RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 HRCP23327 699 aa31.28■■■□□ 2.6
ABR-221ENST00000573559 ZNF326Q5BKZ1 582 aaKnown RBP31.27■■■□□ 2.6
ABR-221ENST00000573559 LTBP4Q8N2S1 1624 aa31.27■■■□□ 2.6
ABR-221ENST00000573559 HDGFP51858 240 aaKnown RBP31.26■■■□□ 2.59
ABR-221ENST00000573559 CCDC144AA2RUR9 1427 aa31.24■■■□□ 2.59
ABR-221ENST00000573559 NUTM2DQ5VT03 806 aaPredicted RBP31.24■■■□□ 2.59
ABR-221ENST00000573559 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.24■■■□□ 2.59
ABR-221ENST00000573559 BCANQ96GW7 911 aa31.24■■■□□ 2.59
ABR-221ENST00000573559 SENP3Q9H4L4 574 aaPredicted RBP31.24■■■□□ 2.59
ABR-221ENST00000573559 TRIM26Q12899 539 aaPredicted RBP31.23■■■□□ 2.59
ABR-221ENST00000573559 CERKQ8TCT0 537 aa31.22■■■□□ 2.59
ABR-221ENST00000573559 PLEKHG1Q9ULL1 1385 aa31.19■■■□□ 2.58
ABR-221ENST00000573559 NEXMIFQ5QGS0 1516 aa31.16■■■□□ 2.58
ABR-221ENST00000573559 SLC26A8Q96RN1 970 aa31.16■■■□□ 2.58
ABR-221ENST00000573559 CPS1P31327 1500 aa31.14■■■□□ 2.57
ABR-221ENST00000573559 STRCP1A6NGW2 1772 aa31.12■■■□□ 2.57
ABR-221ENST00000573559 PPLO60437 1756 aa31.08■■■□□ 2.57
ABR-221ENST00000573559 ANKRD30BQ9BXX2 1392 aa31.06■■■□□ 2.56
ABR-221ENST00000573559 DIP2AQ14689 1571 aa31.06■■■□□ 2.56
ABR-221ENST00000573559 RGL3Q3MIN7 710 aa31.06■■■□□ 2.56
ABR-221ENST00000573559 SPATA31E1Q6ZUB1 1445 aa31.06■■■□□ 2.56
ABR-221ENST00000573559 IQSEC2Q5JU85 1478 aa31.05■■■□□ 2.56
ABR-221ENST00000573559 ADAMTS13Q76LX8 1427 aa31.05■■■□□ 2.56
ABR-221ENST00000573559 RPGRIP1LQ68CZ1 1315 aa31.04■■■□□ 2.56
ABR-221ENST00000573559 SETBP1Q9Y6X0 1596 aa31.04■■■□□ 2.56
ABR-221ENST00000573559 NRXN3Q9Y4C0 1643 aa31.03■■■□□ 2.56
ABR-221ENST00000573559 FBXO41Q8TF61 875 aa31.01■■■□□ 2.55
ABR-221ENST00000573559 TBX22Q9Y458 520 aa31■■■□□ 2.55
ABR-221ENST00000573559 IFT172Q9UG01 1749 aa31■■■□□ 2.55
ABR-221ENST00000573559 NWD1Q149M9 1564 aa31■■■□□ 2.55
ABR-221ENST00000573559 VGFO15240 615 aaPredicted RBP30.99■■■□□ 2.55
ABR-221ENST00000573559 CHD2O14647 1828 aaKnown RBP30.98■■■□□ 2.55
ABR-221ENST00000573559 LRRC7Q96NW7 1537 aa30.98■■■□□ 2.55
ABR-221ENST00000573559 KCNA6P17658 529 aa30.97■■■□□ 2.55
ABR-221ENST00000573559 ILDR1Q86SU0 546 aaPredicted RBP30.96■■■□□ 2.55
ABR-221ENST00000573559 NKTRP30414 1462 aaKnown RBP30.93■■■□□ 2.54
ABR-221ENST00000573559 PIK3R4Q99570 1358 aa30.91■■■□□ 2.54
ABR-221ENST00000573559 XIRP1Q702N8 1843 aaKnown RBP30.89■■■□□ 2.54
ABR-221ENST00000573559 ADGRF5Q8IZF2 1346 aa30.88■■■□□ 2.53
ABR-221ENST00000573559 ALKQ9UM73 1620 aa30.87■■■□□ 2.53
ABR-221ENST00000573559 SETD1AO15047 1707 aaKnown RBP30.87■■■□□ 2.53
ABR-221ENST00000573559 PROSER2Q86WR7 435 aaPredicted RBP30.87■■■□□ 2.53
ABR-221ENST00000573559 METP08581 1390 aa30.86■■■□□ 2.53
ABR-221ENST00000573559 PTPRUQ92729 1446 aa30.86■■■□□ 2.53
ABR-221ENST00000573559 TMEM94Q12767 1356 aa30.85■■■□□ 2.53
ABR-221ENST00000573559 UBAP1LF5GYI3 381 aa30.85■■■□□ 2.53
ABR-221ENST00000573559 DHX57Q6P158 1386 aaKnown RBP30.84■■■□□ 2.53
ABR-221ENST00000573559 MYOM2P54296 1465 aa30.83■■■□□ 2.53
ABR-221ENST00000573559 RBM33Q96EV2 1170 aaKnown RBP30.83■■■□□ 2.53
ABR-221ENST00000573559 XRN1Q8IZH2 1706 aaKnown RBP30.83■■■□□ 2.53
ABR-221ENST00000573559 AMOTL2Q9Y2J4 779 aa30.82■■■□□ 2.52
ABR-221ENST00000573559 PCGF6Q9BYE7 350 aa30.8■■■□□ 2.52
ABR-221ENST00000573559 PIK3C2GO75747 1445 aa30.8■■■□□ 2.52
ABR-221ENST00000573559 TOM1O60784 492 aa30.76■■■□□ 2.51
ABR-221ENST00000573559 DCAF11Q8TEB1 546 aa30.76■■■□□ 2.51
ABR-221ENST00000573559 NRXN1Q9ULB1 1477 aa30.76■■■□□ 2.51
ABR-221ENST00000573559 KDM2AQ9Y2K7 1162 aa30.75■■■□□ 2.51
ABR-221ENST00000573559 SCAF1Q9H7N4 1312 aaKnown RBP30.74■■■□□ 2.51
ABR-221ENST00000573559 LAMC1P11047 1609 aa30.73■■■□□ 2.51
ABR-221ENST00000573559 C14orf37Q86TY3 774 aa30.72■■■□□ 2.51
ABR-221ENST00000573559 MSH6P52701 1360 aa30.71■■■□□ 2.51
ABR-221ENST00000573559 PIP4K2BP78356 416 aa30.71■■■□□ 2.51
ABR-221ENST00000573559 SIN3AQ96ST3 1273 aa30.7■■■□□ 2.51
ABR-221ENST00000573559 ASXL1Q8IXJ9 1541 aa30.69■■■□□ 2.5
ABR-221ENST00000573559 NEUROD1Q13562 356 aa30.68■■■□□ 2.5
ABR-221ENST00000573559 NCOA3Q9Y6Q9 1424 aa30.66■■■□□ 2.5
ABR-221ENST00000573559 PTCH1Q13635 1447 aa30.65■■■□□ 2.5
ABR-221ENST00000573559 CFAP70Q5T0N1 1121 aa30.65■■■□□ 2.5
ABR-221ENST00000573559 TMEM132EQ6IEE7 984 aa30.65■■■□□ 2.5
ABR-221ENST00000573559 C14orf93Q9H972 538 aaKnown RBP30.65■■■□□ 2.5
ABR-221ENST00000573559 STAC3Q96MF2 364 aa30.64■■■□□ 2.5
ABR-221ENST00000573559 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.62■■■□□ 2.49
ABR-221ENST00000573559 STK26Q9P289 416 aa30.62■■■□□ 2.49
ABR-221ENST00000573559 ROBO2Q9HCK4 1378 aa30.62■■■□□ 2.49
ABR-221ENST00000573559 PRAG1Q86YV5 1406 aa30.61■■■□□ 2.49
ABR-221ENST00000573559 KNDC1Q76NI1 1749 aa30.61■■■□□ 2.49
ABR-221ENST00000573559 LRPPRCP42704 1394 aaKnown RBP30.6■■■□□ 2.49
ABR-221ENST00000573559 NALCNQ8IZF0 1738 aa30.59■■■□□ 2.49
ABR-221ENST00000573559 YTHDC2Q9H6S0 1430 aaKnown RBP30.59■■■□□ 2.49
ABR-221ENST00000573559 C19orf44Q9H6X5 657 aa30.57■■■□□ 2.48
ABR-221ENST00000573559 TECPR2O15040 1411 aa30.56■■■□□ 2.48
ABR-221ENST00000573559 ADGRL3Q9HAR2 1447 aa30.56■■■□□ 2.48
ABR-221ENST00000573559 L3MBTL2Q969R5 705 aa30.55■■■□□ 2.48
ABR-221ENST00000573559 ATF3P18847 181 aa30.54■■■□□ 2.48
ABR-221ENST00000573559 ABCC11Q96J66 1382 aa30.54■■■□□ 2.48
ABR-221ENST00000573559 ADGRB1O14514 1584 aa30.53■■■□□ 2.48
ABR-221ENST00000573559 CADPS2Q86UW7 1296 aa30.52■■■□□ 2.48
ABR-221ENST00000573559 DCCP43146 1447 aa30.52■■■□□ 2.48
ABR-221ENST00000573559 ROBO1Q9Y6N7 1651 aa30.5■■■□□ 2.47
ABR-221ENST00000573559 KIAA1210Q9ULL0 1709 aa30.49■■■□□ 2.47
ABR-221ENST00000573559 WAPLQ7Z5K2 1190 aa30.48■■■□□ 2.47
ABR-221ENST00000573559 SLAIN2Q9P270 581 aa30.48■■■□□ 2.47
ABR-221ENST00000573559 TONSLQ96HA7 1378 aa30.46■■■□□ 2.47
ABR-221ENST00000573559 PLEKHH1Q9ULM0 1364 aa30.46■■■□□ 2.47
ABR-221ENST00000573559 FAM135BQ49AJ0 1406 aa30.46■■■□□ 2.47
ABR-221ENST00000573559 HSPA1LP34931 641 aa30.45■■■□□ 2.47
ABR-221ENST00000573559 DLC1Q96QB1 1528 aa30.43■■■□□ 2.46
ABR-221ENST00000573559 TRAK1Q9UPV9 953 aa30.43■■■□□ 2.46
ABR-221ENST00000573559 MST1RQ04912 1400 aa30.4■■■□□ 2.46
ABR-221ENST00000573559 PRAM1Q96QH2 718 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms