RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
RNF43-206ENST00000582293 NEXMIFQ5QGS0 1516 aa24.21■■□□□ 1.47
RNF43-206ENST00000582293 SPATA31E1Q6ZUB1 1445 aa24.21■■□□□ 1.47
RNF43-206ENST00000582293 EID1Q9Y6B2 187 aa24.19■■□□□ 1.46
RNF43-206ENST00000582293 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
RNF43-206ENST00000582293 NUTM2DQ5VT03 806 aaPredicted RBP24.17■■□□□ 1.46
RNF43-206ENST00000582293 DHX57Q6P158 1386 aaKnown RBP24.16■■□□□ 1.46
RNF43-206ENST00000582293 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
RNF43-206ENST00000582293 LTBP4Q8N2S1 1624 aa24.14■■□□□ 1.46
RNF43-206ENST00000582293 ZNF326Q5BKZ1 582 aaKnown RBP24.14■■□□□ 1.45
RNF43-206ENST00000582293 PPLO60437 1756 aa24.14■■□□□ 1.45
RNF43-206ENST00000582293 IFT172Q9UG01 1749 aa24.13■■□□□ 1.45
RNF43-206ENST00000582293 ZNF335Q9H4Z2 1342 aaPredicted RBP24.12■■□□□ 1.45
RNF43-206ENST00000582293 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.12■■□□□ 1.45
RNF43-206ENST00000582293 NRXN3Q9Y4C0 1643 aa24.12■■□□□ 1.45
RNF43-206ENST00000582293 ADAMTS13Q76LX8 1427 aa24.1■■□□□ 1.45
RNF43-206ENST00000582293 STRCP1A6NGW2 1772 aa24.09■■□□□ 1.45
RNF43-206ENST00000582293 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
RNF43-206ENST00000582293 SENP3Q9H4L4 574 aaPredicted RBP24.09■■□□□ 1.45
RNF43-206ENST00000582293 PPP1R15AO75807 674 aaPredicted RBP24.08■■□□□ 1.45
RNF43-206ENST00000582293 RGL3Q3MIN7 710 aa24.08■■□□□ 1.45
RNF43-206ENST00000582293 SLC26A8Q96RN1 970 aa24.08■■□□□ 1.45
RNF43-206ENST00000582293 RPGRIP1LQ68CZ1 1315 aa24.08■■□□□ 1.44
RNF43-206ENST00000582293 SETBP1Q9Y6X0 1596 aa24.08■■□□□ 1.44
RNF43-206ENST00000582293 DIP2AQ14689 1571 aa24.02■■□□□ 1.44
RNF43-206ENST00000582293 ADGRF5Q8IZF2 1346 aa24.02■■□□□ 1.44
RNF43-206ENST00000582293 SETD1AO15047 1707 aaKnown RBP24.01■■□□□ 1.43
RNF43-206ENST00000582293 TBX22Q9Y458 520 aa24.01■■□□□ 1.43
RNF43-206ENST00000582293 VGFO15240 615 aaPredicted RBP23.99■■□□□ 1.43
RNF43-206ENST00000582293 BCANQ96GW7 911 aa23.99■■□□□ 1.43
RNF43-206ENST00000582293 SIN3AQ96ST3 1273 aa23.99■■□□□ 1.43
RNF43-206ENST00000582293 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
RNF43-206ENST00000582293 MYOM2P54296 1465 aa23.98■■□□□ 1.43
RNF43-206ENST00000582293 NRXN1Q9ULB1 1477 aa23.98■■□□□ 1.43
RNF43-206ENST00000582293 CHD2O14647 1828 aaKnown RBP23.97■■□□□ 1.43
RNF43-206ENST00000582293 CPS1P31327 1500 aa23.97■■□□□ 1.43
RNF43-206ENST00000582293 ALKQ9UM73 1620 aa23.96■■□□□ 1.43
RNF43-206ENST00000582293 PTPRUQ92729 1446 aa23.96■■□□□ 1.43
RNF43-206ENST00000582293 CERKQ8TCT0 537 aa23.96■■□□□ 1.43
RNF43-206ENST00000582293 PIK3C2GO75747 1445 aa23.95■■□□□ 1.42
RNF43-206ENST00000582293 METP08581 1390 aa23.95■■□□□ 1.42
RNF43-206ENST00000582293 KCNA6P17658 529 aa23.94■■□□□ 1.42
RNF43-206ENST00000582293 LRRC7Q96NW7 1537 aa23.93■■□□□ 1.42
RNF43-206ENST00000582293 PIK3R4Q99570 1358 aa23.92■■□□□ 1.42
RNF43-206ENST00000582293 ASXL1Q8IXJ9 1541 aa23.9■■□□□ 1.42
RNF43-206ENST00000582293 XIRP1Q702N8 1843 aaKnown RBP23.9■■□□□ 1.42
RNF43-206ENST00000582293 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
RNF43-206ENST00000582293 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.41
RNF43-206ENST00000582293 NKTRP30414 1462 aaKnown RBP23.88■■□□□ 1.41
RNF43-206ENST00000582293 IQSEC2Q5JU85 1478 aa23.88■■□□□ 1.41
RNF43-206ENST00000582293 NEUROD1Q13562 356 aa23.87■■□□□ 1.41
RNF43-206ENST00000582293 KDM2AQ9Y2K7 1162 aa23.86■■□□□ 1.41
RNF43-206ENST00000582293 C14orf93Q9H972 538 aaKnown RBP23.84■■□□□ 1.41
RNF43-206ENST00000582293 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
RNF43-206ENST00000582293 L3MBTL2Q969R5 705 aa23.83■■□□□ 1.41
RNF43-206ENST00000582293 LAMC1P11047 1609 aa23.82■■□□□ 1.4
RNF43-206ENST00000582293 CFAP70Q5T0N1 1121 aa23.82■■□□□ 1.4
RNF43-206ENST00000582293 RBM33Q96EV2 1170 aaKnown RBP23.82■■□□□ 1.4
RNF43-206ENST00000582293 TMEM94Q12767 1356 aa23.81■■□□□ 1.4
RNF43-206ENST00000582293 STAC3Q96MF2 364 aa23.81■■□□□ 1.4
RNF43-206ENST00000582293 PRAG1Q86YV5 1406 aa23.81■■□□□ 1.4
RNF43-206ENST00000582293 ADGRB1O14514 1584 aa23.79■■□□□ 1.4
RNF43-206ENST00000582293 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
RNF43-206ENST00000582293 PROSER2Q86WR7 435 aaPredicted RBP23.78■■□□□ 1.4
RNF43-206ENST00000582293 LRPPRCP42704 1394 aaKnown RBP23.75■■□□□ 1.39
RNF43-206ENST00000582293 ROBO2Q9HCK4 1378 aa23.75■■□□□ 1.39
RNF43-206ENST00000582293 TECPR2O15040 1411 aa23.75■■□□□ 1.39
RNF43-206ENST00000582293 PTCH1Q13635 1447 aa23.75■■□□□ 1.39
RNF43-206ENST00000582293 KNDC1Q76NI1 1749 aa23.74■■□□□ 1.39
RNF43-206ENST00000582293 YTHDC2Q9H6S0 1430 aaKnown RBP23.74■■□□□ 1.39
RNF43-206ENST00000582293 KIAA1210Q9ULL0 1709 aa23.73■■□□□ 1.39
RNF43-206ENST00000582293 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
RNF43-206ENST00000582293 NCOA3Q9Y6Q9 1424 aa23.72■■□□□ 1.39
RNF43-206ENST00000582293 ABCC11Q96J66 1382 aa23.71■■□□□ 1.39
RNF43-206ENST00000582293 FBXO41Q8TF61 875 aa23.71■■□□□ 1.39
RNF43-206ENST00000582293 STK26Q9P289 416 aa23.69■■□□□ 1.38
RNF43-206ENST00000582293 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
RNF43-206ENST00000582293 NALCNQ8IZF0 1738 aa23.68■■□□□ 1.38
RNF43-206ENST00000582293 TRPM1Q7Z4N2 1603 aa23.67■■□□□ 1.38
RNF43-206ENST00000582293 NBPF1Q3BBV0 1214 aa23.67■■□□□ 1.38
RNF43-206ENST00000582293 NBPF8Q3BBV2 869 aa23.67■■□□□ 1.38
RNF43-206ENST00000582293 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.67■■□□□ 1.38
RNF43-206ENST00000582293 PLEKHH1Q9ULM0 1364 aa23.66■■□□□ 1.38
RNF43-206ENST00000582293 UBAP1LF5GYI3 381 aa23.66■■□□□ 1.38
RNF43-206ENST00000582293 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
RNF43-206ENST00000582293 DLC1Q96QB1 1528 aa23.64■■□□□ 1.38
RNF43-206ENST00000582293 WAPLQ7Z5K2 1190 aa23.64■■□□□ 1.37
RNF43-206ENST00000582293 ILDR1Q86SU0 546 aaPredicted RBP23.64■■□□□ 1.37
RNF43-206ENST00000582293 ADGRL3Q9HAR2 1447 aa23.64■■□□□ 1.37
RNF43-206ENST00000582293 MSH6P52701 1360 aa23.64■■□□□ 1.37
RNF43-206ENST00000582293 FAM135BQ49AJ0 1406 aa23.62■■□□□ 1.37
RNF43-206ENST00000582293 SIRT1Q96EB6 747 aa23.62■■□□□ 1.37
RNF43-206ENST00000582293 ARHGEF28Q8N1W1 1705 aaKnown RBP23.6■■□□□ 1.37
RNF43-206ENST00000582293 TOM1O60784 492 aa23.6■■□□□ 1.37
RNF43-206ENST00000582293 C19orf44Q9H6X5 657 aa23.6■■□□□ 1.37
RNF43-206ENST00000582293 TRAK1Q9UPV9 953 aa23.59■■□□□ 1.37
RNF43-206ENST00000582293 C14orf37Q86TY3 774 aa23.58■■□□□ 1.37
RNF43-206ENST00000582293 DCCP43146 1447 aa23.58■■□□□ 1.36
RNF43-206ENST00000582293 PRAM1Q96QH2 718 aa23.56■■□□□ 1.36
RNF43-206ENST00000582293 RALGAPBQ86X10 1494 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms