RNA–Protein interactions for RNA: ENST00000569098.1

TNRC6A-216, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 587 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-216ENST00000569098 GOLGA8CPA6NN73 597 aa8.87□□□□□ -0.99
TNRC6A-216ENST00000569098 HIC1Q14526 733 aa8.87□□□□□ -0.99
TNRC6A-216ENST00000569098 NUDT18Q6ZVK8 323 aa8.87□□□□□ -0.99
TNRC6A-216ENST00000569098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.87□□□□□ -0.99
TNRC6A-216ENST00000569098 EYA1Q99502 592 aa8.87□□□□□ -0.99
TNRC6A-216ENST00000569098 PNMA3Q9UL41 463 aa8.87□□□□□ -0.99
TNRC6A-216ENST00000569098 BIVM-ERCC5R4GMW8 1640 aa8.87□□□□□ -0.99
TNRC6A-216ENST00000569098 GPIHBP1Q8IV16 184 aa8.86□□□□□ -0.99
TNRC6A-216ENST00000569098 HCSTQ9UBK5 93 aa8.86□□□□□ -0.99
TNRC6A-216ENST00000569098 CEP164Q9UPV0 1460 aa8.85□□□□□ -0.99
TNRC6A-216ENST00000569098 SOWAHBA6NEL2 793 aa8.85□□□□□ -0.99
TNRC6A-216ENST00000569098 FECHP22830 423 aa8.85□□□□□ -0.99
TNRC6A-216ENST00000569098 ANKK1Q8NFD2 765 aa8.85□□□□□ -0.99
TNRC6A-216ENST00000569098 ADGRG1Q9Y653 693 aa8.85□□□□□ -0.99
TNRC6A-216ENST00000569098 GOLGA3Q08378 1498 aa8.84□□□□□ -0.99
TNRC6A-216ENST00000569098 GNPATO15228 680 aa8.84□□□□□ -0.99
TNRC6A-216ENST00000569098 TULP1O00294 542 aaPredicted RBP8.83□□□□□ -1
TNRC6A-216ENST00000569098 BCAMP50895 628 aa8.83□□□□□ -1
TNRC6A-216ENST00000569098 FAM161AQ3B820 660 aa8.83□□□□□ -1
TNRC6A-216ENST00000569098 CUX1P39880 1505 aa8.83□□□□□ -1
TNRC6A-216ENST00000569098 RUSC2Q8N2Y8 1516 aa8.82□□□□□ -1
TNRC6A-216ENST00000569098 TRIM26Q12899 539 aaPredicted RBP8.82□□□□□ -1
TNRC6A-216ENST00000569098 KIF27Q86VH2 1401 aa8.81□□□□□ -1
TNRC6A-216ENST00000569098 KIF21BO75037 1637 aa8.81□□□□□ -1
TNRC6A-216ENST00000569098 PTPN5P54829 565 aa8.81□□□□□ -1
TNRC6A-216ENST00000569098 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
TNRC6A-216ENST00000569098 LAMC3Q9Y6N6 1575 aa8.81□□□□□ -1
TNRC6A-216ENST00000569098 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
TNRC6A-216ENST00000569098 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
TNRC6A-216ENST00000569098 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
TNRC6A-216ENST00000569098 PRDM2Q13029 1718 aa8.8□□□□□ -1
TNRC6A-216ENST00000569098 RBM46Q8TBY0 533 aaKnown RBP8.79□□□□□ -1
TNRC6A-216ENST00000569098 LRCH3Q96II8 777 aa8.79□□□□□ -1
TNRC6A-216ENST00000569098 PDS5BQ9NTI5 1447 aa8.79□□□□□ -1
TNRC6A-216ENST00000569098 PRXQ9BXM0 1461 aa8.78□□□□□ -1
TNRC6A-216ENST00000569098 PXYLP1Q8TE99 480 aa8.78□□□□□ -1
TNRC6A-216ENST00000569098 CEP162Q5TB80 1403 aa8.78□□□□□ -1
TNRC6A-216ENST00000569098 ERICH3Q5RHP9 1530 aa8.77□□□□□ -1.01
TNRC6A-216ENST00000569098 UBTFP17480 764 aaKnown RBP8.77□□□□□ -1.01
TNRC6A-216ENST00000569098 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
TNRC6A-216ENST00000569098 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
TNRC6A-216ENST00000569098 RCCD1A6NED2 376 aa8.76□□□□□ -1.01
TNRC6A-216ENST00000569098 OATP04181 439 aa8.76□□□□□ -1.01
TNRC6A-216ENST00000569098 SWT1Q5T5J6 900 aaKnown RBP8.76□□□□□ -1.01
TNRC6A-216ENST00000569098 TMEM134Q9H6X4 195 aa8.76□□□□□ -1.01
TNRC6A-216ENST00000569098 TSR3Q9UJK0 312 aaKnown RBP8.76□□□□□ -1.01
TNRC6A-216ENST00000569098 DNAJB2P25686 324 aa8.75□□□□□ -1.01
TNRC6A-216ENST00000569098 PHOX2BQ99453 314 aa8.75□□□□□ -1.01
TNRC6A-216ENST00000569098 HPS5Q9UPZ3 1129 aa8.75□□□□□ -1.01
TNRC6A-216ENST00000569098 MAP2K5Q13163 448 aa8.74□□□□□ -1.01
TNRC6A-216ENST00000569098 PCGF6Q9BYE7 350 aa8.74□□□□□ -1.01
TNRC6A-216ENST00000569098 IGF1RP08069 1367 aa8.73□□□□□ -1.01
TNRC6A-216ENST00000569098 DNMBPQ6XZF7 1577 aa8.73□□□□□ -1.01
TNRC6A-216ENST00000569098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.73□□□□□ -1.01
TNRC6A-216ENST00000569098 NYAP1Q6ZVC0 841 aa8.73□□□□□ -1.01
TNRC6A-216ENST00000569098 ZC3H15Q8WU90 426 aaKnown RBP8.73□□□□□ -1.01
TNRC6A-216ENST00000569098 FGD5Q6ZNL6 1462 aa8.72□□□□□ -1.01
TNRC6A-216ENST00000569098 RAPGEF2Q9Y4G8 1499 aa8.71□□□□□ -1.01
TNRC6A-216ENST00000569098 TOPBP1Q92547 1522 aa8.71□□□□□ -1.01
TNRC6A-216ENST00000569098 IRF6O14896 467 aa8.71□□□□□ -1.02
TNRC6A-216ENST00000569098 ZMYND10O75800 440 aa8.71□□□□□ -1.02
TNRC6A-216ENST00000569098 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.02
TNRC6A-216ENST00000569098 PPP4CP60510 307 aa8.71□□□□□ -1.02
TNRC6A-216ENST00000569098 SLF2Q8IX21 1173 aa8.71□□□□□ -1.02
TNRC6A-216ENST00000569098 ABCA10Q8WWZ4 1543 aa8.7□□□□□ -1.02
TNRC6A-216ENST00000569098 NESP48681 1621 aa8.7□□□□□ -1.02
TNRC6A-216ENST00000569098 BCANQ96GW7 911 aa8.7□□□□□ -1.02
TNRC6A-216ENST00000569098 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
TNRC6A-216ENST00000569098 CLIP1P30622 1438 aa8.7□□□□□ -1.02
TNRC6A-216ENST00000569098 CUX2O14529 1486 aa8.7□□□□□ -1.02
TNRC6A-216ENST00000569098 BARGINQ6ZT62 677 aa8.69□□□□□ -1.02
TNRC6A-216ENST00000569098 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
TNRC6A-216ENST00000569098 APLP1P51693 650 aa8.68□□□□□ -1.02
TNRC6A-216ENST00000569098 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
TNRC6A-216ENST00000569098 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
TNRC6A-216ENST00000569098 RNF40O75150 1001 aa8.67□□□□□ -1.02
TNRC6A-216ENST00000569098 ITGBL1O95965 494 aaPredicted RBP8.67□□□□□ -1.02
TNRC6A-216ENST00000569098 SLC10A3P09131 477 aa8.67□□□□□ -1.02
TNRC6A-216ENST00000569098 CARMIL1Q5VZK9 1371 aa8.67□□□□□ -1.02
TNRC6A-216ENST00000569098 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
TNRC6A-216ENST00000569098 URB2Q14146 1524 aaKnown RBP8.66□□□□□ -1.02
TNRC6A-216ENST00000569098 VPS8Q8N3P4 1428 aa8.66□□□□□ -1.02
TNRC6A-216ENST00000569098 HRCP23327 699 aa8.66□□□□□ -1.02
TNRC6A-216ENST00000569098 IFFO2Q5TF58 517 aa8.66□□□□□ -1.02
TNRC6A-216ENST00000569098 NECTIN2Q92692 538 aa8.65□□□□□ -1.02
TNRC6A-216ENST00000569098 DAXXQ9UER7 740 aaPredicted RBP8.65□□□□□ -1.02
TNRC6A-216ENST00000569098 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
TNRC6A-216ENST00000569098 TJAP1Q5JTD0 557 aa8.63□□□□□ -1.03
TNRC6A-216ENST00000569098 MRC2Q9UBG0 1479 aa8.62□□□□□ -1.03
TNRC6A-216ENST00000569098 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
TNRC6A-216ENST00000569098 RAD54L2Q9Y4B4 1467 aa8.61□□□□□ -1.03
TNRC6A-216ENST00000569098 CFHP08603 1231 aa8.6□□□□□ -1.03
TNRC6A-216ENST00000569098 ZEB1P37275 1124 aaPredicted RBP8.6□□□□□ -1.03
TNRC6A-216ENST00000569098 MTRQ99707 1265 aa8.6□□□□□ -1.03
TNRC6A-216ENST00000569098 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
TNRC6A-216ENST00000569098 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
TNRC6A-216ENST00000569098 DDX11L8A8MPP1 907 aa8.58□□□□□ -1.04
TNRC6A-216ENST00000569098 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
TNRC6A-216ENST00000569098 PRR14Q9BWN1 585 aa8.58□□□□□ -1.04
TNRC6A-216ENST00000569098 CUL7Q14999 1698 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms