RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 DIAPH3Q9NSV4 1193 aa11.71□□□□□ -0.53
SKA2-207ENST00000583380 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
SKA2-207ENST00000583380 TPM3P06753 285 aa11.7□□□□□ -0.54
SKA2-207ENST00000583380 CHAF1AQ13111 956 aaPredicted RBP11.7□□□□□ -0.54
SKA2-207ENST00000583380 PMFBP1Q8TBY8 1022 aa11.7□□□□□ -0.54
SKA2-207ENST00000583380 OGFRQ9NZT2 677 aa11.7□□□□□ -0.54
SKA2-207ENST00000583380 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
SKA2-207ENST00000583380 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
SKA2-207ENST00000583380 NAIPQ13075 1403 aa11.69□□□□□ -0.54
SKA2-207ENST00000583380 MFAP1P55081 439 aaKnown RBP11.69□□□□□ -0.54
SKA2-207ENST00000583380 PDE3AQ14432 1141 aa11.69□□□□□ -0.54
SKA2-207ENST00000583380 KLHL40Q2TBA0 621 aa11.69□□□□□ -0.54
SKA2-207ENST00000583380 RGS22Q8NE09 1264 aa11.69□□□□□ -0.54
SKA2-207ENST00000583380 UHRF1BP1LA0JNW5 1464 aa11.69□□□□□ -0.54
SKA2-207ENST00000583380 RPRD2Q5VT52 1461 aaKnown RBP11.69□□□□□ -0.54
SKA2-207ENST00000583380 KIAA2012Q0VF49 1180 aa11.68□□□□□ -0.54
SKA2-207ENST00000583380 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
SKA2-207ENST00000583380 BLMP54132 1417 aaPredicted RBP11.68□□□□□ -0.54
SKA2-207ENST00000583380 USP19O94966 1318 aa11.67□□□□□ -0.54
SKA2-207ENST00000583380 EFCAB5A4FU69 1503 aa11.67□□□□□ -0.54
SKA2-207ENST00000583380 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
SKA2-207ENST00000583380 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
SKA2-207ENST00000583380 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
SKA2-207ENST00000583380 CAMSAP2Q08AD1 1489 aa11.66□□□□□ -0.54
SKA2-207ENST00000583380 NCOA3Q9Y6Q9 1424 aa11.66□□□□□ -0.54
SKA2-207ENST00000583380 ZNF771Q7L3S4 317 aaPredicted RBP11.65□□□□□ -0.54
SKA2-207ENST00000583380 GCC2Q8IWJ2 1684 aa11.65□□□□□ -0.55
SKA2-207ENST00000583380 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
SKA2-207ENST00000583380 GZF1Q9H116 711 aaPredicted RBP11.64□□□□□ -0.55
SKA2-207ENST00000583380 ZNF830Q96NB3 372 aaPredicted RBP11.63□□□□□ -0.55
SKA2-207ENST00000583380 CLASP1Q7Z460 1538 aa11.62□□□□□ -0.55
SKA2-207ENST00000583380 RAB3GAP1Q15042 981 aa11.62□□□□□ -0.55
SKA2-207ENST00000583380 FAM184AQ8NB25 1140 aa11.62□□□□□ -0.55
SKA2-207ENST00000583380 NLRP1Q9C000 1473 aa11.62□□□□□ -0.55
SKA2-207ENST00000583380 UVSSAQ2YD98 709 aa11.61□□□□□ -0.55
SKA2-207ENST00000583380 BRMS1Q9HCU9 246 aa11.61□□□□□ -0.55
SKA2-207ENST00000583380 THOC2Q8NI27 1593 aaKnown RBP11.61□□□□□ -0.55
SKA2-207ENST00000583380 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 NPC1L1Q9UHC9 1359 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 TULP2O00295 520 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 PHF14O94880 888 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 APPP05067 770 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 DDIT3P35638 169 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 NUCB2P80303 420 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
SKA2-207ENST00000583380 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
SKA2-207ENST00000583380 GAPVD1Q14C86 1478 aa11.59□□□□□ -0.55
SKA2-207ENST00000583380 CALRP27797 417 aaKnown RBP11.59□□□□□ -0.55
SKA2-207ENST00000583380 SECISBP2LQ93073 1101 aaKnown RBP11.59□□□□□ -0.55
SKA2-207ENST00000583380 SYAP1Q96A49 352 aaPredicted RBP11.59□□□□□ -0.55
SKA2-207ENST00000583380 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
SKA2-207ENST00000583380 RAD50Q92878 1312 aa11.59□□□□□ -0.55
SKA2-207ENST00000583380 TEX14Q8IWB6 1497 aa11.58□□□□□ -0.56
SKA2-207ENST00000583380 GOLGA6L6A8MZA4 724 aa11.58□□□□□ -0.56
SKA2-207ENST00000583380 HMGB1P09429 215 aaKnown RBP11.58□□□□□ -0.56
SKA2-207ENST00000583380 CC2D1BQ5T0F9 858 aaKnown RBP11.58□□□□□ -0.56
SKA2-207ENST00000583380 CAVIN1Q6NZI2 390 aaKnown RBP11.58□□□□□ -0.56
SKA2-207ENST00000583380 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
SKA2-207ENST00000583380 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
SKA2-207ENST00000583380 PIBF1Q8WXW3 757 aa11.57□□□□□ -0.56
SKA2-207ENST00000583380 C22orf23Q9BZE7 217 aa11.57□□□□□ -0.56
SKA2-207ENST00000583380 RWDD1Q9H446 243 aaPredicted RBP11.57□□□□□ -0.56
SKA2-207ENST00000583380 PRDM10Q9NQV6 1147 aa11.57□□□□□ -0.56
SKA2-207ENST00000583380 CFAP65Q6ZU64 1925 aaKnown RBP11.56□□□□□ -0.56
SKA2-207ENST00000583380 ROCK1Q13464 1354 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 USP47Q96K76 1375 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 ANKRD30BQ9BXX2 1392 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 MBD3O95983 291 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 TNNT3P45378 269 aaPredicted RBP11.56□□□□□ -0.56
SKA2-207ENST00000583380 KCNJ4P48050 445 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 FHOD3Q2V2M9 1422 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 UHRF1BP1Q6BDS2 1440 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 GOLGA6L1Q8N7Z2 621 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 ANKRD7Q92527 254 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 KIF14Q15058 1648 aa11.56□□□□□ -0.56
SKA2-207ENST00000583380 TCOF1Q13428 1488 aaKnown RBP11.56□□□□□ -0.56
SKA2-207ENST00000583380 PLEKHH1Q9ULM0 1364 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 MCCP23508 829 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 CBX1P83916 185 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 RPAINQ86UA6 219 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 MNS1Q8NEH6 495 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 TNPO1Q92973 898 aaKnown RBP11.55□□□□□ -0.56
SKA2-207ENST00000583380 MPHOSPH9Q99550 1183 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 CHMP4AQ9BY43 222 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 CWC22Q9HCG8 908 aaKnown RBP11.55□□□□□ -0.56
SKA2-207ENST00000583380 SPTLC3Q9NUV7 552 aa11.55□□□□□ -0.56
SKA2-207ENST00000583380 DDX49Q9Y6V7 483 aaKnown RBP11.55□□□□□ -0.56
SKA2-207ENST00000583380 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
SKA2-207ENST00000583380 RBM28Q9NW13 759 aaKnown RBP11.54□□□□□ -0.56
SKA2-207ENST00000583380 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
SKA2-207ENST00000583380 EPRSP07814 1512 aaKnown RBP11.54□□□□□ -0.56
SKA2-207ENST00000583380 ATAD2Q6PL18 1390 aa11.54□□□□□ -0.56
SKA2-207ENST00000583380 GAS2L3Q86XJ1 694 aa11.53□□□□□ -0.56
SKA2-207ENST00000583380 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
SKA2-207ENST00000583380 MORC2Q9Y6X9 1032 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms