RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 ITGAEP38570 1179 aa14.66□□□□□ -0.06
CNOT1-207ENST00000565605 LTKP29376 864 aa14.64□□□□□ -0.07
CNOT1-207ENST00000565605 ROCK1Q13464 1354 aa14.63□□□□□ -0.07
CNOT1-207ENST00000565605 RGS17Q9UGC6 210 aaPredicted RBP14.63□□□□□ -0.07
CNOT1-207ENST00000565605 MROH1Q8NDA8 1641 aa14.63□□□□□ -0.07
CNOT1-207ENST00000565605 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
CNOT1-207ENST00000565605 ANKRD50Q9ULJ7 1429 aa14.62□□□□□ -0.07
CNOT1-207ENST00000565605 PRDM15P57071 1507 aaPredicted RBP14.61□□□□□ -0.07
CNOT1-207ENST00000565605 KANK1Q14678 1352 aa14.61□□□□□ -0.07
CNOT1-207ENST00000565605 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
CNOT1-207ENST00000565605 TXNDC2Q86VQ3 553 aa14.6□□□□□ -0.07
CNOT1-207ENST00000565605 SCAF11Q99590 1463 aaKnown RBP14.6□□□□□ -0.07
CNOT1-207ENST00000565605 UBR1Q8IWV7 1749 aa14.59□□□□□ -0.07
CNOT1-207ENST00000565605 SYNMO15061 1565 aa14.59□□□□□ -0.07
CNOT1-207ENST00000565605 ARHGAP23Q9P227 1491 aa14.58□□□□□ -0.08
CNOT1-207ENST00000565605 CEP152O94986 1710 aa14.57□□□□□ -0.08
CNOT1-207ENST00000565605 SLIT1O75093 1534 aa14.56□□□□□ -0.08
CNOT1-207ENST00000565605 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
CNOT1-207ENST00000565605 CFAP65Q6ZU64 1925 aaKnown RBP14.56□□□□□ -0.08
CNOT1-207ENST00000565605 FXR2P51116 673 aaKnown RBP eCLIP14.54□□□□□ -0.082e-9■■■■□ 22.9
CNOT1-207ENST00000565605 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
CNOT1-207ENST00000565605 ARHGAP31Q2M1Z3 1444 aa14.54□□□□□ -0.08
CNOT1-207ENST00000565605 LMTK2Q8IWU2 1503 aa14.54□□□□□ -0.08
CNOT1-207ENST00000565605 XIRP1Q702N8 1843 aaKnown RBP14.54□□□□□ -0.08
CNOT1-207ENST00000565605 TMEM2Q9UHN6 1383 aa14.53□□□□□ -0.08
CNOT1-207ENST00000565605 EVX2Q03828 476 aa14.53□□□□□ -0.08
CNOT1-207ENST00000565605 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
CNOT1-207ENST00000565605 EID1Q9Y6B2 187 aa14.53□□□□□ -0.08
CNOT1-207ENST00000565605 UNC13BO14795 1591 aa14.51□□□□□ -0.09
CNOT1-207ENST00000565605 FAM135BQ49AJ0 1406 aa14.51□□□□□ -0.09
CNOT1-207ENST00000565605 TMEM94Q12767 1356 aa14.51□□□□□ -0.09
CNOT1-207ENST00000565605 IDI1Q13907 227 aa14.51□□□□□ -0.09
CNOT1-207ENST00000565605 POTEAQ6S8J7 498 aa14.51□□□□□ -0.09
CNOT1-207ENST00000565605 SLC26A8Q96RN1 970 aa14.5□□□□□ -0.09
CNOT1-207ENST00000565605 PIK3C2BO00750 1634 aa14.5□□□□□ -0.09
CNOT1-207ENST00000565605 KCNA6P17658 529 aa14.49□□□□□ -0.09
CNOT1-207ENST00000565605 EFCAB6Q5THR3 1501 aa14.48□□□□□ -0.09
CNOT1-207ENST00000565605 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
CNOT1-207ENST00000565605 HFM1A2PYH4 1435 aa14.48□□□□□ -0.09
CNOT1-207ENST00000565605 NAIPQ13075 1403 aa14.48□□□□□ -0.09
CNOT1-207ENST00000565605 NUP155O75694 1391 aa14.47□□□□□ -0.09
CNOT1-207ENST00000565605 GCC2Q8IWJ2 1684 aa14.47□□□□□ -0.09
CNOT1-207ENST00000565605 TET3O43151 1660 aa14.46□□□□□ -0.09
CNOT1-207ENST00000565605 PROSER2Q86WR7 435 aaPredicted RBP14.46□□□□□ -0.09
CNOT1-207ENST00000565605 RPRD2Q5VT52 1461 aaKnown RBP14.45□□□□□ -0.1
CNOT1-207ENST00000565605 IQGAP3Q86VI3 1631 aa14.45□□□□□ -0.1
CNOT1-207ENST00000565605 ROBO1Q9Y6N7 1651 aa14.43□□□□□ -0.1
CNOT1-207ENST00000565605 NOS1P29475 1434 aa14.42□□□□□ -0.1
CNOT1-207ENST00000565605 TRIM52Q96A61 297 aa14.41□□□□□ -0.1
CNOT1-207ENST00000565605 SLAIN2Q9P270 581 aa14.41□□□□□ -0.1
CNOT1-207ENST00000565605 KDM5AP29375 1690 aaKnown RBP14.4□□□□□ -0.1
CNOT1-207ENST00000565605 BCANQ96GW7 911 aa14.39□□□□□ -0.11
CNOT1-207ENST00000565605 SLC52A1Q9NWF4 448 aa14.39□□□□□ -0.11
CNOT1-207ENST00000565605 E9PCH4 1651 aa14.39□□□□□ -0.11
CNOT1-207ENST00000565605 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
CNOT1-207ENST00000565605 NWD1Q149M9 1564 aa14.38□□□□□ -0.11
CNOT1-207ENST00000565605 NKTRP30414 1462 aaKnown RBP14.38□□□□□ -0.11
CNOT1-207ENST00000565605 MSH6P52701 1360 aa14.37□□□□□ -0.11
CNOT1-207ENST00000565605 ZFYVE9O95405 1425 aa14.36□□□□□ -0.11
CNOT1-207ENST00000565605 JCADQ9P266 1359 aa14.34□□□□□ -0.11
CNOT1-207ENST00000565605 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
CNOT1-207ENST00000565605 SETD5Q9C0A6 1442 aa14.34□□□□□ -0.11
CNOT1-207ENST00000565605 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
CNOT1-207ENST00000565605 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-207ENST00000565605 ACIN1Q9UKV3 1341 aaKnown RBP14.34□□□□□ -0.11
CNOT1-207ENST00000565605 SETD1AO15047 1707 aaKnown RBP14.33□□□□□ -0.12
CNOT1-207ENST00000565605 PHLPP1O60346 1717 aa14.33□□□□□ -0.12
CNOT1-207ENST00000565605 RIMS2Q9UQ26 1411 aa14.32□□□□□ -0.12
CNOT1-207ENST00000565605 PPP1R15AO75807 674 aaPredicted RBP14.32□□□□□ -0.12
CNOT1-207ENST00000565605 CHGAP10645 457 aaKnown RBP14.32□□□□□ -0.12
CNOT1-207ENST00000565605 LRP6O75581 1613 aa14.31□□□□□ -0.12
CNOT1-207ENST00000565605 NUTM2DQ5VT03 806 aaPredicted RBP14.31□□□□□ -0.12
CNOT1-207ENST00000565605 LHX8Q68G74 356 aa14.31□□□□□ -0.12
CNOT1-207ENST00000565605 TBX22Q9Y458 520 aa14.31□□□□□ -0.12
CNOT1-207ENST00000565605 COL16A1Q07092 1604 aaPredicted RBP14.3□□□□□ -0.12
CNOT1-207ENST00000565605 CHD2O14647 1828 aaKnown RBP14.3□□□□□ -0.12
CNOT1-207ENST00000565605 SPHKAPQ2M3C7 1700 aa14.29□□□□□ -0.12
CNOT1-207ENST00000565605 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
CNOT1-207ENST00000565605 ADAMTS13Q76LX8 1427 aa14.29□□□□□ -0.12
CNOT1-207ENST00000565605 TMEM131LA2VDJ0 1609 aa14.29□□□□□ -0.12
CNOT1-207ENST00000565605 MYO5BQ9ULV0 1848 aa14.29□□□□□ -0.12
CNOT1-207ENST00000565605 TRPM2O94759 1503 aa14.28□□□□□ -0.12
CNOT1-207ENST00000565605 HDGFP51858 240 aaKnown RBP14.28□□□□□ -0.12
CNOT1-207ENST00000565605 C14orf37Q86TY3 774 aa14.28□□□□□ -0.12
CNOT1-207ENST00000565605 NCOA3Q9Y6Q9 1424 aa14.27□□□□□ -0.12
CNOT1-207ENST00000565605 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.12
CNOT1-207ENST00000565605 UPF1Q92900 1129 aaKnown RBP eCLIP14.27□□□□□ -0.137e-7■□□□□ 10.3
CNOT1-207ENST00000565605 MPHOSPH9Q99550 1183 aa14.27□□□□□ -0.13
CNOT1-207ENST00000565605 C19orf44Q9H6X5 657 aa14.27□□□□□ -0.13
CNOT1-207ENST00000565605 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
CNOT1-207ENST00000565605 ZNF772Q68DY9 489 aaPredicted RBP14.25□□□□□ -0.13
CNOT1-207ENST00000565605 CADPS2Q86UW7 1296 aa14.25□□□□□ -0.13
CNOT1-207ENST00000565605 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.25□□□□□ -0.13
CNOT1-207ENST00000565605 ATF3P18847 181 aa14.24□□□□□ -0.13
CNOT1-207ENST00000565605 BRINP3Q76B58 766 aa14.24□□□□□ -0.13
CNOT1-207ENST00000565605 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.24□□□□□ -0.13
CNOT1-207ENST00000565605 PTPRUQ92729 1446 aa14.24□□□□□ -0.13
CNOT1-207ENST00000565605 CLTCL1P53675 1640 aa14.23□□□□□ -0.13
CNOT1-207ENST00000565605 AHDC1Q5TGY3 1603 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-207ENST00000565605 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms