RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 SUDS3Q9H7L9 328 aaPredicted RBP11.18□□□□□ -0.62
TRIM25-203ENST00000570473 DONSONQ9NYP3 566 aa11.18□□□□□ -0.62
TRIM25-203ENST00000570473 KRBA2Q6ZNG9 492 aa11.17□□□□□ -0.62
TRIM25-203ENST00000570473 CACTIN-AS1Q8N1I8 211 aa11.17□□□□□ -0.62
TRIM25-203ENST00000570473 DCAF11Q8TEB1 546 aa11.17□□□□□ -0.62
TRIM25-203ENST00000570473 TULP2O00295 520 aa11.16□□□□□ -0.62
TRIM25-203ENST00000570473 TRHP20396 242 aaPredicted RBP11.16□□□□□ -0.62
TRIM25-203ENST00000570473 POLD1P28340 1107 aa11.16□□□□□ -0.62
TRIM25-203ENST00000570473 TRDNQ13061 729 aa11.16□□□□□ -0.62
TRIM25-203ENST00000570473 LSM14AQ8ND56 463 aaKnown RBP11.16□□□□□ -0.62
TRIM25-203ENST00000570473 TRAIPQ9BWF2 469 aa11.16□□□□□ -0.62
TRIM25-203ENST00000570473 GOLGA6CA6NDK9 693 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 GOLGA6BA6NDN3 693 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 CCER2I3L3R5 266 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 ZBTB22O15209 634 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 GOLGA6DP0CG33 693 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 SCP2P22307 547 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 ITGAEP38570 1179 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 MCCD1P59942 119 aaPredicted RBP11.15□□□□□ -0.62
TRIM25-203ENST00000570473 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
TRIM25-203ENST00000570473 TIGD1Q96MW7 591 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 MED4Q9NPJ6 270 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 GOLGA6AQ9NYA3 693 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 ABCF2Q9UG63 623 aa11.15□□□□□ -0.62
TRIM25-203ENST00000570473 KLHL33A6NCF5 533 aa11.14□□□□□ -0.63
TRIM25-203ENST00000570473 COQ9O75208 318 aa11.14□□□□□ -0.63
TRIM25-203ENST00000570473 HSP90B2PQ58FF3 399 aa11.14□□□□□ -0.63
TRIM25-203ENST00000570473 SYNPO2Q9UMS6 1093 aa11.14□□□□□ -0.63
TRIM25-203ENST00000570473 FRMD4BQ9Y2L6 1034 aa11.14□□□□□ -0.63
TRIM25-203ENST00000570473 EXOC5O00471 708 aa11.13□□□□□ -0.63
TRIM25-203ENST00000570473 PPP1R12AO14974 1030 aaPredicted RBP11.13□□□□□ -0.63
TRIM25-203ENST00000570473 IPO7O95373 1038 aaKnown RBP11.13□□□□□ -0.63
TRIM25-203ENST00000570473 BRD1O95696 1058 aa11.13□□□□□ -0.63
TRIM25-203ENST00000570473 PEX19P40855 299 aa11.13□□□□□ -0.63
TRIM25-203ENST00000570473 NFKBIBQ15653 356 aa11.13□□□□□ -0.63
TRIM25-203ENST00000570473 LONRF3Q496Y0 759 aa11.13□□□□□ -0.63
TRIM25-203ENST00000570473 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
TRIM25-203ENST00000570473 ZNF280DQ6N043 979 aa11.13□□□□□ -0.63
TRIM25-203ENST00000570473 RPAINQ86UA6 219 aa11.13□□□□□ -0.63
TRIM25-203ENST00000570473 CALCOCO1Q9P1Z2 691 aa11.13□□□□□ -0.63
TRIM25-203ENST00000570473 MAGEC2Q9UBF1 373 aaPredicted RBP11.13□□□□□ -0.63
TRIM25-203ENST00000570473 ZBED9Q6R2W3 1325 aa11.12□□□□□ -0.63
TRIM25-203ENST00000570473 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
TRIM25-203ENST00000570473 OFD1O75665 1012 aa11.12□□□□□ -0.63
TRIM25-203ENST00000570473 CD151P48509 253 aa11.12□□□□□ -0.63
TRIM25-203ENST00000570473 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
TRIM25-203ENST00000570473 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
TRIM25-203ENST00000570473 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
TRIM25-203ENST00000570473 RAD54L2Q9Y4B4 1467 aa11.12□□□□□ -0.63
TRIM25-203ENST00000570473 SCRIBQ14160 1630 aa11.11□□□□□ -0.63
TRIM25-203ENST00000570473 MPHOSPH10O00566 681 aaKnown RBP11.11□□□□□ -0.63
TRIM25-203ENST00000570473 HDGFL1Q5TGJ6 251 aa11.11□□□□□ -0.63
TRIM25-203ENST00000570473 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
TRIM25-203ENST00000570473 JADE2Q9NQC1 790 aa11.11□□□□□ -0.63
TRIM25-203ENST00000570473 SMC3Q9UQE7 1217 aa11.11□□□□□ -0.63
TRIM25-203ENST00000570473 ZBTB12Q9Y330 459 aaPredicted RBP11.11□□□□□ -0.63
TRIM25-203ENST00000570473 PAXBP1Q9Y5B6 917 aa11.11□□□□□ -0.63
TRIM25-203ENST00000570473 PHLDB1Q86UU1 1377 aa11.11□□□□□ -0.63
TRIM25-203ENST00000570473 SYNRGQ9UMZ2 1314 aa11.1□□□□□ -0.63
TRIM25-203ENST00000570473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
TRIM25-203ENST00000570473 TDO2P48775 406 aa11.1□□□□□ -0.63
TRIM25-203ENST00000570473 APBB1IPQ7Z5R6 666 aaPredicted RBP11.1□□□□□ -0.63
TRIM25-203ENST00000570473 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
TRIM25-203ENST00000570473 CGNQ9P2M7 1197 aaKnown RBP11.1□□□□□ -0.63
TRIM25-203ENST00000570473 IPO8O15397 1037 aaKnown RBP11.09□□□□□ -0.63
TRIM25-203ENST00000570473 DHX16O60231 1041 aaKnown RBP11.09□□□□□ -0.63
TRIM25-203ENST00000570473 SSFA2P28290 1259 aa11.09□□□□□ -0.63
TRIM25-203ENST00000570473 GABPB1Q06547 395 aaPredicted RBP11.09□□□□□ -0.63
TRIM25-203ENST00000570473 MPNDQ8N594 471 aa11.09□□□□□ -0.63
TRIM25-203ENST00000570473 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
TRIM25-203ENST00000570473 CCDC97Q96F63 343 aaPredicted RBP11.09□□□□□ -0.63
TRIM25-203ENST00000570473 CT47A1Q5JQC4 288 aaPredicted RBP11.08□□□□□ -0.64
TRIM25-203ENST00000570473 SLC26A8Q96RN1 970 aa11.08□□□□□ -0.64
TRIM25-203ENST00000570473 NUCKS1Q9H1E3 243 aaKnown RBP11.08□□□□□ -0.64
TRIM25-203ENST00000570473 PPME1Q9Y570 386 aa11.08□□□□□ -0.64
TRIM25-203ENST00000570473 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
TRIM25-203ENST00000570473 SETSIPP0DME0 302 aa11.07□□□□□ -0.64
TRIM25-203ENST00000570473 RIPK4P57078 832 aa11.07□□□□□ -0.64
TRIM25-203ENST00000570473 GJC2Q5T442 439 aaPredicted RBP11.07□□□□□ -0.64
TRIM25-203ENST00000570473 CCDC181Q5TID7 509 aa11.07□□□□□ -0.64
TRIM25-203ENST00000570473 ZCRB1Q8TBF4 217 aaKnown RBP11.07□□□□□ -0.64
TRIM25-203ENST00000570473 ERCC4Q92889 916 aaPredicted RBP11.07□□□□□ -0.64
TRIM25-203ENST00000570473 FAM13BQ9NYF5 915 aa11.07□□□□□ -0.64
TRIM25-203ENST00000570473 CCDC196A0A1B0GTZ2 297 aa11.06□□□□□ -0.64
TRIM25-203ENST00000570473 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
TRIM25-203ENST00000570473 C11orf91Q3C1V1 193 aa11.06□□□□□ -0.64
TRIM25-203ENST00000570473 ZC3H12AQ5D1E8 599 aaKnown RBP11.06□□□□□ -0.64
TRIM25-203ENST00000570473 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
TRIM25-203ENST00000570473 CCDC85AQ96PX6 553 aaPredicted RBP11.06□□□□□ -0.64
TRIM25-203ENST00000570473 MARCH6O60337 910 aa11.05□□□□□ -0.64
TRIM25-203ENST00000570473 KCNJ4P48050 445 aa11.05□□□□□ -0.64
TRIM25-203ENST00000570473 EIF3JO75822 258 aaKnown RBP11.04□□□□□ -0.64
TRIM25-203ENST00000570473 SPATA32Q96LK8 384 aa11.04□□□□□ -0.64
TRIM25-203ENST00000570473 RANBP17Q9H2T7 1088 aaKnown RBP11.04□□□□□ -0.64
TRIM25-203ENST00000570473 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
TRIM25-203ENST00000570473 TPM3P06753 285 aa11.03□□□□□ -0.64
TRIM25-203ENST00000570473 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
TRIM25-203ENST00000570473 TNNT3P45378 269 aaPredicted RBP11.03□□□□□ -0.64
TRIM25-203ENST00000570473 PSMC1P62191 440 aaKnown RBP11.03□□□□□ -0.64
TRIM25-203ENST00000570473 SARNPP82979 210 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms