1501 aa17.58■□□□□ 0.41
CSNK1D-222ENST00000584377 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.4
CSNK1D-222ENST00000584377 SYNMO15061 1565 aa17.57■□□□□ 0.4
CSNK1D-222ENST00000584377 NBR1Q14596 966 aa17.57■□□□□ 0.4
CSNK1D-222ENST00000584377 AMER1Q5JTC6 1135 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-222ENST00000584377 KIAA1210Q9ULL0 1709 aa17.57■□□□□ 0.4
CSNK1D-222ENST00000584377 CFAP70Q5T0N1 1121 aa17.56■□□□□ 0.4
CSNK1D-222ENST00000584377 MYOM2P54296 1465 aa17.56■□□□□ 0.4
CSNK1D-222ENST00000584377 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
CSNK1D-222ENST00000584377 ADGRF5Q8IZF2 1346 aa17.55■□□□□ 0.4
CSNK1D-222ENST00000584377 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
CSNK1D-222ENST00000584377 MAP3K4Q9Y6R4 1608 aa17.54■□□□□ 0.4
CSNK1D-222ENST00000584377 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
CSNK1D-222ENST00000584377 PPRC1Q5VV67 1664 aaKnown RBP17.54■□□□□ 0.4
CSNK1D-222ENST00000584377 LMTK2Q8IWU2 1503 aa17.53■□□□□ 0.4
CSNK1D-222ENST00000584377 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-222ENST00000584377 CD109Q6YHK3 1445 aa17.53■□□□□ 0.4
CSNK1D-222ENST00000584377 KIF1BO60333 1816 aa17.53■□□□□ 0.4
CSNK1D-222ENST00000584377 ADAMTS8Q9UP79 889 aa17.53■□□□□ 0.4
CSNK1D-222ENST00000584377 ABCA6Q8N139 1617 aa17.52■□□□□ 0.4
CSNK1D-222ENST00000584377 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.4
CSNK1D-222ENST00000584377 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
CSNK1D-222ENST00000584377 POGZQ7Z3K3 1410 aa17.51■□□□□ 0.39
CSNK1D-222ENST00000584377 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
CSNK1D-222ENST00000584377 MYOM1P52179 1685 aa17.5■□□□□ 0.39
CSNK1D-222ENST00000584377 EXOC6Q8TAG9 804 aa17.5■□□□□ 0.39
CSNK1D-222ENST00000584377 NPC1L1Q9UHC9 1359 aa17.49■□□□□ 0.39
CSNK1D-222ENST00000584377 KDM5AP29375 1690 aaKnown RBP17.49■□□□□ 0.39
CSNK1D-222ENST00000584377 CFAP74Q9C0B2 1584 aa17.49■□□□□ 0.39
CSNK1D-222ENST00000584377 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
CSNK1D-222ENST00000584377 MROH2AA6NES4 1674 aa17.48■□□□□ 0.39
CSNK1D-222ENST00000584377 GGT6Q6P531 493 aa17.48■□□□□ 0.39
CSNK1D-222ENST00000584377 MLH3Q9UHC1 1453 aa17.48■□□□□ 0.39
CSNK1D-222ENST00000584377 PAK3O75914 559 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-222ENST00000584377 ERVK-7P63135 1459 aa17.48■□□□□ 0.39
CSNK1D-222ENST00000584377 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
CSNK1D-222ENST00000584377 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
CSNK1D-222ENST00000584377 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
CSNK1D-222ENST00000584377 NOS1P29475 1434 aa17.47■□□□□ 0.39
CSNK1D-222ENST00000584377 NPATQ14207 1427 aa17.47■□□□□ 0.39
CSNK1D-222ENST00000584377 ADGRB3O60242 1522 aa17.46■□□□□ 0.39
CSNK1D-222ENST00000584377 FRMPD1Q5SYB0 1578 aa17.46■□□□□ 0.39
CSNK1D-222ENST00000584377 HECW2Q9P2P5 1572 aa17.45■□□□□ 0.38
CSNK1D-222ENST00000584377 SBNO2Q9Y2G9 1366 aa17.43■□□□□ 0.38
CSNK1D-222ENST00000584377 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
CSNK1D-222ENST00000584377 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-222ENST00000584377 PLEKHH1Q9ULM0 1364 aa17.42■□□□□ 0.38
CSNK1D-222ENST00000584377 PLIN1O60240 522 aa17.42■□□□□ 0.38
CSNK1D-222ENST00000584377 CARD14Q9BXL6 1004 aa17.41■□□□□ 0.38
CSNK1D-222ENST00000584377 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
CSNK1D-222ENST00000584377 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
CSNK1D-222ENST00000584377 CFAP65Q6ZU64 1925 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-222ENST00000584377 UBE2Q2Q8WVN8 375 aa17.4■□□□□ 0.38
CSNK1D-222ENST00000584377 ABCC3O15438 1527 aa17.4■□□□□ 0.38
CSNK1D-222ENST00000584377 RAPGEF3O95398 923 aa17.39■□□□□ 0.37
CSNK1D-222ENST00000584377 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-222ENST00000584377 TRAK1Q9UPV9 953 aa17.39■□□□□ 0.37
CSNK1D-222ENST00000584377 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-222ENST00000584377 ZNF521Q96K83 1311 aa17.39■□□□□ 0.37
CSNK1D-222ENST00000584377 NEO1Q92859 1461 aa17.38■□□□□ 0.37
CSNK1D-222ENST00000584377 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
CSNK1D-222ENST00000584377 GOLGA2Q08379 1002 aa17.38■□□□□ 0.37
CSNK1D-222ENST00000584377 DUSP27Q5VZP5 1158 aa17.38■□□□□ 0.37
CSNK1D-222ENST00000584377 RTN4Q9NQC3 1192 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-222ENST00000584377 PPLO60437 1756 aa17.37■□□□□ 0.37
CSNK1D-222ENST00000584377 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
CSNK1D-222ENST00000584377 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
CSNK1D-222ENST00000584377 CRBNQ96SW2 442 aa17.35■□□□□ 0.37
CSNK1D-222ENST00000584377 ADGRB1O14514 1584 aa17.35■□□□□ 0.37
CSNK1D-222ENST00000584377 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.35■□□□□ 0.37
CSNK1D-222ENST00000584377 CAMSAP1Q5T5Y3 1602 aa17.34■□□□□ 0.37
CSNK1D-222ENST00000584377 APAF1O14727 1248 aa17.33■□□□□ 0.36
CSNK1D-222ENST00000584377 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-222ENST00000584377 SLFN5Q08AF3 891 aa17.32■□□□□ 0.36
CSNK1D-222ENST00000584377 NSD3Q9BZ95 1437 aa17.32■□□□□ 0.36
CSNK1D-222ENST00000584377 DIP2CQ9Y2E4 1556 aa17.31■□□□□ 0.36
CSNK1D-222ENST00000584377 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
CSNK1D-222ENST00000584377 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-222ENST00000584377 C20orf194Q5TEA3 1177 aa17.31■□□□□ 0.36
CSNK1D-222ENST00000584377 SLC12A5Q9H2X9 1139 aa17.31■□□□□ 0.36
CSNK1D-222ENST00000584377 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-222ENST00000584377 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
CSNK1D-222ENST00000584377 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-222ENST00000584377 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-222ENST00000584377 POLR3AO14802 1390 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-222ENST00000584377 ZC3H13Q5T200 1668 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-222ENST00000584377 MORC1Q86VD1 984 aa17.29■□□□□ 0.36
CSNK1D-222ENST00000584377 PIK3C2BO00750 1634 aa17.28■□□□□ 0.36
CSNK1D-222ENST00000584377 TRMT2AQ8IZ69 625 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-222ENST00000584377 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
CSNK1D-222ENST00000584377 ARHGAP31Q2M1Z3 1444 aa17.27■□□□□ 0.36
CSNK1D-222ENST00000584377 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms