RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PLA2R1Q13018 1463 aa26.31■■□□□ 1.8
MAP1LC3B-206ENST00000564844 ITSN2Q9NZM3 1697 aa26.31■■□□□ 1.8
MAP1LC3B-206ENST00000564844 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
MAP1LC3B-206ENST00000564844 CENPJQ9HC77 1338 aaPredicted RBP26.28■■□□□ 1.8
MAP1LC3B-206ENST00000564844 RSPH6AQ9H0K4 717 aa26.28■■□□□ 1.8
MAP1LC3B-206ENST00000564844 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
MAP1LC3B-206ENST00000564844 TRPM1Q7Z4N2 1603 aa26.27■■□□□ 1.8
MAP1LC3B-206ENST00000564844 PCDHB15Q9Y5E8 787 aa26.26■■□□□ 1.79
MAP1LC3B-206ENST00000564844 CROCC2H7BZ55 1655 aa26.26■■□□□ 1.79
MAP1LC3B-206ENST00000564844 NAP1L5Q96NT1 182 aaPredicted RBP26.25■■□□□ 1.79
MAP1LC3B-206ENST00000564844 TBC1D2Q9BYX2 928 aa26.25■■□□□ 1.79
MAP1LC3B-206ENST00000564844 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
MAP1LC3B-206ENST00000564844 RLBP1P12271 317 aa26.25■■□□□ 1.79
MAP1LC3B-206ENST00000564844 E9PSI1 815 aa26.24■■□□□ 1.79
MAP1LC3B-206ENST00000564844 CARMIL2Q6F5E8 1435 aa26.24■■□□□ 1.79
MAP1LC3B-206ENST00000564844 PLEKHH2Q8IVE3 1493 aa26.24■■□□□ 1.79
MAP1LC3B-206ENST00000564844 UPF2Q9HAU5 1272 aaKnown RBP26.23■■□□□ 1.79
MAP1LC3B-206ENST00000564844 ATP10BO94823 1461 aa26.23■■□□□ 1.79
MAP1LC3B-206ENST00000564844 GPRASP1Q5JY77 1395 aa26.23■■□□□ 1.79
MAP1LC3B-206ENST00000564844 CDC42BPAQ5VT25 1732 aa26.22■■□□□ 1.79
MAP1LC3B-206ENST00000564844 PTPRGP23470 1445 aa26.22■■□□□ 1.79
MAP1LC3B-206ENST00000564844 PDZRN3Q9UPQ7 1066 aa26.22■■□□□ 1.79
MAP1LC3B-206ENST00000564844 NKTRP30414 1462 aaKnown RBP26.21■■□□□ 1.79
MAP1LC3B-206ENST00000564844 CHGAP10645 457 aaKnown RBP26.21■■□□□ 1.79
MAP1LC3B-206ENST00000564844 TRMT2AQ8IZ69 625 aaKnown RBP26.2■■□□□ 1.79
MAP1LC3B-206ENST00000564844 XRCC6P12956 609 aaKnown RBP eCLIP26.2■■□□□ 1.78
MAP1LC3B-206ENST00000564844 MFAP1P55081 439 aaKnown RBP26.2■■□□□ 1.78
MAP1LC3B-206ENST00000564844 WDR7Q9Y4E6 1490 aa26.2■■□□□ 1.78
MAP1LC3B-206ENST00000564844 CGNL1Q0VF96 1302 aa26.19■■□□□ 1.78
MAP1LC3B-206ENST00000564844 WWC1Q8IX03 1113 aa26.18■■□□□ 1.78
MAP1LC3B-206ENST00000564844 EIF3AQ14152 1382 aaKnown RBP26.18■■□□□ 1.78
MAP1LC3B-206ENST00000564844 ANTXR1Q9H6X2 564 aa26.16■■□□□ 1.78
MAP1LC3B-206ENST00000564844 ABCC10Q5T3U5 1492 aa26.16■■□□□ 1.78
MAP1LC3B-206ENST00000564844 PLEKHG5O94827 1062 aa26.16■■□□□ 1.78
MAP1LC3B-206ENST00000564844 MAPK8IP3Q9UPT6 1336 aa26.15■■□□□ 1.78
MAP1LC3B-206ENST00000564844 GOLGA6L3A6NEY3 463 aa26.15■■□□□ 1.78
MAP1LC3B-206ENST00000564844 CARD14Q9BXL6 1004 aa26.15■■□□□ 1.78
MAP1LC3B-206ENST00000564844 L1TD1Q5T7N2 865 aaKnown RBP26.13■■□□□ 1.77
MAP1LC3B-206ENST00000564844 PRDM15P57071 1507 aaPredicted RBP26.12■■□□□ 1.77
MAP1LC3B-206ENST00000564844 PDE3AQ14432 1141 aa26.12■■□□□ 1.77
MAP1LC3B-206ENST00000564844 CFAP70Q5T0N1 1121 aa26.12■■□□□ 1.77
MAP1LC3B-206ENST00000564844 ADCY10Q96PN6 1610 aa26.12■■□□□ 1.77
MAP1LC3B-206ENST00000564844 SHANK2Q9UPX8 1470 aa26.11■■□□□ 1.77
MAP1LC3B-206ENST00000564844 TBC1D32Q96NH3 1257 aa26.11■■□□□ 1.77
MAP1LC3B-206ENST00000564844 CCDC141Q6ZP82 1450 aa26.1■■□□□ 1.77
MAP1LC3B-206ENST00000564844 CDCA8Q53HL2 280 aa26.1■■□□□ 1.77
MAP1LC3B-206ENST00000564844 RARSP54136 660 aaKnown RBP26.09■■□□□ 1.77
MAP1LC3B-206ENST00000564844 FOXD4L1Q9NU39 408 aa26.09■■□□□ 1.77
MAP1LC3B-206ENST00000564844 INSRP06213 1382 aa26.09■■□□□ 1.77
MAP1LC3B-206ENST00000564844 MCM4P33991 863 aa26.08■■□□□ 1.77
MAP1LC3B-206ENST00000564844 TCP11L2Q8N4U5 519 aa26.08■■□□□ 1.77
MAP1LC3B-206ENST00000564844 PNNQ9H307 717 aaKnown RBP26.08■■□□□ 1.77
MAP1LC3B-206ENST00000564844 AFAP1Q8N556 730 aa26.07■■□□□ 1.76
MAP1LC3B-206ENST00000564844 NUTM2DQ5VT03 806 aaPredicted RBP26.06■■□□□ 1.76
MAP1LC3B-206ENST00000564844 TRAK2O60296 914 aa26.05■■□□□ 1.76
MAP1LC3B-206ENST00000564844 PMFBP1Q8TBY8 1022 aa26.04■■□□□ 1.76
MAP1LC3B-206ENST00000564844 MORC1Q86VD1 984 aa26.04■■□□□ 1.76
MAP1LC3B-206ENST00000564844 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
MAP1LC3B-206ENST00000564844 TSR2Q969E8 191 aaKnown RBP26.03■■□□□ 1.76
MAP1LC3B-206ENST00000564844 C22orf23Q9BZE7 217 aa26.03■■□□□ 1.76
MAP1LC3B-206ENST00000564844 ASXL1Q8IXJ9 1541 aa26.02■■□□□ 1.76
MAP1LC3B-206ENST00000564844 SYNJ2O15056 1496 aa26.02■■□□□ 1.76
MAP1LC3B-206ENST00000564844 FTSJ3Q8IY81 847 aaKnown RBP26.02■■□□□ 1.76
MAP1LC3B-206ENST00000564844 SAFB2Q14151 953 aaKnown RBP eCLIP26.01■■□□□ 1.75
MAP1LC3B-206ENST00000564844 SLC12A5Q9H2X9 1139 aa26.01■■□□□ 1.75
MAP1LC3B-206ENST00000564844 RWDD1Q9H446 243 aaPredicted RBP26■■□□□ 1.75
MAP1LC3B-206ENST00000564844 VSIG10Q8N0Z9 540 aa26■■□□□ 1.75
MAP1LC3B-206ENST00000564844 ARHGAP5Q13017 1502 aa26■■□□□ 1.75
MAP1LC3B-206ENST00000564844 SAMD9LQ8IVG5 1584 aa25.99■■□□□ 1.75
MAP1LC3B-206ENST00000564844 NLRP1Q9C000 1473 aa25.99■■□□□ 1.75
MAP1LC3B-206ENST00000564844 RSPH4AQ5TD94 716 aa25.99■■□□□ 1.75
MAP1LC3B-206ENST00000564844 PIK3C2GO75747 1445 aa25.97■■□□□ 1.75
MAP1LC3B-206ENST00000564844 TRAK1Q9UPV9 953 aa25.96■■□□□ 1.75
MAP1LC3B-206ENST00000564844 MYO5CQ9NQX4 1742 aa25.96■■□□□ 1.75
MAP1LC3B-206ENST00000564844 MTHFSP49914 203 aa25.95■■□□□ 1.75
MAP1LC3B-206ENST00000564844 ITPRIPQ8IWB1 547 aa25.95■■□□□ 1.74
MAP1LC3B-206ENST00000564844 U2AF1L5P0DN76 240 aaPredicted RBP25.94■■□□□ 1.74
MAP1LC3B-206ENST00000564844 U2AF1Q01081 240 aaKnown RBP eCLIP25.94■■□□□ 1.741e-6■■□□□ 13.5
MAP1LC3B-206ENST00000564844 CHMP5Q9NZZ3 219 aa25.93■■□□□ 1.74
MAP1LC3B-206ENST00000564844 ABCA8O94911 1581 aa25.93■■□□□ 1.74
MAP1LC3B-206ENST00000564844 ADGRF5Q8IZF2 1346 aa25.93■■□□□ 1.74
MAP1LC3B-206ENST00000564844 KIF3BO15066 747 aa25.92■■□□□ 1.74
MAP1LC3B-206ENST00000564844 RUNDC1Q96C34 613 aa25.92■■□□□ 1.74
MAP1LC3B-206ENST00000564844 MYH16Q9H6N6 1097 aa25.92■■□□□ 1.74
MAP1LC3B-206ENST00000564844 PKNOX2Q96KN3 472 aa25.91■■□□□ 1.74
MAP1LC3B-206ENST00000564844 SMC4Q9NTJ3 1288 aa25.91■■□□□ 1.74
MAP1LC3B-206ENST00000564844 FSD2A1L4K1 749 aa25.9■■□□□ 1.74
MAP1LC3B-206ENST00000564844 HSCBQ8IWL3 235 aa25.9■■□□□ 1.74
MAP1LC3B-206ENST00000564844 SCAF11Q99590 1463 aaKnown RBP25.9■■□□□ 1.74
MAP1LC3B-206ENST00000564844 HSP90AA2PQ14568 343 aaPredicted RBP25.89■■□□□ 1.74
MAP1LC3B-206ENST00000564844 HSP90AA1P07900 732 aaKnown RBP25.89■■□□□ 1.74
MAP1LC3B-206ENST00000564844 TMEM132EQ6IEE7 984 aa25.89■■□□□ 1.74
MAP1LC3B-206ENST00000564844 ERBB4Q15303 1308 aa25.89■■□□□ 1.73
MAP1LC3B-206ENST00000564844 U2SURPO15042 1029 aaKnown RBP25.88■■□□□ 1.73
MAP1LC3B-206ENST00000564844 MVPQ14764 893 aaKnown RBP25.88■■□□□ 1.73
MAP1LC3B-206ENST00000564844 DZIP1LQ8IYY4 767 aaKnown RBP25.88■■□□□ 1.73
MAP1LC3B-206ENST00000564844 LNPKQ9C0E8 428 aa25.88■■□□□ 1.73
MAP1LC3B-206ENST00000564844 GRPEL1Q9HAV7 217 aa25.88■■□□□ 1.73
MAP1LC3B-206ENST00000564844 NUP160Q12769 1436 aa25.86■■□□□ 1.73
MAP1LC3B-206ENST00000564844 GAS2L3Q86XJ1 694 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms