RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 SMC4Q9NTJ3 1288 aa26.18■■□□□ 1.78
SCRT1-201ENST00000569446 LRRIQ1Q96JM4 1722 aa26.17■■□□□ 1.78
SCRT1-201ENST00000569446 ADGRF5Q8IZF2 1346 aa26.17■■□□□ 1.78
SCRT1-201ENST00000569446 MFAP1P55081 439 aaKnown RBP26.17■■□□□ 1.78
SCRT1-201ENST00000569446 TCP11L2Q8N4U5 519 aa26.17■■□□□ 1.78
SCRT1-201ENST00000569446 MS4A1P11836 297 aa26.16■■□□□ 1.78
SCRT1-201ENST00000569446 DUSP27Q5VZP5 1158 aa26.16■■□□□ 1.78
SCRT1-201ENST00000569446 CCDC141Q6ZP82 1450 aa26.16■■□□□ 1.78
SCRT1-201ENST00000569446 BECN1Q14457 450 aa26.16■■□□□ 1.78
SCRT1-201ENST00000569446 NFKBIBQ15653 356 aa26.16■■□□□ 1.78
SCRT1-201ENST00000569446 E9PSI1 815 aa26.15■■□□□ 1.78
SCRT1-201ENST00000569446 TSR2Q969E8 191 aaKnown RBP26.15■■□□□ 1.78
SCRT1-201ENST00000569446 DNMT1P26358 1616 aaKnown RBP26.13■■□□□ 1.77
SCRT1-201ENST00000569446 FRAT2O75474 233 aaPredicted RBP26.13■■□□□ 1.77
SCRT1-201ENST00000569446 BRPF3Q9ULD4 1205 aa26.12■■□□□ 1.77
SCRT1-201ENST00000569446 FOXD4L1Q9NU39 408 aa26.12■■□□□ 1.77
SCRT1-201ENST00000569446 DMRT2Q9Y5R5 561 aa26.11■■□□□ 1.77
SCRT1-201ENST00000569446 EIF3AQ14152 1382 aaKnown RBP26.11■■□□□ 1.77
SCRT1-201ENST00000569446 RALGAPBQ86X10 1494 aa26.1■■□□□ 1.77
SCRT1-201ENST00000569446 ESF1Q9H501 851 aaKnown RBP26.1■■□□□ 1.77
SCRT1-201ENST00000569446 TNNQ9UQP3 1299 aa26.1■■□□□ 1.77
SCRT1-201ENST00000569446 PRAG1Q86YV5 1406 aa26.09■■□□□ 1.77
SCRT1-201ENST00000569446 PLEKHH1Q9ULM0 1364 aa26.09■■□□□ 1.77
SCRT1-201ENST00000569446 SLFN5Q08AF3 891 aa26.08■■□□□ 1.77
SCRT1-201ENST00000569446 TPRNQ4KMQ1 711 aa26.08■■□□□ 1.77
SCRT1-201ENST00000569446 AMER1Q5JTC6 1135 aaPredicted RBP26.07■■□□□ 1.76
SCRT1-201ENST00000569446 PARD3Q8TEW0 1356 aa26.06■■□□□ 1.76
SCRT1-201ENST00000569446 RAPGEF3O95398 923 aa26.06■■□□□ 1.76
SCRT1-201ENST00000569446 FBLN1P23142 703 aa26.05■■□□□ 1.76
SCRT1-201ENST00000569446 GCC2Q8IWJ2 1684 aa26.05■■□□□ 1.76
SCRT1-201ENST00000569446 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
SCRT1-201ENST00000569446 IGHDP01880 384 aa26.04■■□□□ 1.76
SCRT1-201ENST00000569446 SYCP2Q9BX26 1530 aa26.03■■□□□ 1.76
SCRT1-201ENST00000569446 GSE1Q14687 1217 aa26.02■■□□□ 1.76
SCRT1-201ENST00000569446 LRPPRCP42704 1394 aaKnown RBP26.01■■□□□ 1.75
SCRT1-201ENST00000569446 WWC1Q8IX03 1113 aa26.01■■□□□ 1.75
SCRT1-201ENST00000569446 FAM135AQ9P2D6 1515 aa26.01■■□□□ 1.75
SCRT1-201ENST00000569446 HMOX1P09601 288 aa26.01■■□□□ 1.75
SCRT1-201ENST00000569446 RNF123Q5XPI4 1314 aa26■■□□□ 1.75
SCRT1-201ENST00000569446 EIF4G3O43432 1585 aaKnown RBP26■■□□□ 1.75
SCRT1-201ENST00000569446 ZBTB7CA1YPR0 619 aa26■■□□□ 1.75
SCRT1-201ENST00000569446 CARD14Q9BXL6 1004 aa25.99■■□□□ 1.75
SCRT1-201ENST00000569446 RWDD1Q9H446 243 aaPredicted RBP25.99■■□□□ 1.75
SCRT1-201ENST00000569446 MYH16Q9H6N6 1097 aa25.98■■□□□ 1.75
SCRT1-201ENST00000569446 BCORL1Q5H9F3 1711 aa25.98■■□□□ 1.75
SCRT1-201ENST00000569446 CGNL1Q0VF96 1302 aa25.98■■□□□ 1.75
SCRT1-201ENST00000569446 RUNDC1Q96C34 613 aa25.97■■□□□ 1.75
SCRT1-201ENST00000569446 TRAPPC8Q9Y2L5 1435 aa25.95■■□□□ 1.75
SCRT1-201ENST00000569446 A2MP01023 1474 aa25.94■■□□□ 1.74
SCRT1-201ENST00000569446 ANO8Q9HCE9 1232 aaPredicted RBP25.94■■□□□ 1.74
SCRT1-201ENST00000569446 EXOSC9Q06265 439 aaKnown RBP25.94■■□□□ 1.74
SCRT1-201ENST00000569446 RIPK4P57078 832 aa25.94■■□□□ 1.74
SCRT1-201ENST00000569446 C14orf37Q86TY3 774 aa25.93■■□□□ 1.74
SCRT1-201ENST00000569446 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
SCRT1-201ENST00000569446 LNPKQ9C0E8 428 aa25.93■■□□□ 1.74
SCRT1-201ENST00000569446 PDZRN3Q9UPQ7 1066 aa25.93■■□□□ 1.74
SCRT1-201ENST00000569446 PMFBP1Q8TBY8 1022 aa25.92■■□□□ 1.74
SCRT1-201ENST00000569446 C1orf115Q9H7X2 142 aa25.91■■□□□ 1.74
SCRT1-201ENST00000569446 NCLP19338 710 aaKnown RBP25.9■■□□□ 1.74
SCRT1-201ENST00000569446 THUMPD2Q9BTF0 503 aaKnown RBP25.9■■□□□ 1.74
SCRT1-201ENST00000569446 ZKSCAN2Q63HK3 967 aa25.9■■□□□ 1.74
SCRT1-201ENST00000569446 SEC24BO95487 1268 aa25.9■■□□□ 1.74
SCRT1-201ENST00000569446 DZIP1LQ8IYY4 767 aaKnown RBP25.89■■□□□ 1.73
SCRT1-201ENST00000569446 EVC2Q86UK5 1308 aa25.88■■□□□ 1.73
SCRT1-201ENST00000569446 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
SCRT1-201ENST00000569446 CYB5RLQ6IPT4 315 aa25.88■■□□□ 1.73
SCRT1-201ENST00000569446 NSD3Q9BZ95 1437 aa25.87■■□□□ 1.73
SCRT1-201ENST00000569446 HDGFL2Q7Z4V5 671 aaPredicted RBP25.86■■□□□ 1.73
SCRT1-201ENST00000569446 USP35Q9P2H5 1018 aa25.86■■□□□ 1.73
SCRT1-201ENST00000569446 HSP90AB1P08238 724 aaKnown RBP25.86■■□□□ 1.73
SCRT1-201ENST00000569446 RLBP1P12271 317 aa25.85■■□□□ 1.73
SCRT1-201ENST00000569446 VGFO15240 615 aaPredicted RBP25.84■■□□□ 1.73
SCRT1-201ENST00000569446 ANKRD45Q5TZF3 282 aa25.84■■□□□ 1.73
SCRT1-201ENST00000569446 ADGRL2O95490 1459 aa25.84■■□□□ 1.73
SCRT1-201ENST00000569446 PRAM1Q96QH2 718 aa25.84■■□□□ 1.73
SCRT1-201ENST00000569446 C8orf34Q49A92 452 aa25.82■■□□□ 1.72
SCRT1-201ENST00000569446 MBD5Q9P267 1494 aa25.82■■□□□ 1.72
SCRT1-201ENST00000569446 KDM5CP41229 1560 aa25.82■■□□□ 1.72
SCRT1-201ENST00000569446 TERF2IPQ9NYB0 399 aa25.82■■□□□ 1.72
SCRT1-201ENST00000569446 PCDHB15Q9Y5E8 787 aa25.82■■□□□ 1.72
SCRT1-201ENST00000569446 RARSP54136 660 aaKnown RBP25.82■■□□□ 1.72
SCRT1-201ENST00000569446 HSCBQ8IWL3 235 aa25.81■■□□□ 1.72
SCRT1-201ENST00000569446 ITSN2Q9NZM3 1697 aa25.81■■□□□ 1.72
SCRT1-201ENST00000569446 NOB1Q9ULX3 412 aaKnown RBP25.79■■□□□ 1.72
SCRT1-201ENST00000569446 CABP1Q9NZU7 370 aa25.78■■□□□ 1.72
SCRT1-201ENST00000569446 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
SCRT1-201ENST00000569446 NUP160Q12769 1436 aa25.77■■□□□ 1.72
SCRT1-201ENST00000569446 DIAPH1O60610 1272 aaKnown RBP25.77■■□□□ 1.72
SCRT1-201ENST00000569446 ABCC10Q5T3U5 1492 aa25.76■■□□□ 1.71
SCRT1-201ENST00000569446 PDE3AQ14432 1141 aa25.76■■□□□ 1.71
SCRT1-201ENST00000569446 COL17A1Q9UMD9 1497 aaPredicted RBP25.75■■□□□ 1.71
SCRT1-201ENST00000569446 MAGI2Q86UL8 1455 aa25.75■■□□□ 1.71
SCRT1-201ENST00000569446 NOS1P29475 1434 aa25.74■■□□□ 1.71
SCRT1-201ENST00000569446 PRKAR2BP31323 418 aa25.74■■□□□ 1.71
SCRT1-201ENST00000569446 SLC4A10Q6U841 1118 aa25.74■■□□□ 1.71
SCRT1-201ENST00000569446 IPO8O15397 1037 aaKnown RBP25.74■■□□□ 1.71
SCRT1-201ENST00000569446 FOXD4L5Q5VV16 416 aaPredicted RBP25.74■■□□□ 1.71
SCRT1-201ENST00000569446 FOXD4L4Q8WXT5 416 aaPredicted RBP25.74■■□□□ 1.71
SCRT1-201ENST00000569446 WAPLQ7Z5K2 1190 aa25.73■■□□□ 1.71
SCRT1-201ENST00000569446 FBXO31Q5XUX0 539 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms