RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
SMG6-211ENST00000572369 COL16A1Q07092 1604 aaPredicted RBP11.72□□□□□ -0.53
SMG6-211ENST00000572369 TNRQ92752 1358 aa11.72□□□□□ -0.53
SMG6-211ENST00000572369 EP400Q96L91 3159 aa11.71□□□□□ -0.53
SMG6-211ENST00000572369 THEMISQ8N1K5 641 aaPredicted RBP11.71□□□□□ -0.53
SMG6-211ENST00000572369 GCC2Q8IWJ2 1684 aa11.71□□□□□ -0.54
SMG6-211ENST00000572369 UNC13BO14795 1591 aa11.7□□□□□ -0.54
SMG6-211ENST00000572369 UGGT1Q9NYU2 1555 aa11.7□□□□□ -0.54
SMG6-211ENST00000572369 SENP3-EIF4A1A0A087X0R7 540 aa11.68□□□□□ -0.54
SMG6-211ENST00000572369 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
SMG6-211ENST00000572369 AFF2P51816 1311 aa11.67□□□□□ -0.54
SMG6-211ENST00000572369 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
SMG6-211ENST00000572369 ERVK-7P63135 1459 aa11.67□□□□□ -0.54
SMG6-211ENST00000572369 TET3O43151 1660 aa11.67□□□□□ -0.54
SMG6-211ENST00000572369 SHPRHQ149N8 1683 aa11.67□□□□□ -0.54
SMG6-211ENST00000572369 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
SMG6-211ENST00000572369 LMTK2Q8IWU2 1503 aa11.66□□□□□ -0.54
SMG6-211ENST00000572369 NLRP1Q9C000 1473 aa11.66□□□□□ -0.54
SMG6-211ENST00000572369 IQGAP3Q86VI3 1631 aa11.66□□□□□ -0.54
SMG6-211ENST00000572369 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
SMG6-211ENST00000572369 NUP155O75694 1391 aa11.66□□□□□ -0.54
SMG6-211ENST00000572369 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
SMG6-211ENST00000572369 NAIPQ13075 1403 aa11.65□□□□□ -0.54
SMG6-211ENST00000572369 TMEM94Q12767 1356 aa11.65□□□□□ -0.55
SMG6-211ENST00000572369 HFM1A2PYH4 1435 aa11.64□□□□□ -0.55
SMG6-211ENST00000572369 NWD1Q149M9 1564 aa11.63□□□□□ -0.55
SMG6-211ENST00000572369 E9PCH4 1651 aa11.63□□□□□ -0.55
SMG6-211ENST00000572369 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
SMG6-211ENST00000572369 RPRD2Q5VT52 1461 aaKnown RBP11.62□□□□□ -0.55
SMG6-211ENST00000572369 QTRT2Q9H974 415 aaKnown RBP11.61□□□□□ -0.55
SMG6-211ENST00000572369 PIK3C2BO00750 1634 aa11.6□□□□□ -0.55
SMG6-211ENST00000572369 UBR1Q8IWV7 1749 aa11.6□□□□□ -0.55
SMG6-211ENST00000572369 NGLY1Q96IV0 654 aa11.59□□□□□ -0.55
SMG6-211ENST00000572369 SPHKAPQ2M3C7 1700 aa11.58□□□□□ -0.56
SMG6-211ENST00000572369 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
SMG6-211ENST00000572369 SLC52A1Q9NWF4 448 aa11.58□□□□□ -0.56
SMG6-211ENST00000572369 SLAIN2Q9P270 581 aa11.58□□□□□ -0.56
SMG6-211ENST00000572369 NOS1P29475 1434 aa11.58□□□□□ -0.56
SMG6-211ENST00000572369 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
SMG6-211ENST00000572369 IDI1Q13907 227 aa11.57□□□□□ -0.56
SMG6-211ENST00000572369 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
SMG6-211ENST00000572369 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
SMG6-211ENST00000572369 AHDC1Q5TGY3 1603 aaPredicted RBP11.57□□□□□ -0.56
SMG6-211ENST00000572369 KDM5AP29375 1690 aaKnown RBP11.56□□□□□ -0.56
SMG6-211ENST00000572369 EID1Q9Y6B2 187 aa11.56□□□□□ -0.56
SMG6-211ENST00000572369 MYO5BQ9ULV0 1848 aa11.56□□□□□ -0.56
SMG6-211ENST00000572369 MSH6P52701 1360 aa11.55□□□□□ -0.56
SMG6-211ENST00000572369 HRCP23327 699 aa11.55□□□□□ -0.56
SMG6-211ENST00000572369 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
SMG6-211ENST00000572369 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
SMG6-211ENST00000572369 DIP2AQ14689 1571 aa11.54□□□□□ -0.56
SMG6-211ENST00000572369 BCL9LQ86UU0 1499 aa11.54□□□□□ -0.56
SMG6-211ENST00000572369 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
SMG6-211ENST00000572369 TXNDC2Q86VQ3 553 aa11.53□□□□□ -0.56
SMG6-211ENST00000572369 BCANQ96GW7 911 aa11.53□□□□□ -0.56
SMG6-211ENST00000572369 C8orf37Q96NL8 207 aa11.53□□□□□ -0.56
SMG6-211ENST00000572369 RAB3GAP2Q9H2M9 1393 aa11.53□□□□□ -0.56
SMG6-211ENST00000572369 KIF1BO60333 1816 aa11.52□□□□□ -0.57
SMG6-211ENST00000572369 PROSER2Q86WR7 435 aaPredicted RBP11.52□□□□□ -0.57
SMG6-211ENST00000572369 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.57
SMG6-211ENST00000572369 SLIT1O75093 1534 aa11.51□□□□□ -0.57
SMG6-211ENST00000572369 TMEM131LA2VDJ0 1609 aa11.51□□□□□ -0.57
SMG6-211ENST00000572369 PSDA5PKW4 1024 aaPredicted RBP11.51□□□□□ -0.57
SMG6-211ENST00000572369 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
SMG6-211ENST00000572369 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
SMG6-211ENST00000572369 TMEM2Q9UHN6 1383 aa11.51□□□□□ -0.57
SMG6-211ENST00000572369 C1QTNF8P60827 252 aa11.5□□□□□ -0.57
SMG6-211ENST00000572369 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
SMG6-211ENST00000572369 DEFB132Q7Z7B7 95 aa11.5□□□□□ -0.57
SMG6-211ENST00000572369 NKTRP30414 1462 aaKnown RBP11.5□□□□□ -0.57
SMG6-211ENST00000572369 ARHGAP23Q9P227 1491 aa11.5□□□□□ -0.57
SMG6-211ENST00000572369 TRPM2O94759 1503 aa11.5□□□□□ -0.57
SMG6-211ENST00000572369 KCNA6P17658 529 aa11.49□□□□□ -0.57
SMG6-211ENST00000572369 LTKP29376 864 aa11.49□□□□□ -0.57
SMG6-211ENST00000572369 MPHOSPH9Q99550 1183 aa11.49□□□□□ -0.57
SMG6-211ENST00000572369 CLTCL1P53675 1640 aa11.49□□□□□ -0.57
SMG6-211ENST00000572369 RIMS2Q9UQ26 1411 aa11.48□□□□□ -0.57
SMG6-211ENST00000572369 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMG6-211ENST00000572369 ZNF784Q8NCA9 323 aaPredicted RBP11.46□□□□□ -0.57
SMG6-211ENST00000572369 CCDC144AA2RUR9 1427 aa11.44□□□□□ -0.58
SMG6-211ENST00000572369 SLC26A8Q96RN1 970 aa11.43□□□□□ -0.58
SMG6-211ENST00000572369 TRPC5Q9UL62 973 aaPredicted RBP11.43□□□□□ -0.58
SMG6-211ENST00000572369 ZFYVE9O95405 1425 aa11.43□□□□□ -0.58
SMG6-211ENST00000572369 TRIM26Q12899 539 aaPredicted RBP11.42□□□□□ -0.58
SMG6-211ENST00000572369 SF3B2Q13435 895 aaKnown RBP11.42□□□□□ -0.58
SMG6-211ENST00000572369 ATRNO75882 1429 aa11.42□□□□□ -0.58
SMG6-211ENST00000572369 PLEKHG1Q9ULL1 1385 aa11.41□□□□□ -0.58
SMG6-211ENST00000572369 SLC34A2O95436 690 aa11.41□□□□□ -0.58
SMG6-211ENST00000572369 USP21Q9UK80 565 aa11.41□□□□□ -0.58
SMG6-211ENST00000572369 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
SMG6-211ENST00000572369 RGL3Q3MIN7 710 aa11.4□□□□□ -0.58
SMG6-211ENST00000572369 NEXMIFQ5QGS0 1516 aa11.39□□□□□ -0.59
SMG6-211ENST00000572369 PPLO60437 1756 aa11.39□□□□□ -0.59
SMG6-211ENST00000572369 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
SMG6-211ENST00000572369 RPGRIP1LQ68CZ1 1315 aa11.37□□□□□ -0.59
SMG6-211ENST00000572369 CHD2O14647 1828 aaKnown RBP11.37□□□□□ -0.59
SMG6-211ENST00000572369 ADAMTS2O95450 1211 aa11.37□□□□□ -0.59
SMG6-211ENST00000572369 PNPLA6Q8IY17 1366 aa11.37□□□□□ -0.59
SMG6-211ENST00000572369 BRINP3Q76B58 766 aa11.36□□□□□ -0.59
SMG6-211ENST00000572369 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms