RNA–Protein interactions for RNA: ENST00000578567.1

CCDC58P1-201, Transcript of coiled-coil domain containing 58 pseudogene 1, humanhuman

BASIC

Gene CCDC58P1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P1-201ENST00000578567 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
CCDC58P1-201ENST00000578567 LTKP29376 864 aa12.73□□□□□ -0.37
CCDC58P1-201ENST00000578567 ATP1B4Q9UN42 357 aaPredicted RBP12.73□□□□□ -0.37
CCDC58P1-201ENST00000578567 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
CCDC58P1-201ENST00000578567 SCAF11Q99590 1463 aaKnown RBP12.72□□□□□ -0.37
CCDC58P1-201ENST00000578567 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
CCDC58P1-201ENST00000578567 QTRT2Q9H974 415 aaKnown RBP12.72□□□□□ -0.37
CCDC58P1-201ENST00000578567 CDC42BPAQ5VT25 1732 aa12.71□□□□□ -0.38
CCDC58P1-201ENST00000578567 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
CCDC58P1-201ENST00000578567 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
CCDC58P1-201ENST00000578567 ZNF777Q9ULD5 760 aaPredicted RBP12.69□□□□□ -0.38
CCDC58P1-201ENST00000578567 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
CCDC58P1-201ENST00000578567 KCNA6P17658 529 aa12.68□□□□□ -0.38
CCDC58P1-201ENST00000578567 CCDC125Q86Z20 511 aa12.68□□□□□ -0.38
CCDC58P1-201ENST00000578567 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
CCDC58P1-201ENST00000578567 PRDM15P57071 1507 aaPredicted RBP12.67□□□□□ -0.38
CCDC58P1-201ENST00000578567 YY1P25490 414 aa12.67□□□□□ -0.38
CCDC58P1-201ENST00000578567 TXNDC2Q86VQ3 553 aa12.67□□□□□ -0.38
CCDC58P1-201ENST00000578567 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
CCDC58P1-201ENST00000578567 WASHC2CQ9Y4E1 1318 aa12.66□□□□□ -0.38
CCDC58P1-201ENST00000578567 UBR1Q8IWV7 1749 aa12.66□□□□□ -0.38
CCDC58P1-201ENST00000578567 LRRIQ1Q96JM4 1722 aa12.66□□□□□ -0.38
CCDC58P1-201ENST00000578567 SLIT1O75093 1534 aa12.66□□□□□ -0.38
CCDC58P1-201ENST00000578567 MSH6P52701 1360 aa12.66□□□□□ -0.38
CCDC58P1-201ENST00000578567 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
CCDC58P1-201ENST00000578567 DIP2AQ14689 1571 aa12.65□□□□□ -0.38
CCDC58P1-201ENST00000578567 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
CCDC58P1-201ENST00000578567 AHDC1Q5TGY3 1603 aaPredicted RBP12.65□□□□□ -0.38
CCDC58P1-201ENST00000578567 DHX29Q7Z478 1369 aaKnown RBP12.65□□□□□ -0.38
CCDC58P1-201ENST00000578567 KIF3BO15066 747 aa12.64□□□□□ -0.39
CCDC58P1-201ENST00000578567 NGLY1Q96IV0 654 aa12.63□□□□□ -0.39
CCDC58P1-201ENST00000578567 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
CCDC58P1-201ENST00000578567 ABCC3O15438 1527 aa12.62□□□□□ -0.39
CCDC58P1-201ENST00000578567 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
CCDC58P1-201ENST00000578567 NWD1Q149M9 1564 aa12.61□□□□□ -0.39
CCDC58P1-201ENST00000578567 NHSL1Q5SYE7 1610 aa12.61□□□□□ -0.39
CCDC58P1-201ENST00000578567 NKTRP30414 1462 aaKnown RBP12.6□□□□□ -0.39
CCDC58P1-201ENST00000578567 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
CCDC58P1-201ENST00000578567 GPATCH8Q9UKJ3 1502 aaKnown RBP12.6□□□□□ -0.39
CCDC58P1-201ENST00000578567 KDM5AP29375 1690 aaKnown RBP12.6□□□□□ -0.39
CCDC58P1-201ENST00000578567 EP400Q96L91 3159 aa12.59□□□□□ -0.39
CCDC58P1-201ENST00000578567 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
CCDC58P1-201ENST00000578567 PLEKHH2Q8IVE3 1493 aa12.59□□□□□ -0.39
CCDC58P1-201ENST00000578567 TET3O43151 1660 aa12.58□□□□□ -0.4
CCDC58P1-201ENST00000578567 EID1Q9Y6B2 187 aa12.58□□□□□ -0.4
CCDC58P1-201ENST00000578567 RTEL1-TNFRSF6BF6WH68 1400 aa12.57□□□□□ -0.4
CCDC58P1-201ENST00000578567 HRCP23327 699 aa12.57□□□□□ -0.4
CCDC58P1-201ENST00000578567 SLC26A8Q96RN1 970 aa12.56□□□□□ -0.4
CCDC58P1-201ENST00000578567 DEFB132Q7Z7B7 95 aa12.55□□□□□ -0.4
CCDC58P1-201ENST00000578567 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
CCDC58P1-201ENST00000578567 BCL9LQ86UU0 1499 aa12.54□□□□□ -0.4
CCDC58P1-201ENST00000578567 TMEM2Q9UHN6 1383 aa12.54□□□□□ -0.4
CCDC58P1-201ENST00000578567 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
CCDC58P1-201ENST00000578567 PSDA5PKW4 1024 aaPredicted RBP12.53□□□□□ -0.4
CCDC58P1-201ENST00000578567 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
CCDC58P1-201ENST00000578567 BLMP54132 1417 aaPredicted RBP12.53□□□□□ -0.4
CCDC58P1-201ENST00000578567 MBD5Q9P267 1494 aa12.53□□□□□ -0.4
CCDC58P1-201ENST00000578567 MAST1Q9Y2H9 1570 aa12.52□□□□□ -0.4
CCDC58P1-201ENST00000578567 GABBR2O75899 941 aa12.52□□□□□ -0.41
CCDC58P1-201ENST00000578567 BRINP3Q76B58 766 aa12.52□□□□□ -0.41
CCDC58P1-201ENST00000578567 CFDP1Q9UEE9 299 aaPredicted RBP12.52□□□□□ -0.41
CCDC58P1-201ENST00000578567 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.41
CCDC58P1-201ENST00000578567 NCOA3Q9Y6Q9 1424 aa12.51□□□□□ -0.41
CCDC58P1-201ENST00000578567 CAMSAP2Q08AD1 1489 aa12.51□□□□□ -0.41
CCDC58P1-201ENST00000578567 ARHGAP35Q9NRY4 1499 aa12.51□□□□□ -0.41
CCDC58P1-201ENST00000578567 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
CCDC58P1-201ENST00000578567 USP21Q9UK80 565 aa12.5□□□□□ -0.41
CCDC58P1-201ENST00000578567 ATRNO75882 1429 aa12.5□□□□□ -0.41
CCDC58P1-201ENST00000578567 CFAP65Q6ZU64 1925 aaKnown RBP12.5□□□□□ -0.41
CCDC58P1-201ENST00000578567 ZNF644Q9H582 1327 aaPredicted RBP12.49□□□□□ -0.41
CCDC58P1-201ENST00000578567 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
CCDC58P1-201ENST00000578567 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.48□□□□□ -0.41
CCDC58P1-201ENST00000578567 PNPLA6Q8IY17 1366 aa12.48□□□□□ -0.41
CCDC58P1-201ENST00000578567 LRRC59Q96AG4 307 aaKnown RBP12.48□□□□□ -0.41
CCDC58P1-201ENST00000578567 CHD2O14647 1828 aaKnown RBP12.47□□□□□ -0.41
CCDC58P1-201ENST00000578567 PROM2Q8N271 834 aa12.47□□□□□ -0.41
CCDC58P1-201ENST00000578567 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
CCDC58P1-201ENST00000578567 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
CCDC58P1-201ENST00000578567 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.41
CCDC58P1-201ENST00000578567 C19orf44Q9H6X5 657 aa12.46□□□□□ -0.41
CCDC58P1-201ENST00000578567 PIK3C2BO00750 1634 aa12.46□□□□□ -0.41
CCDC58P1-201ENST00000578567 MROH1Q8NDA8 1641 aa12.46□□□□□ -0.41
CCDC58P1-201ENST00000578567 ATF3P18847 181 aa12.44□□□□□ -0.42
CCDC58P1-201ENST00000578567 CLCN6P51797 869 aa12.44□□□□□ -0.42
CCDC58P1-201ENST00000578567 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
CCDC58P1-201ENST00000578567 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
CCDC58P1-201ENST00000578567 C1QTNF8P60827 252 aa12.41□□□□□ -0.42
CCDC58P1-201ENST00000578567 SF3B2Q13435 895 aaKnown RBP12.41□□□□□ -0.42
CCDC58P1-201ENST00000578567 C14orf37Q86TY3 774 aa12.41□□□□□ -0.42
CCDC58P1-201ENST00000578567 ZNF784Q8NCA9 323 aaPredicted RBP12.41□□□□□ -0.42
CCDC58P1-201ENST00000578567 EFCAB6Q5THR3 1501 aa12.41□□□□□ -0.42
CCDC58P1-201ENST00000578567 CEP152O94986 1710 aa12.4□□□□□ -0.42
CCDC58P1-201ENST00000578567 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.42
CCDC58P1-201ENST00000578567 UNC13BO14795 1591 aa12.39□□□□□ -0.43
CCDC58P1-201ENST00000578567 DDX17Q92841 729 aaKnown RBP12.39□□□□□ -0.43
CCDC58P1-201ENST00000578567 GJD4Q96KN9 370 aaPredicted RBP12.39□□□□□ -0.43
CCDC58P1-201ENST00000578567 ARHGAP31Q2M1Z3 1444 aa12.38□□□□□ -0.43
CCDC58P1-201ENST00000578567 IDI1Q13907 227 aa12.37□□□□□ -0.43
CCDC58P1-201ENST00000578567 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
CCDC58P1-201ENST00000578567 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms