RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 NEXMIFQ5QGS0 1516 aa12.33□□□□□ -0.44
PRPF8-213ENST00000576407 L3MBTL2Q969R5 705 aa12.33□□□□□ -0.44
PRPF8-213ENST00000576407 ZFYVE9O95405 1425 aa12.33□□□□□ -0.44
PRPF8-213ENST00000576407 RPGRIP1LQ68CZ1 1315 aa12.33□□□□□ -0.44
PRPF8-213ENST00000576407 ARHGAP23Q9P227 1491 aa12.33□□□□□ -0.44
PRPF8-213ENST00000576407 IFT172Q9UG01 1749 aa12.32□□□□□ -0.44
PRPF8-213ENST00000576407 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
PRPF8-213ENST00000576407 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
PRPF8-213ENST00000576407 PPLO60437 1756 aa12.32□□□□□ -0.44
PRPF8-213ENST00000576407 HSPA2P54652 639 aa12.31□□□□□ -0.44
PRPF8-213ENST00000576407 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
PRPF8-213ENST00000576407 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
PRPF8-213ENST00000576407 KDM2AQ9Y2K7 1162 aa12.3□□□□□ -0.44
PRPF8-213ENST00000576407 VGFO15240 615 aaPredicted RBP12.29□□□□□ -0.44
PRPF8-213ENST00000576407 LTKP29376 864 aa12.29□□□□□ -0.44
PRPF8-213ENST00000576407 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
PRPF8-213ENST00000576407 TXNDC2Q86VQ3 553 aa12.29□□□□□ -0.44
PRPF8-213ENST00000576407 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRPF8-213ENST00000576407 EID1Q9Y6B2 187 aa12.29□□□□□ -0.44
PRPF8-213ENST00000576407 MYOM2P54296 1465 aa12.28□□□□□ -0.44
PRPF8-213ENST00000576407 SCAF11Q99590 1463 aaKnown RBP12.28□□□□□ -0.44
PRPF8-213ENST00000576407 PPP1R15AO75807 674 aaPredicted RBP12.28□□□□□ -0.44
PRPF8-213ENST00000576407 ANKLE2Q86XL3 938 aa12.28□□□□□ -0.44
PRPF8-213ENST00000576407 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
PRPF8-213ENST00000576407 ADGRF5Q8IZF2 1346 aa12.28□□□□□ -0.44
PRPF8-213ENST00000576407 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.45
PRPF8-213ENST00000576407 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
PRPF8-213ENST00000576407 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
PRPF8-213ENST00000576407 SENP3Q9H4L4 574 aaPredicted RBP12.25□□□□□ -0.45
PRPF8-213ENST00000576407 PLEKHG1Q9ULL1 1385 aa12.25□□□□□ -0.45
PRPF8-213ENST00000576407 PIK3C2GO75747 1445 aa12.25□□□□□ -0.45
PRPF8-213ENST00000576407 MED14O60244 1454 aa12.24□□□□□ -0.45
PRPF8-213ENST00000576407 STRCQ7RTU9 1775 aa12.24□□□□□ -0.45
PRPF8-213ENST00000576407 PRAG1Q86YV5 1406 aa12.24□□□□□ -0.45
PRPF8-213ENST00000576407 SETBP1Q9Y6X0 1596 aa12.23□□□□□ -0.45
PRPF8-213ENST00000576407 NBPF8Q3BBV2 869 aa12.23□□□□□ -0.45
PRPF8-213ENST00000576407 IQGAP1P46940 1657 aa12.22□□□□□ -0.45
PRPF8-213ENST00000576407 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
PRPF8-213ENST00000576407 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
PRPF8-213ENST00000576407 BCANQ96GW7 911 aa12.22□□□□□ -0.45
PRPF8-213ENST00000576407 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.45
PRPF8-213ENST00000576407 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
PRPF8-213ENST00000576407 ALKQ9UM73 1620 aa12.2□□□□□ -0.46
PRPF8-213ENST00000576407 CFAP70Q5T0N1 1121 aa12.2□□□□□ -0.46
PRPF8-213ENST00000576407 SLC26A8Q96RN1 970 aa12.2□□□□□ -0.46
PRPF8-213ENST00000576407 C14orf93Q9H972 538 aaKnown RBP12.2□□□□□ -0.46
PRPF8-213ENST00000576407 LAMC1P11047 1609 aa12.19□□□□□ -0.46
PRPF8-213ENST00000576407 TRPM1Q7Z4N2 1603 aa12.19□□□□□ -0.46
PRPF8-213ENST00000576407 SETD1AO15047 1707 aaKnown RBP12.19□□□□□ -0.46
PRPF8-213ENST00000576407 KIAA1210Q9ULL0 1709 aa12.19□□□□□ -0.46
PRPF8-213ENST00000576407 DIP2AQ14689 1571 aa12.18□□□□□ -0.46
PRPF8-213ENST00000576407 TBX22Q9Y458 520 aa12.18□□□□□ -0.46
PRPF8-213ENST00000576407 RALGAPBQ86X10 1494 aa12.17□□□□□ -0.46
PRPF8-213ENST00000576407 NBPF1Q3BBV0 1214 aa12.17□□□□□ -0.46
PRPF8-213ENST00000576407 METP08581 1390 aa12.17□□□□□ -0.46
PRPF8-213ENST00000576407 TMEM132EQ6IEE7 984 aa12.16□□□□□ -0.46
PRPF8-213ENST00000576407 DMRT2Q9Y5R5 561 aa12.16□□□□□ -0.46
PRPF8-213ENST00000576407 ADGRB1O14514 1584 aa12.16□□□□□ -0.46
PRPF8-213ENST00000576407 ROCK2O75116 1388 aaKnown RBP12.16□□□□□ -0.46
PRPF8-213ENST00000576407 ASXL1Q8IXJ9 1541 aa12.16□□□□□ -0.46
PRPF8-213ENST00000576407 GPRASP1Q5JY77 1395 aa12.14□□□□□ -0.47
PRPF8-213ENST00000576407 PIK3R4Q99570 1358 aa12.13□□□□□ -0.47
PRPF8-213ENST00000576407 PTPRUQ92729 1446 aa12.12□□□□□ -0.47
PRPF8-213ENST00000576407 YTHDC2Q9H6S0 1430 aaKnown RBP12.12□□□□□ -0.47
PRPF8-213ENST00000576407 CARD11Q9BXL7 1154 aa12.12□□□□□ -0.47
PRPF8-213ENST00000576407 CHD2O14647 1828 aaKnown RBP12.11□□□□□ -0.47
PRPF8-213ENST00000576407 LRPPRCP42704 1394 aaKnown RBP12.11□□□□□ -0.47
PRPF8-213ENST00000576407 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
PRPF8-213ENST00000576407 STK26Q9P289 416 aa12.11□□□□□ -0.47
PRPF8-213ENST00000576407 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
PRPF8-213ENST00000576407 XRN1Q8IZH2 1706 aaKnown RBP12.1□□□□□ -0.47
PRPF8-213ENST00000576407 NWD1Q149M9 1564 aa12.09□□□□□ -0.47
PRPF8-213ENST00000576407 ABCC11Q96J66 1382 aa12.09□□□□□ -0.47
PRPF8-213ENST00000576407 KCNA6P17658 529 aa12.09□□□□□ -0.47
PRPF8-213ENST00000576407 TRAK1Q9UPV9 953 aa12.09□□□□□ -0.47
PRPF8-213ENST00000576407 TECPR2O15040 1411 aa12.09□□□□□ -0.47
PRPF8-213ENST00000576407 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.47
PRPF8-213ENST00000576407 STRCP1A6NGW2 1772 aa12.08□□□□□ -0.48
PRPF8-213ENST00000576407 ZNF335Q9H4Z2 1342 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-213ENST00000576407 ROBO2Q9HCK4 1378 aa12.07□□□□□ -0.48
PRPF8-213ENST00000576407 CPS1P31327 1500 aa12.07□□□□□ -0.48
PRPF8-213ENST00000576407 DLC1Q96QB1 1528 aa12.07□□□□□ -0.48
PRPF8-213ENST00000576407 ARHGEF28Q8N1W1 1705 aaKnown RBP12.07□□□□□ -0.48
PRPF8-213ENST00000576407 USP47Q96K76 1375 aa12.06□□□□□ -0.48
PRPF8-213ENST00000576407 PTCH1Q13635 1447 aa12.06□□□□□ -0.48
PRPF8-213ENST00000576407 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
PRPF8-213ENST00000576407 EIF3AQ14152 1382 aaKnown RBP12.05□□□□□ -0.48
PRPF8-213ENST00000576407 FAM135BQ49AJ0 1406 aa12.05□□□□□ -0.48
PRPF8-213ENST00000576407 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
PRPF8-213ENST00000576407 PRAM1Q96QH2 718 aa12.05□□□□□ -0.48
PRPF8-213ENST00000576407 PLEKHH1Q9ULM0 1364 aa12.05□□□□□ -0.48
PRPF8-213ENST00000576407 EIF4G2P78344 907 aaKnown RBP eCLIP12.04□□□□□ -0.48
PRPF8-213ENST00000576407 WAPLQ7Z5K2 1190 aa12.04□□□□□ -0.48
PRPF8-213ENST00000576407 POGKQ9P215 609 aa12.04□□□□□ -0.48
PRPF8-213ENST00000576407 ST20-MTHFSA0A0A6YYL1 179 aa12.03□□□□□ -0.48
PRPF8-213ENST00000576407 HSPA5P11021 654 aaKnown RBP12.03□□□□□ -0.48
PRPF8-213ENST00000576407 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
PRPF8-213ENST00000576407 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
PRPF8-213ENST00000576407 CENPJQ9HC77 1338 aaPredicted RBP12.03□□□□□ -0.48
PRPF8-213ENST00000576407 LTBP4Q8N2S1 1624 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms