RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 TMEM2Q9UHN6 1383 aa20.03■□□□□ 0.8
CSNK1D-209ENST00000578904 ARHGAP23Q9P227 1491 aa20.02■□□□□ 0.8
CSNK1D-209ENST00000578904 RIMS2Q9UQ26 1411 aa20.01■□□□□ 0.79
CSNK1D-209ENST00000578904 NEXMIFQ5QGS0 1516 aa19.99■□□□□ 0.79
CSNK1D-209ENST00000578904 SOCS7O14512 581 aa19.99■□□□□ 0.79
CSNK1D-209ENST00000578904 RGL3Q3MIN7 710 aa19.99■□□□□ 0.79
CSNK1D-209ENST00000578904 ILDR2Q71H61 639 aa19.99■□□□□ 0.79
CSNK1D-209ENST00000578904 ZFYVE9O95405 1425 aa19.99■□□□□ 0.79
CSNK1D-209ENST00000578904 POLR1AO95602 1720 aaPredicted RBP19.99■□□□□ 0.79
CSNK1D-209ENST00000578904 SCAF11Q99590 1463 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-209ENST00000578904 EID1Q9Y6B2 187 aa19.98■□□□□ 0.79
CSNK1D-209ENST00000578904 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
CSNK1D-209ENST00000578904 PPP1R15AO75807 674 aaPredicted RBP19.96■□□□□ 0.79
CSNK1D-209ENST00000578904 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
CSNK1D-209ENST00000578904 RPGRIP1LQ68CZ1 1315 aa19.96■□□□□ 0.79
CSNK1D-209ENST00000578904 DISP3Q9P2K9 1392 aa19.95■□□□□ 0.79
CSNK1D-209ENST00000578904 PPLO60437 1756 aa19.95■□□□□ 0.78
CSNK1D-209ENST00000578904 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
CSNK1D-209ENST00000578904 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
CSNK1D-209ENST00000578904 IFT172Q9UG01 1749 aa19.95■□□□□ 0.78
CSNK1D-209ENST00000578904 NUTM2DQ5VT03 806 aaPredicted RBP19.94■□□□□ 0.78
CSNK1D-209ENST00000578904 NCKAP5LQ9HCH0 1330 aa19.94■□□□□ 0.78
CSNK1D-209ENST00000578904 STRCQ7RTU9 1775 aa19.93■□□□□ 0.78
CSNK1D-209ENST00000578904 LTKP29376 864 aa19.93■□□□□ 0.78
CSNK1D-209ENST00000578904 NPHP4O75161 1426 aaPredicted RBP19.9■□□□□ 0.78
CSNK1D-209ENST00000578904 MED14O60244 1454 aa19.9■□□□□ 0.78
CSNK1D-209ENST00000578904 MYOM2P54296 1465 aa19.9■□□□□ 0.78
CSNK1D-209ENST00000578904 IQGAP1P46940 1657 aa19.9■□□□□ 0.78
CSNK1D-209ENST00000578904 DCAF11Q8TEB1 546 aa19.89■□□□□ 0.77
CSNK1D-209ENST00000578904 STAC3Q96MF2 364 aa19.89■□□□□ 0.77
CSNK1D-209ENST00000578904 PLEKHG1Q9ULL1 1385 aa19.89■□□□□ 0.77
CSNK1D-209ENST00000578904 VGFO15240 615 aaPredicted RBP19.88■□□□□ 0.77
CSNK1D-209ENST00000578904 L3MBTL2Q969R5 705 aa19.88■□□□□ 0.77
CSNK1D-209ENST00000578904 BCANQ96GW7 911 aa19.88■□□□□ 0.77
CSNK1D-209ENST00000578904 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
CSNK1D-209ENST00000578904 KDM2AQ9Y2K7 1162 aa19.86■□□□□ 0.77
CSNK1D-209ENST00000578904 ADGRF5Q8IZF2 1346 aa19.85■□□□□ 0.77
CSNK1D-209ENST00000578904 SETBP1Q9Y6X0 1596 aa19.85■□□□□ 0.77
CSNK1D-209ENST00000578904 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.77
CSNK1D-209ENST00000578904 NRXN1Q9ULB1 1477 aa19.83■□□□□ 0.76
CSNK1D-209ENST00000578904 PIK3C2GO75747 1445 aa19.83■□□□□ 0.76
CSNK1D-209ENST00000578904 NRXN3Q9Y4C0 1643 aa19.83■□□□□ 0.76
CSNK1D-209ENST00000578904 DIP2AQ14689 1571 aa19.82■□□□□ 0.76
CSNK1D-209ENST00000578904 ADAMTS13Q76LX8 1427 aa19.8■□□□□ 0.76
CSNK1D-209ENST00000578904 SLC26A8Q96RN1 970 aa19.79■□□□□ 0.76
CSNK1D-209ENST00000578904 PRAG1Q86YV5 1406 aa19.78■□□□□ 0.76
CSNK1D-209ENST00000578904 LAMC1P11047 1609 aa19.78■□□□□ 0.76
CSNK1D-209ENST00000578904 ALKQ9UM73 1620 aa19.77■□□□□ 0.76
CSNK1D-209ENST00000578904 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
CSNK1D-209ENST00000578904 TBX22Q9Y458 520 aa19.74■□□□□ 0.75
CSNK1D-209ENST00000578904 CFAP70Q5T0N1 1121 aa19.72■□□□□ 0.75
CSNK1D-209ENST00000578904 KIAA1210Q9ULL0 1709 aa19.71■□□□□ 0.75
CSNK1D-209ENST00000578904 C14orf93Q9H972 538 aaKnown RBP19.71■□□□□ 0.75
CSNK1D-209ENST00000578904 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
CSNK1D-209ENST00000578904 METP08581 1390 aa19.7■□□□□ 0.74
CSNK1D-209ENST00000578904 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
CSNK1D-209ENST00000578904 TRPM1Q7Z4N2 1603 aa19.69■□□□□ 0.74
CSNK1D-209ENST00000578904 NWD1Q149M9 1564 aa19.69■□□□□ 0.74
CSNK1D-209ENST00000578904 NBPF8Q3BBV2 869 aa19.68■□□□□ 0.74
CSNK1D-209ENST00000578904 ZNF335Q9H4Z2 1342 aaPredicted RBP19.68■□□□□ 0.74
CSNK1D-209ENST00000578904 ADGRB1O14514 1584 aa19.67■□□□□ 0.74
CSNK1D-209ENST00000578904 CHD2O14647 1828 aaKnown RBP19.67■□□□□ 0.74
CSNK1D-209ENST00000578904 PTPRUQ92729 1446 aa19.67■□□□□ 0.74
CSNK1D-209ENST00000578904 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
CSNK1D-209ENST00000578904 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
CSNK1D-209ENST00000578904 XRN1Q8IZH2 1706 aaKnown RBP19.65■□□□□ 0.74
CSNK1D-209ENST00000578904 ROCK2O75116 1388 aaKnown RBP19.65■□□□□ 0.74
CSNK1D-209ENST00000578904 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
CSNK1D-209ENST00000578904 KCNA6P17658 529 aa19.64■□□□□ 0.73
CSNK1D-209ENST00000578904 YTHDC2Q9H6S0 1430 aaKnown RBP19.64■□□□□ 0.73
CSNK1D-209ENST00000578904 NKTRP30414 1462 aaKnown RBP19.64■□□□□ 0.73
CSNK1D-209ENST00000578904 STRCP1A6NGW2 1772 aa19.64■□□□□ 0.73
CSNK1D-209ENST00000578904 LRPPRCP42704 1394 aaKnown RBP19.63■□□□□ 0.73
CSNK1D-209ENST00000578904 AMOTL2Q9Y2J4 779 aa19.63■□□□□ 0.73
CSNK1D-209ENST00000578904 KNDC1Q76NI1 1749 aa19.62■□□□□ 0.73
CSNK1D-209ENST00000578904 CPS1P31327 1500 aa19.62■□□□□ 0.73
CSNK1D-209ENST00000578904 EIF4G2P78344 907 aaKnown RBP eCLIP19.62■□□□□ 0.73
CSNK1D-209ENST00000578904 NBPF1Q3BBV0 1214 aa19.62■□□□□ 0.73
CSNK1D-209ENST00000578904 STK26Q9P289 416 aa19.62■□□□□ 0.73
CSNK1D-209ENST00000578904 PTCH1Q13635 1447 aa19.6■□□□□ 0.73
CSNK1D-209ENST00000578904 LTBP4Q8N2S1 1624 aa19.6■□□□□ 0.73
CSNK1D-209ENST00000578904 TECPR2O15040 1411 aa19.59■□□□□ 0.73
CSNK1D-209ENST00000578904 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
CSNK1D-209ENST00000578904 GPRASP1Q5JY77 1395 aa19.58■□□□□ 0.73
CSNK1D-209ENST00000578904 ABCC11Q96J66 1382 aa19.58■□□□□ 0.73
CSNK1D-209ENST00000578904 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
CSNK1D-209ENST00000578904 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
CSNK1D-209ENST00000578904 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
CSNK1D-209ENST00000578904 LRRC7Q96NW7 1537 aa19.56■□□□□ 0.72
CSNK1D-209ENST00000578904 PROSER2Q86WR7 435 aaPredicted RBP19.55■□□□□ 0.72
CSNK1D-209ENST00000578904 ARHGEF28Q8N1W1 1705 aaKnown RBP19.55■□□□□ 0.72
CSNK1D-209ENST00000578904 FAM135BQ49AJ0 1406 aa19.53■□□□□ 0.72
CSNK1D-209ENST00000578904 TMEM94Q12767 1356 aa19.53■□□□□ 0.72
CSNK1D-209ENST00000578904 EIF3AQ14152 1382 aaKnown RBP19.52■□□□□ 0.72
CSNK1D-209ENST00000578904 RBM33Q96EV2 1170 aaKnown RBP19.51■□□□□ 0.71
CSNK1D-209ENST00000578904 PRAM1Q96QH2 718 aa19.51■□□□□ 0.71
CSNK1D-209ENST00000578904 USP47Q96K76 1375 aa19.51■□□□□ 0.71
CSNK1D-209ENST00000578904 IQSEC2Q5JU85 1478 aa19.5■□□□□ 0.71
CSNK1D-209ENST00000578904 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
CSNK1D-209ENST00000578904 HSPA5P11021 654 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms