RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 MIA2Q96PC5 1412 aa12.71□□□□□ -0.37
CDH8-211ENST00000584337 PDZRN3Q9UPQ7 1066 aa12.71□□□□□ -0.38
CDH8-211ENST00000584337 ST20-MTHFSA0A0A6YYL1 179 aa12.71□□□□□ -0.38
CDH8-211ENST00000584337 IGHDP01880 384 aa12.71□□□□□ -0.38
CDH8-211ENST00000584337 USP19O94966 1318 aa12.7□□□□□ -0.38
CDH8-211ENST00000584337 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
CDH8-211ENST00000584337 TMEM51Q9NW97 253 aa12.7□□□□□ -0.38
CDH8-211ENST00000584337 KLHL40Q2TBA0 621 aa12.7□□□□□ -0.38
CDH8-211ENST00000584337 RNF214Q8ND24 703 aa12.7□□□□□ -0.38
CDH8-211ENST00000584337 NAIPQ13075 1403 aa12.69□□□□□ -0.38
CDH8-211ENST00000584337 MYRIPQ8NFW9 859 aa12.69□□□□□ -0.38
CDH8-211ENST00000584337 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
CDH8-211ENST00000584337 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
CDH8-211ENST00000584337 TSPYL1Q9H0U9 437 aa12.69□□□□□ -0.38
CDH8-211ENST00000584337 PANK1Q8TE04 598 aa12.68□□□□□ -0.38
CDH8-211ENST00000584337 ZNF830Q96NB3 372 aaPredicted RBP12.68□□□□□ -0.38
CDH8-211ENST00000584337 KNSTRNQ9Y448 316 aa12.68□□□□□ -0.38
CDH8-211ENST00000584337 CALCOCO1Q9P1Z2 691 aa12.68□□□□□ -0.38
CDH8-211ENST00000584337 NUCB2P80303 420 aa12.67□□□□□ -0.38
CDH8-211ENST00000584337 RSPH4AQ5TD94 716 aa12.67□□□□□ -0.38
CDH8-211ENST00000584337 BCAR3O75815 825 aa12.67□□□□□ -0.38
CDH8-211ENST00000584337 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
CDH8-211ENST00000584337 RBM25P49756 843 aaKnown RBP12.66□□□□□ -0.38
CDH8-211ENST00000584337 DUSP27Q5VZP5 1158 aa12.65□□□□□ -0.38
CDH8-211ENST00000584337 PANK3Q9H999 370 aa12.64□□□□□ -0.39
CDH8-211ENST00000584337 ZFP91Q96JP5 570 aaPredicted RBP12.64□□□□□ -0.39
CDH8-211ENST00000584337 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
CDH8-211ENST00000584337 PLEKHH2Q8IVE3 1493 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 TSC1Q92574 1164 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 PHF14O94880 888 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 SSFA2P28290 1259 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 MPNDQ8N594 471 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 FEZ1Q99689 392 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 ERICH4A6NGS2 130 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
CDH8-211ENST00000584337 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
CDH8-211ENST00000584337 ZSCAN23Q3MJ62 389 aa12.62□□□□□ -0.39
CDH8-211ENST00000584337 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH8-211ENST00000584337 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
CDH8-211ENST00000584337 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
CDH8-211ENST00000584337 GOLGA6L6A8MZA4 724 aa12.62□□□□□ -0.39
CDH8-211ENST00000584337 BAG4O95429 457 aaKnown RBP12.62□□□□□ -0.39
CDH8-211ENST00000584337 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH8-211ENST00000584337 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
CDH8-211ENST00000584337 K7ELQ4 463 aaPredicted RBP12.61□□□□□ -0.39
CDH8-211ENST00000584337 SMC5Q8IY18 1101 aa12.61□□□□□ -0.39
CDH8-211ENST00000584337 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
CDH8-211ENST00000584337 FAM177BA6PVY3 158 aa12.61□□□□□ -0.39
CDH8-211ENST00000584337 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
CDH8-211ENST00000584337 ZBTB22O15209 634 aa12.61□□□□□ -0.39
CDH8-211ENST00000584337 GABPB1Q06547 395 aaPredicted RBP12.61□□□□□ -0.39
CDH8-211ENST00000584337 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
CDH8-211ENST00000584337 OGFRQ9NZT2 677 aa12.61□□□□□ -0.39
CDH8-211ENST00000584337 CFDP1Q9UEE9 299 aaPredicted RBP12.61□□□□□ -0.39
CDH8-211ENST00000584337 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDH8-211ENST00000584337 RBSNQ9H1K0 784 aa12.61□□□□□ -0.39
CDH8-211ENST00000584337 ZNF445P59923 1031 aa12.6□□□□□ -0.39
CDH8-211ENST00000584337 SLFN5Q08AF3 891 aa12.6□□□□□ -0.39
CDH8-211ENST00000584337 TRERF1Q96PN7 1200 aa12.6□□□□□ -0.39
CDH8-211ENST00000584337 PTPN23Q9H3S7 1636 aa12.6□□□□□ -0.39
CDH8-211ENST00000584337 PLEKHD1A6NEE1 506 aa12.6□□□□□ -0.39
CDH8-211ENST00000584337 U2AF2P26368 475 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDH8-211ENST00000584337 APAF1O14727 1248 aa12.6□□□□□ -0.39
CDH8-211ENST00000584337 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
CDH8-211ENST00000584337 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
CDH8-211ENST00000584337 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
CDH8-211ENST00000584337 FHOD3Q2V2M9 1422 aa12.59□□□□□ -0.39
CDH8-211ENST00000584337 SYCE3A1L190 88 aa12.59□□□□□ -0.39
CDH8-211ENST00000584337 MBD3O95983 291 aa12.59□□□□□ -0.39
CDH8-211ENST00000584337 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
CDH8-211ENST00000584337 SNX21Q969T3 373 aa12.59□□□□□ -0.39
CDH8-211ENST00000584337 NINLQ9Y2I6 1382 aa12.58□□□□□ -0.4
CDH8-211ENST00000584337 TEX2Q8IWB9 1127 aa12.58□□□□□ -0.4
CDH8-211ENST00000584337 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
CDH8-211ENST00000584337 TMF1P82094 1093 aa12.57□□□□□ -0.4
CDH8-211ENST00000584337 CERS3Q8IU89 383 aa12.57□□□□□ -0.4
CDH8-211ENST00000584337 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
CDH8-211ENST00000584337 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
CDH8-211ENST00000584337 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
CDH8-211ENST00000584337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDH8-211ENST00000584337 MYOM3Q5VTT5 1437 aa12.57□□□□□ -0.4
CDH8-211ENST00000584337 PKD2Q13563 968 aa12.57□□□□□ -0.4
CDH8-211ENST00000584337 SPATA31E1Q6ZUB1 1445 aa12.56□□□□□ -0.4
CDH8-211ENST00000584337 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
CDH8-211ENST00000584337 FOXD4L5Q5VV16 416 aaPredicted RBP12.56□□□□□ -0.4
CDH8-211ENST00000584337 FOXD4L4Q8WXT5 416 aaPredicted RBP12.56□□□□□ -0.4
CDH8-211ENST00000584337 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
CDH8-211ENST00000584337 LRSAM1Q6UWE0 723 aa12.55□□□□□ -0.4
CDH8-211ENST00000584337 DRC7Q8IY82 874 aa12.55□□□□□ -0.4
CDH8-211ENST00000584337 ANKRD30BQ9BXX2 1392 aa12.55□□□□□ -0.4
CDH8-211ENST00000584337 IBTKQ9P2D0 1353 aaPredicted RBP12.55□□□□□ -0.4
CDH8-211ENST00000584337 GOLGA6L1Q8N7Z2 621 aa12.55□□□□□ -0.4
CDH8-211ENST00000584337 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
CDH8-211ENST00000584337 TPM3P06753 285 aa12.54□□□□□ -0.4
CDH8-211ENST00000584337 TEX35Q5T0J7 233 aa12.54□□□□□ -0.4
CDH8-211ENST00000584337 RPRD2Q5VT52 1461 aaKnown RBP12.54□□□□□ -0.4
CDH8-211ENST00000584337 ESF1Q9H501 851 aaKnown RBP12.54□□□□□ -0.4
CDH8-211ENST00000584337 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
CDH8-211ENST00000584337 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms