RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 RPRD2Q5VT52 1461 aaKnown RBP18.89■□□□□ 0.61
CTDNEP1-205ENST00000570828 ARHGAP23Q9P227 1491 aa18.89■□□□□ 0.61
CTDNEP1-205ENST00000570828 SLIT1O75093 1534 aa18.89■□□□□ 0.61
CTDNEP1-205ENST00000570828 EID1Q9Y6B2 187 aa18.88■□□□□ 0.61
CTDNEP1-205ENST00000570828 PIK3C2BO00750 1634 aa18.88■□□□□ 0.61
CTDNEP1-205ENST00000570828 CFAP65Q6ZU64 1925 aaKnown RBP18.88■□□□□ 0.61
CTDNEP1-205ENST00000570828 SYNMO15061 1565 aa18.87■□□□□ 0.61
CTDNEP1-205ENST00000570828 TXNDC2Q86VQ3 553 aa18.87■□□□□ 0.61
CTDNEP1-205ENST00000570828 UNC13BO14795 1591 aa18.86■□□□□ 0.61
CTDNEP1-205ENST00000570828 TMEM2Q9UHN6 1383 aa18.86■□□□□ 0.61
CTDNEP1-205ENST00000570828 IDI1Q13907 227 aa18.86■□□□□ 0.61
CTDNEP1-205ENST00000570828 LTKP29376 864 aa18.84■□□□□ 0.61
CTDNEP1-205ENST00000570828 SLC52A1Q9NWF4 448 aa18.84■□□□□ 0.61
CTDNEP1-205ENST00000570828 TET3O43151 1660 aa18.84■□□□□ 0.61
CTDNEP1-205ENST00000570828 ADGRB3O60242 1522 aa18.83■□□□□ 0.6
CTDNEP1-205ENST00000570828 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
CTDNEP1-205ENST00000570828 AKT1S1Q96B36 256 aa18.82■□□□□ 0.6
CTDNEP1-205ENST00000570828 RRBP1Q9P2E9 1410 aaKnown RBP18.82■□□□□ 0.6
CTDNEP1-205ENST00000570828 NUP155O75694 1391 aa18.8■□□□□ 0.6
CTDNEP1-205ENST00000570828 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
CTDNEP1-205ENST00000570828 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
CTDNEP1-205ENST00000570828 TOM1O60784 492 aa18.78■□□□□ 0.6
CTDNEP1-205ENST00000570828 ZBTB12Q9Y330 459 aaPredicted RBP18.78■□□□□ 0.6
CTDNEP1-205ENST00000570828 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
CTDNEP1-205ENST00000570828 PIP4K2BP78356 416 aa18.75■□□□□ 0.59
CTDNEP1-205ENST00000570828 E9PCH4 1651 aa18.73■□□□□ 0.59
CTDNEP1-205ENST00000570828 PPP1R15AO75807 674 aaPredicted RBP18.72■□□□□ 0.59
CTDNEP1-205ENST00000570828 CHGAP10645 457 aaKnown RBP18.72■□□□□ 0.59
CTDNEP1-205ENST00000570828 STRCP1A6NGW2 1772 aa18.72■□□□□ 0.59
CTDNEP1-205ENST00000570828 BCANQ96GW7 911 aa18.71■□□□□ 0.59
CTDNEP1-205ENST00000570828 ZFYVE9O95405 1425 aa18.71■□□□□ 0.59
CTDNEP1-205ENST00000570828 RIMS2Q9UQ26 1411 aa18.71■□□□□ 0.59
CTDNEP1-205ENST00000570828 DISP3Q9P2K9 1392 aa18.7■□□□□ 0.58
CTDNEP1-205ENST00000570828 HDGFP51858 240 aaKnown RBP18.7■□□□□ 0.58
CTDNEP1-205ENST00000570828 SP7Q8TDD2 431 aaPredicted RBP18.7■□□□□ 0.58
CTDNEP1-205ENST00000570828 SLC26A8Q96RN1 970 aa18.7■□□□□ 0.58
CTDNEP1-205ENST00000570828 NAIPQ13075 1403 aa18.69■□□□□ 0.58
CTDNEP1-205ENST00000570828 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
CTDNEP1-205ENST00000570828 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
CTDNEP1-205ENST00000570828 PLEKHG1Q9ULL1 1385 aa18.68■□□□□ 0.58
CTDNEP1-205ENST00000570828 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.67■□□□□ 0.58
CTDNEP1-205ENST00000570828 KCNA6P17658 529 aa18.66■□□□□ 0.58
CTDNEP1-205ENST00000570828 HSPA1LP34931 641 aa18.66■□□□□ 0.58
CTDNEP1-205ENST00000570828 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
CTDNEP1-205ENST00000570828 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
CTDNEP1-205ENST00000570828 ALKQ9UM73 1620 aa18.65■□□□□ 0.58
CTDNEP1-205ENST00000570828 TMEM94Q12767 1356 aa18.64■□□□□ 0.57
CTDNEP1-205ENST00000570828 NKTRP30414 1462 aaKnown RBP18.64■□□□□ 0.57
CTDNEP1-205ENST00000570828 REM2Q8IYK8 340 aaPredicted RBP18.62■□□□□ 0.57
CTDNEP1-205ENST00000570828 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
CTDNEP1-205ENST00000570828 MYO5BQ9ULV0 1848 aa18.61■□□□□ 0.57
CTDNEP1-205ENST00000570828 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
CTDNEP1-205ENST00000570828 PROSER2Q86WR7 435 aaPredicted RBP18.6■□□□□ 0.57
CTDNEP1-205ENST00000570828 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
CTDNEP1-205ENST00000570828 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
CTDNEP1-205ENST00000570828 SPHKAPQ2M3C7 1700 aa18.6■□□□□ 0.57
CTDNEP1-205ENST00000570828 TBX22Q9Y458 520 aa18.58■□□□□ 0.56
CTDNEP1-205ENST00000570828 TRPM2O94759 1503 aa18.58■□□□□ 0.56
CTDNEP1-205ENST00000570828 DIP2AQ14689 1571 aa18.57■□□□□ 0.56
CTDNEP1-205ENST00000570828 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
CTDNEP1-205ENST00000570828 PIP4P2Q8N4L2 257 aa18.56■□□□□ 0.56
CTDNEP1-205ENST00000570828 RBM33Q96EV2 1170 aaKnown RBP18.56■□□□□ 0.56
CTDNEP1-205ENST00000570828 ADAMTS13Q76LX8 1427 aa18.56■□□□□ 0.56
CTDNEP1-205ENST00000570828 XIRP1Q702N8 1843 aaKnown RBP18.55■□□□□ 0.56
CTDNEP1-205ENST00000570828 MSH6P52701 1360 aa18.54■□□□□ 0.56
CTDNEP1-205ENST00000570828 PIK3R4Q99570 1358 aa18.54■□□□□ 0.56
CTDNEP1-205ENST00000570828 CLTCL1P53675 1640 aa18.53■□□□□ 0.56
CTDNEP1-205ENST00000570828 FAM135BQ49AJ0 1406 aa18.5■□□□□ 0.55
CTDNEP1-205ENST00000570828 ILDR2Q71H61 639 aa18.5■□□□□ 0.55
CTDNEP1-205ENST00000570828 MED1Q15648 1581 aaPredicted RBP18.5■□□□□ 0.55
CTDNEP1-205ENST00000570828 C14orf37Q86TY3 774 aa18.49■□□□□ 0.55
CTDNEP1-205ENST00000570828 SETBP1Q9Y6X0 1596 aa18.49■□□□□ 0.55
CTDNEP1-205ENST00000570828 CHD2O14647 1828 aaKnown RBP18.49■□□□□ 0.55
CTDNEP1-205ENST00000570828 NCOA3Q9Y6Q9 1424 aa18.48■□□□□ 0.55
CTDNEP1-205ENST00000570828 NEXMIFQ5QGS0 1516 aa18.47■□□□□ 0.55
CTDNEP1-205ENST00000570828 AMOTL2Q9Y2J4 779 aa18.46■□□□□ 0.55
CTDNEP1-205ENST00000570828 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
CTDNEP1-205ENST00000570828 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
CTDNEP1-205ENST00000570828 SLAIN2Q9P270 581 aa18.44■□□□□ 0.54
CTDNEP1-205ENST00000570828 ROBO1Q9Y6N7 1651 aa18.43■□□□□ 0.54
CTDNEP1-205ENST00000570828 KIF1BO60333 1816 aa18.42■□□□□ 0.54
CTDNEP1-205ENST00000570828 METP08581 1390 aa18.42■□□□□ 0.54
CTDNEP1-205ENST00000570828 PITPNM1O00562 1244 aa18.41■□□□□ 0.54
CTDNEP1-205ENST00000570828 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
CTDNEP1-205ENST00000570828 ATF3P18847 181 aa18.41■□□□□ 0.54
CTDNEP1-205ENST00000570828 CADPS2Q86UW7 1296 aa18.41■□□□□ 0.54
CTDNEP1-205ENST00000570828 C19orf44Q9H6X5 657 aa18.41■□□□□ 0.54
CTDNEP1-205ENST00000570828 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
CTDNEP1-205ENST00000570828 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
CTDNEP1-205ENST00000570828 HAX1O00165 279 aa18.4■□□□□ 0.54
CTDNEP1-205ENST00000570828 MPHOSPH9Q99550 1183 aa18.4■□□□□ 0.54
CTDNEP1-205ENST00000570828 RPGRIP1LQ68CZ1 1315 aa18.4■□□□□ 0.54
CTDNEP1-205ENST00000570828 XRN1Q8IZH2 1706 aaKnown RBP18.4■□□□□ 0.54
CTDNEP1-205ENST00000570828 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
CTDNEP1-205ENST00000570828 SOCS7O14512 581 aa18.38■□□□□ 0.53
CTDNEP1-205ENST00000570828 FXR2P51116 673 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTDNEP1-205ENST00000570828 DCCP43146 1447 aa18.37■□□□□ 0.53
CTDNEP1-205ENST00000570828 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
CTDNEP1-205ENST00000570828 PTCH1Q13635 1447 aa18.32■□□□□ 0.52
CTDNEP1-205ENST00000570828 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms