RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 CDCA8Q53HL2 280 aa26.7■■□□□ 1.86
MSLN-205ENST00000563941 RCAN3Q9UKA8 241 aa26.69■■□□□ 1.86
MSLN-205ENST00000563941 UGGT1Q9NYU2 1555 aa26.69■■□□□ 1.86
MSLN-205ENST00000563941 EFCAB6Q5THR3 1501 aa26.68■■□□□ 1.86
MSLN-205ENST00000563941 EIF3AQ14152 1382 aaKnown RBP26.68■■□□□ 1.86
MSLN-205ENST00000563941 KIF1BO60333 1816 aa26.67■■□□□ 1.86
MSLN-205ENST00000563941 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
MSLN-205ENST00000563941 MAP3K4Q9Y6R4 1608 aa26.67■■□□□ 1.86
MSLN-205ENST00000563941 MYOM1P52179 1685 aa26.67■■□□□ 1.86
MSLN-205ENST00000563941 MYOM2P54296 1465 aa26.66■■□□□ 1.86
MSLN-205ENST00000563941 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
MSLN-205ENST00000563941 ABCA6Q8N139 1617 aa26.65■■□□□ 1.86
MSLN-205ENST00000563941 PPRC1Q5VV67 1664 aaKnown RBP26.64■■□□□ 1.86
MSLN-205ENST00000563941 ZNF518AQ6AHZ1 1483 aa26.63■■□□□ 1.85
MSLN-205ENST00000563941 IFT172Q9UG01 1749 aa26.63■■□□□ 1.85
MSLN-205ENST00000563941 CDCA7LQ96GN5 454 aa26.63■■□□□ 1.85
MSLN-205ENST00000563941 KDM5AP29375 1690 aaKnown RBP26.63■■□□□ 1.85
MSLN-205ENST00000563941 AMER1Q5JTC6 1135 aaPredicted RBP26.62■■□□□ 1.85
MSLN-205ENST00000563941 MROH2AA6NES4 1674 aa26.61■■□□□ 1.85
MSLN-205ENST00000563941 ASXL1Q8IXJ9 1541 aa26.61■■□□□ 1.85
MSLN-205ENST00000563941 LMTK2Q8IWU2 1503 aa26.61■■□□□ 1.85
MSLN-205ENST00000563941 PPP2R1AP30153 589 aa26.6■■□□□ 1.85
MSLN-205ENST00000563941 CFAP70Q5T0N1 1121 aa26.58■■□□□ 1.85
MSLN-205ENST00000563941 ADGRF5Q8IZF2 1346 aa26.58■■□□□ 1.84
MSLN-205ENST00000563941 EXOC6Q8TAG9 804 aa26.56■■□□□ 1.84
MSLN-205ENST00000563941 ADAMTS8Q9UP79 889 aa26.56■■□□□ 1.84
MSLN-205ENST00000563941 CFAP74Q9C0B2 1584 aa26.56■■□□□ 1.84
MSLN-205ENST00000563941 NPC1L1Q9UHC9 1359 aa26.54■■□□□ 1.84
MSLN-205ENST00000563941 NRXN1Q9ULB1 1477 aa26.53■■□□□ 1.84
MSLN-205ENST00000563941 ERVK-7P63135 1459 aa26.53■■□□□ 1.84
MSLN-205ENST00000563941 PIK3C2GO75747 1445 aa26.53■■□□□ 1.84
MSLN-205ENST00000563941 ADGRB3O60242 1522 aa26.52■■□□□ 1.84
MSLN-205ENST00000563941 WDR43Q15061 677 aaKnown RBP eCLIP26.52■■□□□ 1.84
MSLN-205ENST00000563941 POGZQ7Z3K3 1410 aa26.51■■□□□ 1.84
MSLN-205ENST00000563941 SLC24A1O60721 1099 aa26.51■■□□□ 1.83
MSLN-205ENST00000563941 CD109Q6YHK3 1445 aa26.5■■□□□ 1.83
MSLN-205ENST00000563941 MYO3AQ8NEV4 1616 aa26.5■■□□□ 1.83
MSLN-205ENST00000563941 ERICH6Q7L0X2 663 aa26.5■■□□□ 1.83
MSLN-205ENST00000563941 FRMPD1Q5SYB0 1578 aa26.5■■□□□ 1.83
MSLN-205ENST00000563941 HECW2Q9P2P5 1572 aa26.48■■□□□ 1.83
MSLN-205ENST00000563941 MLH3Q9UHC1 1453 aa26.48■■□□□ 1.83
MSLN-205ENST00000563941 NOS1P29475 1434 aa26.47■■□□□ 1.83
MSLN-205ENST00000563941 NPATQ14207 1427 aa26.46■■□□□ 1.83
MSLN-205ENST00000563941 PLEKHH1Q9ULM0 1364 aa26.45■■□□□ 1.82
MSLN-205ENST00000563941 SETBP1Q9Y6X0 1596 aa26.45■■□□□ 1.82
MSLN-205ENST00000563941 PPLO60437 1756 aa26.44■■□□□ 1.82
MSLN-205ENST00000563941 CFAP65Q6ZU64 1925 aaKnown RBP26.44■■□□□ 1.82
MSLN-205ENST00000563941 SBNO2Q9Y2G9 1366 aa26.43■■□□□ 1.82
MSLN-205ENST00000563941 PLIN1O60240 522 aa26.42■■□□□ 1.82
MSLN-205ENST00000563941 CHGAP10645 457 aaKnown RBP26.42■■□□□ 1.82
MSLN-205ENST00000563941 GGT6Q6P531 493 aa26.41■■□□□ 1.82
MSLN-205ENST00000563941 ZNF521Q96K83 1311 aa26.4■■□□□ 1.82
MSLN-205ENST00000563941 CARD14Q9BXL6 1004 aa26.38■■□□□ 1.81
MSLN-205ENST00000563941 ABCC3O15438 1527 aa26.38■■□□□ 1.81
MSLN-205ENST00000563941 CENPJQ9HC77 1338 aaPredicted RBP26.37■■□□□ 1.81
MSLN-205ENST00000563941 ZC3H13Q5T200 1668 aaKnown RBP26.37■■□□□ 1.81
MSLN-205ENST00000563941 DUSP27Q5VZP5 1158 aa26.36■■□□□ 1.81
MSLN-205ENST00000563941 CRBNQ96SW2 442 aa26.35■■□□□ 1.81
MSLN-205ENST00000563941 QRICH2Q9H0J4 1663 aa26.35■■□□□ 1.81
MSLN-205ENST00000563941 GOLGA2Q08379 1002 aa26.35■■□□□ 1.81
MSLN-205ENST00000563941 CAMSAP1Q5T5Y3 1602 aa26.34■■□□□ 1.81
MSLN-205ENST00000563941 ADGRB1O14514 1584 aa26.34■■□□□ 1.81
MSLN-205ENST00000563941 C14orf93Q9H972 538 aaKnown RBP26.33■■□□□ 1.81
MSLN-205ENST00000563941 TCERG1O14776 1098 aaKnown RBP26.32■■□□□ 1.8
MSLN-205ENST00000563941 CCDC146Q8IYE0 955 aa26.32■■□□□ 1.8
MSLN-205ENST00000563941 TRAK1Q9UPV9 953 aa26.32■■□□□ 1.8
MSLN-205ENST00000563941 NEO1Q92859 1461 aa26.31■■□□□ 1.8
MSLN-205ENST00000563941 SIGLEC1Q9BZZ2 1709 aa26.31■■□□□ 1.8
MSLN-205ENST00000563941 RPGRIP1LQ68CZ1 1315 aa26.3■■□□□ 1.8
MSLN-205ENST00000563941 ANP32AP39687 249 aaKnown RBP26.29■■□□□ 1.8
MSLN-205ENST00000563941 NOP58Q9Y2X3 529 aaKnown RBP26.29■■□□□ 1.8
MSLN-205ENST00000563941 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
MSLN-205ENST00000563941 SLFN5Q08AF3 891 aa26.27■■□□□ 1.8
MSLN-205ENST00000563941 C20orf194Q5TEA3 1177 aa26.27■■□□□ 1.8
MSLN-205ENST00000563941 PIK3C2BO00750 1634 aa26.27■■□□□ 1.8
MSLN-205ENST00000563941 DIP2CQ9Y2E4 1556 aa26.27■■□□□ 1.8
MSLN-205ENST00000563941 NSD3Q9BZ95 1437 aa26.26■■□□□ 1.79
MSLN-205ENST00000563941 RAPGEF3O95398 923 aa26.26■■□□□ 1.79
MSLN-205ENST00000563941 APAF1O14727 1248 aa26.25■■□□□ 1.79
MSLN-205ENST00000563941 TMEM132EQ6IEE7 984 aa26.25■■□□□ 1.79
MSLN-205ENST00000563941 TRMT2AQ8IZ69 625 aaKnown RBP26.23■■□□□ 1.79
MSLN-205ENST00000563941 GLI2P10070 1586 aa26.23■■□□□ 1.79
MSLN-205ENST00000563941 POLR3AO14802 1390 aaPredicted RBP26.23■■□□□ 1.79
MSLN-205ENST00000563941 MS4A1P11836 297 aa26.23■■□□□ 1.79
MSLN-205ENST00000563941 IPO9Q96P70 1041 aaKnown RBP26.23■■□□□ 1.79
MSLN-205ENST00000563941 NEXMIFQ5QGS0 1516 aa26.21■■□□□ 1.79
MSLN-205ENST00000563941 RICTORQ6R327 1708 aa26.21■■□□□ 1.79
MSLN-205ENST00000563941 SLC12A5Q9H2X9 1139 aa26.2■■□□□ 1.79
MSLN-205ENST00000563941 PAK3O75914 559 aaPredicted RBP26.2■■□□□ 1.78
MSLN-205ENST00000563941 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.2■■□□□ 1.78
MSLN-205ENST00000563941 RIMBP3CA6NJZ7 1639 aa26.19■■□□□ 1.78
MSLN-205ENST00000563941 RIMBP3BA6NNM3 1639 aa26.19■■□□□ 1.78
MSLN-205ENST00000563941 RIMBP3Q9UFD9 1639 aa26.19■■□□□ 1.78
MSLN-205ENST00000563941 NKTRP30414 1462 aaKnown RBP26.19■■□□□ 1.78
MSLN-205ENST00000563941 PDE4AP27815 886 aa26.19■■□□□ 1.78
MSLN-205ENST00000563941 USP32Q8NFA0 1604 aa26.19■■□□□ 1.78
MSLN-205ENST00000563941 ARHGEF28Q8N1W1 1705 aaKnown RBP26.19■■□□□ 1.78
MSLN-205ENST00000563941 SPINK5Q9NQ38 1064 aaPredicted RBP26.18■■□□□ 1.78
MSLN-205ENST00000563941 SHPRHQ149N8 1683 aa26.18■■□□□ 1.78
MSLN-205ENST00000563941 MORC1Q86VD1 984 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms