RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
ABCA3-205ENST00000567910 NEXMIFQ5QGS0 1516 aa15.79■□□□□ 0.12
ABCA3-205ENST00000567910 CHGAP10645 457 aaKnown RBP15.77■□□□□ 0.12
ABCA3-205ENST00000567910 NRXN3Q9Y4C0 1643 aa15.76■□□□□ 0.11
ABCA3-205ENST00000567910 NUTM2DQ5VT03 806 aaPredicted RBP15.76■□□□□ 0.11
ABCA3-205ENST00000567910 SPATA31E1Q6ZUB1 1445 aa15.76■□□□□ 0.11
ABCA3-205ENST00000567910 ACIN1Q9UKV3 1341 aaKnown RBP15.75■□□□□ 0.11
ABCA3-205ENST00000567910 ANKRD30BQ9BXX2 1392 aa15.75■□□□□ 0.11
ABCA3-205ENST00000567910 PLEKHG1Q9ULL1 1385 aa15.75■□□□□ 0.11
ABCA3-205ENST00000567910 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
ABCA3-205ENST00000567910 ADAMTS13Q76LX8 1427 aa15.74■□□□□ 0.11
ABCA3-205ENST00000567910 PPLO60437 1756 aa15.74■□□□□ 0.11
ABCA3-205ENST00000567910 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
ABCA3-205ENST00000567910 CCDC144AA2RUR9 1427 aa15.73■□□□□ 0.11
ABCA3-205ENST00000567910 IFT172Q9UG01 1749 aa15.73■□□□□ 0.11
ABCA3-205ENST00000567910 CERKQ8TCT0 537 aa15.71■□□□□ 0.11
ABCA3-205ENST00000567910 SETBP1Q9Y6X0 1596 aa15.7■□□□□ 0.1
ABCA3-205ENST00000567910 SLC26A8Q96RN1 970 aa15.7■□□□□ 0.1
ABCA3-205ENST00000567910 SETD1AO15047 1707 aaKnown RBP15.69■□□□□ 0.1
ABCA3-205ENST00000567910 XIRP1Q702N8 1843 aaKnown RBP15.69■□□□□ 0.1
ABCA3-205ENST00000567910 NWD1Q149M9 1564 aa15.69■□□□□ 0.1
ABCA3-205ENST00000567910 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
ABCA3-205ENST00000567910 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.68■□□□□ 0.1
ABCA3-205ENST00000567910 CHD2O14647 1828 aaKnown RBP15.68■□□□□ 0.1
ABCA3-205ENST00000567910 CPS1P31327 1500 aa15.68■□□□□ 0.1
ABCA3-205ENST00000567910 LRRC7Q96NW7 1537 aa15.67■□□□□ 0.1
ABCA3-205ENST00000567910 DIP2AQ14689 1571 aa15.66■□□□□ 0.1
ABCA3-205ENST00000567910 PPP1R15AO75807 674 aaPredicted RBP15.66■□□□□ 0.1
ABCA3-205ENST00000567910 CCER1Q8TC90 406 aaPredicted RBP15.65■□□□□ 0.1
ABCA3-205ENST00000567910 PTPRUQ92729 1446 aa15.65■□□□□ 0.1
ABCA3-205ENST00000567910 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
ABCA3-205ENST00000567910 ALKQ9UM73 1620 aa15.65■□□□□ 0.1
ABCA3-205ENST00000567910 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
ABCA3-205ENST00000567910 HDGFP51858 240 aaKnown RBP15.63■□□□□ 0.09
ABCA3-205ENST00000567910 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
ABCA3-205ENST00000567910 TBX22Q9Y458 520 aa15.63■□□□□ 0.09
ABCA3-205ENST00000567910 ADGRF5Q8IZF2 1346 aa15.63■□□□□ 0.09
ABCA3-205ENST00000567910 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
ABCA3-205ENST00000567910 METP08581 1390 aa15.62■□□□□ 0.09
ABCA3-205ENST00000567910 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
ABCA3-205ENST00000567910 NRXN1Q9ULB1 1477 aa15.61■□□□□ 0.09
ABCA3-205ENST00000567910 ASXL1Q8IXJ9 1541 aa15.6■□□□□ 0.09
ABCA3-205ENST00000567910 KCNA6P17658 529 aa15.6■□□□□ 0.09
ABCA3-205ENST00000567910 ILDR1Q86SU0 546 aaPredicted RBP15.6■□□□□ 0.09
ABCA3-205ENST00000567910 BCANQ96GW7 911 aa15.6■□□□□ 0.09
ABCA3-205ENST00000567910 PIK3C2GO75747 1445 aa15.6■□□□□ 0.09
ABCA3-205ENST00000567910 NKTRP30414 1462 aaKnown RBP15.59■□□□□ 0.09
ABCA3-205ENST00000567910 MYOM2P54296 1465 aa15.59■□□□□ 0.09
ABCA3-205ENST00000567910 FBXO41Q8TF61 875 aa15.58■□□□□ 0.08
ABCA3-205ENST00000567910 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.08
ABCA3-205ENST00000567910 PIK3R4Q99570 1358 aa15.58■□□□□ 0.08
ABCA3-205ENST00000567910 VGFO15240 615 aaPredicted RBP15.57■□□□□ 0.08
ABCA3-205ENST00000567910 TMEM94Q12767 1356 aa15.56■□□□□ 0.08
ABCA3-205ENST00000567910 PRAG1Q86YV5 1406 aa15.53■□□□□ 0.08
ABCA3-205ENST00000567910 SIN3AQ96ST3 1273 aa15.53■□□□□ 0.08
ABCA3-205ENST00000567910 AMOTL2Q9Y2J4 779 aa15.53■□□□□ 0.08
ABCA3-205ENST00000567910 CLSPNQ9HAW4 1339 aa15.5■□□□□ 0.07
ABCA3-205ENST00000567910 PROSER2Q86WR7 435 aaPredicted RBP15.5■□□□□ 0.07
ABCA3-205ENST00000567910 LAMC1P11047 1609 aa15.5■□□□□ 0.07
ABCA3-205ENST00000567910 ROBO2Q9HCK4 1378 aa15.49■□□□□ 0.07
ABCA3-205ENST00000567910 ADGRB1O14514 1584 aa15.49■□□□□ 0.07
ABCA3-205ENST00000567910 CFAP70Q5T0N1 1121 aa15.49■□□□□ 0.07
ABCA3-205ENST00000567910 DCAF11Q8TEB1 546 aa15.49■□□□□ 0.07
ABCA3-205ENST00000567910 PTCH1Q13635 1447 aa15.49■□□□□ 0.07
ABCA3-205ENST00000567910 KNDC1Q76NI1 1749 aa15.48■□□□□ 0.07
ABCA3-205ENST00000567910 NALCNQ8IZF0 1738 aa15.48■□□□□ 0.07
ABCA3-205ENST00000567910 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.48■□□□□ 0.07
ABCA3-205ENST00000567910 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
ABCA3-205ENST00000567910 C14orf93Q9H972 538 aaKnown RBP15.48■□□□□ 0.07
ABCA3-205ENST00000567910 TECPR2O15040 1411 aa15.47■□□□□ 0.07
ABCA3-205ENST00000567910 TMEM132EQ6IEE7 984 aa15.47■□□□□ 0.07
ABCA3-205ENST00000567910 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
ABCA3-205ENST00000567910 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
ABCA3-205ENST00000567910 LRPPRCP42704 1394 aaKnown RBP15.45■□□□□ 0.06
ABCA3-205ENST00000567910 YTHDC2Q9H6S0 1430 aaKnown RBP15.44■□□□□ 0.06
ABCA3-205ENST00000567910 L3MBTL2Q969R5 705 aa15.44■□□□□ 0.06
ABCA3-205ENST00000567910 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
ABCA3-205ENST00000567910 PLEKHH1Q9ULM0 1364 aa15.43■□□□□ 0.06
ABCA3-205ENST00000567910 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
ABCA3-205ENST00000567910 PIP4K2BP78356 416 aa15.42■□□□□ 0.06
ABCA3-205ENST00000567910 KIAA1210Q9ULL0 1709 aa15.42■□□□□ 0.06
ABCA3-205ENST00000567910 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
ABCA3-205ENST00000567910 MSH6P52701 1360 aa15.41■□□□□ 0.06
ABCA3-205ENST00000567910 TOM1O60784 492 aa15.41■□□□□ 0.06
ABCA3-205ENST00000567910 STK26Q9P289 416 aa15.41■□□□□ 0.06
ABCA3-205ENST00000567910 STAC3Q96MF2 364 aa15.4■□□□□ 0.06
ABCA3-205ENST00000567910 ROBO1Q9Y6N7 1651 aa15.4■□□□□ 0.06
ABCA3-205ENST00000567910 WAPLQ7Z5K2 1190 aa15.39■□□□□ 0.05
ABCA3-205ENST00000567910 C19orf44Q9H6X5 657 aa15.39■□□□□ 0.05
ABCA3-205ENST00000567910 DCCP43146 1447 aa15.39■□□□□ 0.05
ABCA3-205ENST00000567910 TRPM1Q7Z4N2 1603 aa15.39■□□□□ 0.05
ABCA3-205ENST00000567910 DLC1Q96QB1 1528 aa15.38■□□□□ 0.05
ABCA3-205ENST00000567910 ARHGEF28Q8N1W1 1705 aaKnown RBP15.38■□□□□ 0.05
ABCA3-205ENST00000567910 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
ABCA3-205ENST00000567910 MST1RQ04912 1400 aa15.37■□□□□ 0.05
ABCA3-205ENST00000567910 FAM135BQ49AJ0 1406 aa15.37■□□□□ 0.05
ABCA3-205ENST00000567910 NBPF1Q3BBV0 1214 aa15.37■□□□□ 0.05
ABCA3-205ENST00000567910 TONSLQ96HA7 1378 aa15.36■□□□□ 0.05
ABCA3-205ENST00000567910 SCAF1Q9H7N4 1312 aaKnown RBP15.36■□□□□ 0.05
ABCA3-205ENST00000567910 CDC42BPGQ6DT37 1551 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms