RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.37
FANCA-231ENST00000568626 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.37
FANCA-231ENST00000568626 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
FANCA-231ENST00000568626 HDGFP51858 240 aaKnown RBP17.38■□□□□ 0.37
FANCA-231ENST00000568626 ZNF326Q5BKZ1 582 aaKnown RBP17.38■□□□□ 0.37
FANCA-231ENST00000568626 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
FANCA-231ENST00000568626 MYOM2P54296 1465 aa17.37■□□□□ 0.37
FANCA-231ENST00000568626 STRCQ7RTU9 1775 aa17.37■□□□□ 0.37
FANCA-231ENST00000568626 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
FANCA-231ENST00000568626 NEUROD1Q13562 356 aa17.36■□□□□ 0.37
FANCA-231ENST00000568626 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.36■□□□□ 0.37
FANCA-231ENST00000568626 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
FANCA-231ENST00000568626 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
FANCA-231ENST00000568626 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
FANCA-231ENST00000568626 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
FANCA-231ENST00000568626 ANKLE2Q86XL3 938 aa17.33■□□□□ 0.36
FANCA-231ENST00000568626 CERKQ8TCT0 537 aa17.33■□□□□ 0.36
FANCA-231ENST00000568626 MED14O60244 1454 aa17.31■□□□□ 0.36
FANCA-231ENST00000568626 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
FANCA-231ENST00000568626 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
FANCA-231ENST00000568626 SETBP1Q9Y6X0 1596 aa17.31■□□□□ 0.36
FANCA-231ENST00000568626 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
FANCA-231ENST00000568626 PLEKHG1Q9ULL1 1385 aa17.3■□□□□ 0.36
FANCA-231ENST00000568626 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
FANCA-231ENST00000568626 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
FANCA-231ENST00000568626 LAMC1P11047 1609 aa17.29■□□□□ 0.36
FANCA-231ENST00000568626 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
FANCA-231ENST00000568626 DIP2AQ14689 1571 aa17.28■□□□□ 0.36
FANCA-231ENST00000568626 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
FANCA-231ENST00000568626 LTKP29376 864 aa17.27■□□□□ 0.36
FANCA-231ENST00000568626 DCAF11Q8TEB1 546 aa17.27■□□□□ 0.36
FANCA-231ENST00000568626 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.35
FANCA-231ENST00000568626 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
FANCA-231ENST00000568626 KIAA1210Q9ULL0 1709 aa17.25■□□□□ 0.35
FANCA-231ENST00000568626 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
FANCA-231ENST00000568626 ADGRF5Q8IZF2 1346 aa17.23■□□□□ 0.35
FANCA-231ENST00000568626 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
FANCA-231ENST00000568626 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
FANCA-231ENST00000568626 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
FANCA-231ENST00000568626 ADAMTS13Q76LX8 1427 aa17.21■□□□□ 0.35
FANCA-231ENST00000568626 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
FANCA-231ENST00000568626 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
FANCA-231ENST00000568626 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
FANCA-231ENST00000568626 TRPM1Q7Z4N2 1603 aa17.19■□□□□ 0.34
FANCA-231ENST00000568626 BCANQ96GW7 911 aa17.19■□□□□ 0.34
FANCA-231ENST00000568626 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
FANCA-231ENST00000568626 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
FANCA-231ENST00000568626 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
FANCA-231ENST00000568626 C14orf93Q9H972 538 aaKnown RBP17.17■□□□□ 0.34
FANCA-231ENST00000568626 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
FANCA-231ENST00000568626 ASXL1Q8IXJ9 1541 aa17.15■□□□□ 0.34
FANCA-231ENST00000568626 ADGRB1O14514 1584 aa17.15■□□□□ 0.34
FANCA-231ENST00000568626 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
FANCA-231ENST00000568626 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
FANCA-231ENST00000568626 KNDC1Q76NI1 1749 aa17.13■□□□□ 0.33
FANCA-231ENST00000568626 CFAP70Q5T0N1 1121 aa17.12■□□□□ 0.33
FANCA-231ENST00000568626 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
FANCA-231ENST00000568626 GPRASP1Q5JY77 1395 aa17.12■□□□□ 0.33
FANCA-231ENST00000568626 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
FANCA-231ENST00000568626 LTBP4Q8N2S1 1624 aa17.11■□□□□ 0.33
FANCA-231ENST00000568626 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
FANCA-231ENST00000568626 ROCK2O75116 1388 aaKnown RBP17.11■□□□□ 0.33
FANCA-231ENST00000568626 METP08581 1390 aa17.11■□□□□ 0.33
FANCA-231ENST00000568626 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
FANCA-231ENST00000568626 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
FANCA-231ENST00000568626 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
FANCA-231ENST00000568626 TECPR2O15040 1411 aa17.09■□□□□ 0.33
FANCA-231ENST00000568626 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
FANCA-231ENST00000568626 CPS1P31327 1500 aa17.08■□□□□ 0.32
FANCA-231ENST00000568626 DLC1Q96QB1 1528 aa17.08■□□□□ 0.32
FANCA-231ENST00000568626 PTCH1Q13635 1447 aa17.08■□□□□ 0.32
FANCA-231ENST00000568626 ABCC11Q96J66 1382 aa17.06■□□□□ 0.32
FANCA-231ENST00000568626 KCNA6P17658 529 aa17.06■□□□□ 0.32
FANCA-231ENST00000568626 PTPRUQ92729 1446 aa17.05■□□□□ 0.32
FANCA-231ENST00000568626 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
FANCA-231ENST00000568626 EIF3AQ14152 1382 aaKnown RBP17.04■□□□□ 0.32
FANCA-231ENST00000568626 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
FANCA-231ENST00000568626 TMEM132EQ6IEE7 984 aa17.04■□□□□ 0.32
FANCA-231ENST00000568626 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
FANCA-231ENST00000568626 STRCP1A6NGW2 1772 aa17.03■□□□□ 0.32
FANCA-231ENST00000568626 CARD11Q9BXL7 1154 aa17.03■□□□□ 0.32
FANCA-231ENST00000568626 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
FANCA-231ENST00000568626 FAM135BQ49AJ0 1406 aa17.03■□□□□ 0.32
FANCA-231ENST00000568626 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
FANCA-231ENST00000568626 SIRT1Q96EB6 747 aa17.01■□□□□ 0.31
FANCA-231ENST00000568626 DISP3Q9P2K9 1392 aa17■□□□□ 0.31
FANCA-231ENST00000568626 STK26Q9P289 416 aa16.99■□□□□ 0.31
FANCA-231ENST00000568626 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
FANCA-231ENST00000568626 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
FANCA-231ENST00000568626 USP47Q96K76 1375 aa16.98■□□□□ 0.31
FANCA-231ENST00000568626 IQSEC2Q5JU85 1478 aa16.98■□□□□ 0.31
FANCA-231ENST00000568626 SOCS7O14512 581 aa16.97■□□□□ 0.31
FANCA-231ENST00000568626 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
FANCA-231ENST00000568626 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.31
FANCA-231ENST00000568626 QRICH2Q9H0J4 1663 aa16.96■□□□□ 0.31
FANCA-231ENST00000568626 SBNO2Q9Y2G9 1366 aa16.95■□□□□ 0.3
FANCA-231ENST00000568626 CENPJQ9HC77 1338 aaPredicted RBP16.95■□□□□ 0.3
FANCA-231ENST00000568626 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
FANCA-231ENST00000568626 UBAP1LF5GYI3 381 aa16.94■□□□□ 0.3
FANCA-231ENST00000568626 POGKQ9P215 609 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms