RNA–Protein interactions for RNA: ENST00000570215.1

KARS-212, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-212ENST00000570215 NUTM2DQ5VT03 806 aaPredicted RBP22.2■■□□□ 1.14
KARS-212ENST00000570215 ZFYVE9O95405 1425 aa22.19■■□□□ 1.14
KARS-212ENST00000570215 LRRC7Q96NW7 1537 aa22.18■■□□□ 1.14
KARS-212ENST00000570215 RIMS2Q9UQ26 1411 aa22.17■■□□□ 1.14
KARS-212ENST00000570215 TRIM52Q96A61 297 aa22.17■■□□□ 1.14
KARS-212ENST00000570215 SPHKAPQ2M3C7 1700 aa22.15■■□□□ 1.14
KARS-212ENST00000570215 BCANQ96GW7 911 aa22.14■■□□□ 1.13
KARS-212ENST00000570215 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
KARS-212ENST00000570215 PIP4K2BP78356 416 aa22.13■■□□□ 1.13
KARS-212ENST00000570215 RBM33Q96EV2 1170 aaKnown RBP22.12■■□□□ 1.13
KARS-212ENST00000570215 PPP1R15AO75807 674 aaPredicted RBP22.11■■□□□ 1.13
KARS-212ENST00000570215 XIRP1Q702N8 1843 aaKnown RBP22.1■■□□□ 1.13
KARS-212ENST00000570215 SCAF1Q9H7N4 1312 aaKnown RBP22.1■■□□□ 1.13
KARS-212ENST00000570215 PLEKHG1Q9ULL1 1385 aa22.1■■□□□ 1.13
KARS-212ENST00000570215 CLTCL1P53675 1640 aa22.09■■□□□ 1.13
KARS-212ENST00000570215 SLC4A1APQ9BWU0 796 aaKnown RBP22.08■■□□□ 1.13
KARS-212ENST00000570215 TOM1O60784 492 aa22.07■■□□□ 1.12
KARS-212ENST00000570215 KCNA6P17658 529 aa22.07■■□□□ 1.12
KARS-212ENST00000570215 TRPM2O94759 1503 aa22.05■■□□□ 1.12
KARS-212ENST00000570215 HDGFP51858 240 aaKnown RBP22.04■■□□□ 1.12
KARS-212ENST00000570215 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.04■■□□□ 1.12
KARS-212ENST00000570215 ADAMTS13Q76LX8 1427 aa22.04■■□□□ 1.12
KARS-212ENST00000570215 ZNF326Q5BKZ1 582 aaKnown RBP22.03■■□□□ 1.12
KARS-212ENST00000570215 TMEM94Q12767 1356 aa22.02■■□□□ 1.12
KARS-212ENST00000570215 HSPA1LP34931 641 aa22.02■■□□□ 1.12
KARS-212ENST00000570215 PROSER2Q86WR7 435 aaPredicted RBP22.02■■□□□ 1.12
KARS-212ENST00000570215 NWD1Q149M9 1564 aa22.01■■□□□ 1.11
KARS-212ENST00000570215 TBX22Q9Y458 520 aa22.01■■□□□ 1.11
KARS-212ENST00000570215 CHD2O14647 1828 aaKnown RBP21.99■■□□□ 1.11
KARS-212ENST00000570215 MPHOSPH9Q99550 1183 aa21.98■■□□□ 1.11
KARS-212ENST00000570215 NRXN3Q9Y4C0 1643 aa21.97■■□□□ 1.11
KARS-212ENST00000570215 KIF1BO60333 1816 aa21.96■■□□□ 1.11
KARS-212ENST00000570215 NEXMIFQ5QGS0 1516 aa21.96■■□□□ 1.11
KARS-212ENST00000570215 PTPRUQ92729 1446 aa21.96■■□□□ 1.11
KARS-212ENST00000570215 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
KARS-212ENST00000570215 NKTRP30414 1462 aaKnown RBP21.94■■□□□ 1.1
KARS-212ENST00000570215 RAB3GAP2Q9H2M9 1393 aa21.92■■□□□ 1.1
KARS-212ENST00000570215 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
KARS-212ENST00000570215 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
KARS-212ENST00000570215 METP08581 1390 aa21.9■■□□□ 1.1
KARS-212ENST00000570215 DISP3Q9P2K9 1392 aa21.9■■□□□ 1.1
KARS-212ENST00000570215 AMOTL2Q9Y2J4 779 aa21.9■■□□□ 1.1
KARS-212ENST00000570215 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
KARS-212ENST00000570215 RGL3Q3MIN7 710 aa21.85■■□□□ 1.09
KARS-212ENST00000570215 MSH6P52701 1360 aa21.85■■□□□ 1.09
KARS-212ENST00000570215 CCDC144AA2RUR9 1427 aa21.83■■□□□ 1.09
KARS-212ENST00000570215 PPLO60437 1756 aa21.83■■□□□ 1.09
KARS-212ENST00000570215 ILDR2Q71H61 639 aa21.82■■□□□ 1.08
KARS-212ENST00000570215 C14orf37Q86TY3 774 aa21.82■■□□□ 1.08
KARS-212ENST00000570215 XRN1Q8IZH2 1706 aaKnown RBP21.82■■□□□ 1.08
KARS-212ENST00000570215 SPATA31E1Q6ZUB1 1445 aa21.81■■□□□ 1.08
KARS-212ENST00000570215 VGFO15240 615 aaPredicted RBP21.81■■□□□ 1.08
KARS-212ENST00000570215 ROBO1Q9Y6N7 1651 aa21.81■■□□□ 1.08
KARS-212ENST00000570215 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
KARS-212ENST00000570215 FAM135BQ49AJ0 1406 aa21.8■■□□□ 1.08
KARS-212ENST00000570215 SETD1AO15047 1707 aaKnown RBP21.8■■□□□ 1.08
KARS-212ENST00000570215 SLAIN2Q9P270 581 aa21.8■■□□□ 1.08
KARS-212ENST00000570215 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
KARS-212ENST00000570215 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.79■■□□□ 1.08
KARS-212ENST00000570215 NCOA3Q9Y6Q9 1424 aa21.77■■□□□ 1.08
KARS-212ENST00000570215 MED1Q15648 1581 aaPredicted RBP21.76■■□□□ 1.07
KARS-212ENST00000570215 C19orf44Q9H6X5 657 aa21.76■■□□□ 1.07
KARS-212ENST00000570215 IFT172Q9UG01 1749 aa21.75■■□□□ 1.07
KARS-212ENST00000570215 ATF3P18847 181 aa21.72■■□□□ 1.07
KARS-212ENST00000570215 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
KARS-212ENST00000570215 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
KARS-212ENST00000570215 CADPS2Q86UW7 1296 aa21.7■■□□□ 1.06
KARS-212ENST00000570215 ANKRD30BQ9BXX2 1392 aa21.69■■□□□ 1.06
KARS-212ENST00000570215 NALCNQ8IZF0 1738 aa21.69■■□□□ 1.06
KARS-212ENST00000570215 TMEM132EQ6IEE7 984 aa21.68■■□□□ 1.06
KARS-212ENST00000570215 HRCP23327 699 aa21.67■■□□□ 1.06
KARS-212ENST00000570215 PHLPP1O60346 1717 aa21.66■■□□□ 1.06
KARS-212ENST00000570215 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
KARS-212ENST00000570215 ADGRL3Q9HAR2 1447 aa21.65■■□□□ 1.06
KARS-212ENST00000570215 MSH5O43196 834 aa21.65■■□□□ 1.06
KARS-212ENST00000570215 BRINP3Q76B58 766 aa21.65■■□□□ 1.06
KARS-212ENST00000570215 STK26Q9P289 416 aa21.65■■□□□ 1.06
KARS-212ENST00000570215 PIK3C2GO75747 1445 aa21.64■■□□□ 1.06
KARS-212ENST00000570215 MST1RQ04912 1400 aa21.64■■□□□ 1.06
KARS-212ENST00000570215 PTCH1Q13635 1447 aa21.63■■□□□ 1.05
KARS-212ENST00000570215 DCCP43146 1447 aa21.62■■□□□ 1.05
KARS-212ENST00000570215 COL16A1Q07092 1604 aaPredicted RBP21.62■■□□□ 1.05
KARS-212ENST00000570215 CFAP70Q5T0N1 1121 aa21.61■■□□□ 1.05
KARS-212ENST00000570215 WAPLQ7Z5K2 1190 aa21.61■■□□□ 1.05
KARS-212ENST00000570215 DDX17Q92841 729 aaKnown RBP21.61■■□□□ 1.05
KARS-212ENST00000570215 PRAG1Q86YV5 1406 aa21.59■■□□□ 1.05
KARS-212ENST00000570215 PLEKHH1Q9ULM0 1364 aa21.59■■□□□ 1.05
KARS-212ENST00000570215 NRXN1Q9ULB1 1477 aa21.58■■□□□ 1.05
KARS-212ENST00000570215 C14orf93Q9H972 538 aaKnown RBP21.58■■□□□ 1.05
KARS-212ENST00000570215 RGS17Q9UGC6 210 aaPredicted RBP21.58■■□□□ 1.05
KARS-212ENST00000570215 KDM2AQ9Y2K7 1162 aa21.58■■□□□ 1.05
KARS-212ENST00000570215 AHDC1Q5TGY3 1603 aaPredicted RBP21.57■■□□□ 1.04
KARS-212ENST00000570215 LRPPRCP42704 1394 aaKnown RBP21.57■■□□□ 1.04
KARS-212ENST00000570215 MYOM2P54296 1465 aa21.57■■□□□ 1.04
KARS-212ENST00000570215 DCAF11Q8TEB1 546 aa21.55■■□□□ 1.04
KARS-212ENST00000570215 ORAI2Q96SN7 254 aa21.55■■□□□ 1.04
KARS-212ENST00000570215 C1orf167Q5SNV9 1468 aa21.55■■□□□ 1.04
KARS-212ENST00000570215 YTHDC2Q9H6S0 1430 aaKnown RBP21.55■■□□□ 1.04
KARS-212ENST00000570215 TECPR2O15040 1411 aa21.54■■□□□ 1.04
KARS-212ENST00000570215 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms