RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-203ENST00000571351 RPGRIP1LQ68CZ1 1315 aa29.33■■■□□ 2.29
TNFRSF12A-203ENST00000571351 UHRF1BP1Q6BDS2 1440 aa29.32■■■□□ 2.28
TNFRSF12A-203ENST00000571351 MYOM2P54296 1465 aa29.31■■■□□ 2.28
TNFRSF12A-203ENST00000571351 ZFYVE9O95405 1425 aa29.3■■■□□ 2.28
TNFRSF12A-203ENST00000571351 PRAG1Q86YV5 1406 aa29.29■■■□□ 2.28
TNFRSF12A-203ENST00000571351 NRXN1Q9ULB1 1477 aa29.28■■■□□ 2.28
TNFRSF12A-203ENST00000571351 TMEM2Q9UHN6 1383 aa29.28■■■□□ 2.28
TNFRSF12A-203ENST00000571351 ADGRF5Q8IZF2 1346 aa29.28■■■□□ 2.28
TNFRSF12A-203ENST00000571351 RIMS2Q9UQ26 1411 aa29.27■■■□□ 2.28
TNFRSF12A-203ENST00000571351 NUTM2DQ5VT03 806 aaPredicted RBP29.27■■■□□ 2.28
TNFRSF12A-203ENST00000571351 STAC3Q96MF2 364 aa29.26■■■□□ 2.27
TNFRSF12A-203ENST00000571351 SLIT1O75093 1534 aa29.26■■■□□ 2.27
TNFRSF12A-203ENST00000571351 ARHGAP23Q9P227 1491 aa29.25■■■□□ 2.27
TNFRSF12A-203ENST00000571351 THEMISQ8N1K5 641 aaPredicted RBP29.23■■■□□ 2.27
TNFRSF12A-203ENST00000571351 PIK3C2GO75747 1445 aa29.2■■■□□ 2.27
TNFRSF12A-203ENST00000571351 VGFO15240 615 aaPredicted RBP29.2■■■□□ 2.26
TNFRSF12A-203ENST00000571351 TRPM1Q7Z4N2 1603 aa29.2■■■□□ 2.26
TNFRSF12A-203ENST00000571351 LTKP29376 864 aa29.18■■■□□ 2.26
TNFRSF12A-203ENST00000571351 RALGAPBQ86X10 1494 aa29.16■■■□□ 2.26
TNFRSF12A-203ENST00000571351 LMTK3Q96Q04 1460 aa29.15■■■□□ 2.26
TNFRSF12A-203ENST00000571351 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.15■■■□□ 2.26
TNFRSF12A-203ENST00000571351 KIAA1210Q9ULL0 1709 aa29.13■■■□□ 2.25
TNFRSF12A-203ENST00000571351 NRXN3Q9Y4C0 1643 aa29.12■■■□□ 2.25
TNFRSF12A-203ENST00000571351 TXNDC2Q86VQ3 553 aa29.12■■■□□ 2.25
TNFRSF12A-203ENST00000571351 NBPF1Q3BBV0 1214 aa29.11■■■□□ 2.25
TNFRSF12A-203ENST00000571351 SCAF11Q99590 1463 aaKnown RBP29.1■■■□□ 2.25
TNFRSF12A-203ENST00000571351 HDGFP51858 240 aaKnown RBP29.1■■■□□ 2.25
TNFRSF12A-203ENST00000571351 CFAP70Q5T0N1 1121 aa29.1■■■□□ 2.25
TNFRSF12A-203ENST00000571351 SENP3Q9H4L4 574 aaPredicted RBP29.1■■■□□ 2.25
TNFRSF12A-203ENST00000571351 ZNF316A6NFI3 1004 aaPredicted RBP29.09■■■□□ 2.25
TNFRSF12A-203ENST00000571351 IQGAP1P46940 1657 aa29.08■■■□□ 2.25
TNFRSF12A-203ENST00000571351 SETBP1Q9Y6X0 1596 aa29.08■■■□□ 2.25
TNFRSF12A-203ENST00000571351 C14orf93Q9H972 538 aaKnown RBP29.08■■■□□ 2.25
TNFRSF12A-203ENST00000571351 EID1Q9Y6B2 187 aa29.08■■■□□ 2.25
TNFRSF12A-203ENST00000571351 PLEKHG1Q9ULL1 1385 aa29.07■■■□□ 2.24
TNFRSF12A-203ENST00000571351 SETD1AO15047 1707 aaKnown RBP29.07■■■□□ 2.24
TNFRSF12A-203ENST00000571351 GPRASP1Q5JY77 1395 aa29.06■■■□□ 2.24
TNFRSF12A-203ENST00000571351 LAMC1P11047 1609 aa29.06■■■□□ 2.24
TNFRSF12A-203ENST00000571351 ALKQ9UM73 1620 aa29.05■■■□□ 2.24
TNFRSF12A-203ENST00000571351 ROCK2O75116 1388 aaKnown RBP29.05■■■□□ 2.24
TNFRSF12A-203ENST00000571351 HSPA2P54652 639 aa29.04■■■□□ 2.24
TNFRSF12A-203ENST00000571351 POLR1AO95602 1720 aaPredicted RBP29.04■■■□□ 2.24
TNFRSF12A-203ENST00000571351 ADGRB1O14514 1584 aa29.04■■■□□ 2.24
TNFRSF12A-203ENST00000571351 ASXL1Q8IXJ9 1541 aa29.03■■■□□ 2.24
TNFRSF12A-203ENST00000571351 ANKLE2Q86XL3 938 aa29.02■■■□□ 2.24
TNFRSF12A-203ENST00000571351 ADAMTS13Q76LX8 1427 aa29.02■■■□□ 2.24
TNFRSF12A-203ENST00000571351 MED14O60244 1454 aa29■■■□□ 2.23
TNFRSF12A-203ENST00000571351 CARD11Q9BXL7 1154 aa28.98■■■□□ 2.23
TNFRSF12A-203ENST00000571351 NCKAP5LQ9HCH0 1330 aa28.97■■■□□ 2.23
TNFRSF12A-203ENST00000571351 TMEM132EQ6IEE7 984 aa28.96■■■□□ 2.23
TNFRSF12A-203ENST00000571351 STRCQ7RTU9 1775 aa28.94■■■□□ 2.22
TNFRSF12A-203ENST00000571351 METP08581 1390 aa28.93■■■□□ 2.22
TNFRSF12A-203ENST00000571351 BCANQ96GW7 911 aa28.93■■■□□ 2.22
TNFRSF12A-203ENST00000571351 SLC26A8Q96RN1 970 aa28.93■■■□□ 2.22
TNFRSF12A-203ENST00000571351 NPHP4O75161 1426 aaPredicted RBP28.93■■■□□ 2.22
TNFRSF12A-203ENST00000571351 USP47Q96K76 1375 aa28.9■■■□□ 2.22
TNFRSF12A-203ENST00000571351 DIP2AQ14689 1571 aa28.9■■■□□ 2.22
TNFRSF12A-203ENST00000571351 TBX22Q9Y458 520 aa28.89■■■□□ 2.21
TNFRSF12A-203ENST00000571351 HSPA5P11021 654 aaKnown RBP28.87■■■□□ 2.21
TNFRSF12A-203ENST00000571351 EIF4G2P78344 907 aaKnown RBP eCLIP28.86■■■□□ 2.21
TNFRSF12A-203ENST00000571351 YTHDC2Q9H6S0 1430 aaKnown RBP28.86■■■□□ 2.21
TNFRSF12A-203ENST00000571351 HIRIP3Q9BW71 556 aaPredicted RBP28.86■■■□□ 2.21
TNFRSF12A-203ENST00000571351 PTPRUQ92729 1446 aa28.83■■■□□ 2.21
TNFRSF12A-203ENST00000571351 ARHGEF28Q8N1W1 1705 aaKnown RBP28.83■■■□□ 2.21
TNFRSF12A-203ENST00000571351 LRPPRCP42704 1394 aaKnown RBP28.82■■■□□ 2.2
TNFRSF12A-203ENST00000571351 TRAK1Q9UPV9 953 aa28.81■■■□□ 2.2
TNFRSF12A-203ENST00000571351 ST20-MTHFSA0A0A6YYL1 179 aa28.8■■■□□ 2.2
TNFRSF12A-203ENST00000571351 STK26Q9P289 416 aa28.8■■■□□ 2.2
TNFRSF12A-203ENST00000571351 KNDC1Q76NI1 1749 aa28.79■■■□□ 2.2
TNFRSF12A-203ENST00000571351 ABCC11Q96J66 1382 aa28.78■■■□□ 2.2
TNFRSF12A-203ENST00000571351 CHD2O14647 1828 aaKnown RBP28.78■■■□□ 2.2
TNFRSF12A-203ENST00000571351 TECPR2O15040 1411 aa28.77■■■□□ 2.2
TNFRSF12A-203ENST00000571351 PIK3R4Q99570 1358 aa28.76■■■□□ 2.19
TNFRSF12A-203ENST00000571351 XRN1Q8IZH2 1706 aaKnown RBP28.76■■■□□ 2.19
TNFRSF12A-203ENST00000571351 DLC1Q96QB1 1528 aa28.76■■■□□ 2.19
TNFRSF12A-203ENST00000571351 EIF3AQ14152 1382 aaKnown RBP28.73■■■□□ 2.19
TNFRSF12A-203ENST00000571351 CPS1P31327 1500 aa28.73■■■□□ 2.19
TNFRSF12A-203ENST00000571351 TESK2Q96S53 571 aa28.73■■■□□ 2.19
TNFRSF12A-203ENST00000571351 AMOTL2Q9Y2J4 779 aa28.72■■■□□ 2.19
TNFRSF12A-203ENST00000571351 ROBO2Q9HCK4 1378 aa28.7■■■□□ 2.18
TNFRSF12A-203ENST00000571351 QRICH2Q9H0J4 1663 aa28.7■■■□□ 2.18
TNFRSF12A-203ENST00000571351 PLEKHH1Q9ULM0 1364 aa28.69■■■□□ 2.18
TNFRSF12A-203ENST00000571351 CENPJQ9HC77 1338 aaPredicted RBP28.68■■■□□ 2.18
TNFRSF12A-203ENST00000571351 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
TNFRSF12A-203ENST00000571351 PRAM1Q96QH2 718 aa28.67■■■□□ 2.18
TNFRSF12A-203ENST00000571351 NWD1Q149M9 1564 aa28.67■■■□□ 2.18
TNFRSF12A-203ENST00000571351 C11orf95C9JLR9 678 aaPredicted RBP28.67■■■□□ 2.18
TNFRSF12A-203ENST00000571351 KCNA6P17658 529 aa28.67■■■□□ 2.18
TNFRSF12A-203ENST00000571351 FAM135BQ49AJ0 1406 aa28.67■■■□□ 2.18
TNFRSF12A-203ENST00000571351 STRCP1A6NGW2 1772 aa28.66■■■□□ 2.18
TNFRSF12A-203ENST00000571351 PTCH1Q13635 1447 aa28.66■■■□□ 2.18
TNFRSF12A-203ENST00000571351 DIEXFQ68CQ4 756 aaKnown RBP28.66■■■□□ 2.18
TNFRSF12A-203ENST00000571351 WAPLQ7Z5K2 1190 aa28.66■■■□□ 2.18
TNFRSF12A-203ENST00000571351 SIRT1Q96EB6 747 aa28.66■■■□□ 2.18
TNFRSF12A-203ENST00000571351 SBNO2Q9Y2G9 1366 aa28.64■■■□□ 2.18
TNFRSF12A-203ENST00000571351 SAFB2Q14151 953 aaKnown RBP eCLIP28.62■■■□□ 2.17
TNFRSF12A-203ENST00000571351 POGKQ9P215 609 aa28.61■■■□□ 2.17
TNFRSF12A-203ENST00000571351 DISP3Q9P2K9 1392 aa28.6■■■□□ 2.17
TNFRSF12A-203ENST00000571351 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.59■■■□□ 2.17
TNFRSF12A-203ENST00000571351 DMRT2Q9Y5R5 561 aa28.58■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms