RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 SETBP1Q9Y6X0 1596 aa13.45□□□□□ -0.26
PDXDC1-210ENST00000563679 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
PDXDC1-210ENST00000563679 POLR3GLQ9BT43 218 aa13.45□□□□□ -0.26
PDXDC1-210ENST00000563679 CD109Q6YHK3 1445 aa13.45□□□□□ -0.26
PDXDC1-210ENST00000563679 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
PDXDC1-210ENST00000563679 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
PDXDC1-210ENST00000563679 PPLO60437 1756 aa13.43□□□□□ -0.26
PDXDC1-210ENST00000563679 KIF3BO15066 747 aa13.43□□□□□ -0.26
PDXDC1-210ENST00000563679 UGGT1Q9NYU2 1555 aa13.43□□□□□ -0.26
PDXDC1-210ENST00000563679 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
PDXDC1-210ENST00000563679 KDM5AP29375 1690 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-210ENST00000563679 PPP4R2Q9NY27 417 aa13.42□□□□□ -0.26
PDXDC1-210ENST00000563679 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
PDXDC1-210ENST00000563679 PIK3C2BO00750 1634 aa13.41□□□□□ -0.26
PDXDC1-210ENST00000563679 EIF3AQ14152 1382 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-210ENST00000563679 RICTORQ6R327 1708 aa13.41□□□□□ -0.26
PDXDC1-210ENST00000563679 ABCC3O15438 1527 aa13.41□□□□□ -0.26
PDXDC1-210ENST00000563679 ZC3H13Q5T200 1668 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-210ENST00000563679 GLI2P10070 1586 aa13.41□□□□□ -0.26
PDXDC1-210ENST00000563679 CAMSAP1Q5T5Y3 1602 aa13.4□□□□□ -0.26
PDXDC1-210ENST00000563679 DIP2CQ9Y2E4 1556 aa13.4□□□□□ -0.26
PDXDC1-210ENST00000563679 SBNO2Q9Y2G9 1366 aa13.4□□□□□ -0.26
PDXDC1-210ENST00000563679 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
PDXDC1-210ENST00000563679 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
PDXDC1-210ENST00000563679 NPATQ14207 1427 aa13.38□□□□□ -0.27
PDXDC1-210ENST00000563679 PANK3Q9H999 370 aa13.38□□□□□ -0.27
PDXDC1-210ENST00000563679 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
PDXDC1-210ENST00000563679 NOS1P29475 1434 aa13.37□□□□□ -0.27
PDXDC1-210ENST00000563679 SIGLEC1Q9BZZ2 1709 aa13.37□□□□□ -0.27
PDXDC1-210ENST00000563679 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
PDXDC1-210ENST00000563679 ARHGAP31Q2M1Z3 1444 aa13.36□□□□□ -0.27
PDXDC1-210ENST00000563679 ADGRB1O14514 1584 aa13.36□□□□□ -0.27
PDXDC1-210ENST00000563679 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
PDXDC1-210ENST00000563679 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
PDXDC1-210ENST00000563679 IRX6P78412 446 aaPredicted RBP13.33□□□□□ -0.28
PDXDC1-210ENST00000563679 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
PDXDC1-210ENST00000563679 RPGRIP1LQ68CZ1 1315 aa13.32□□□□□ -0.28
PDXDC1-210ENST00000563679 ADGRF5Q8IZF2 1346 aa13.32□□□□□ -0.28
PDXDC1-210ENST00000563679 ERICH6Q7L0X2 663 aa13.32□□□□□ -0.28
PDXDC1-210ENST00000563679 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
PDXDC1-210ENST00000563679 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
PDXDC1-210ENST00000563679 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
PDXDC1-210ENST00000563679 RBM19Q9Y4C8 960 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-210ENST00000563679 REREQ9P2R6 1566 aa13.3□□□□□ -0.28
PDXDC1-210ENST00000563679 ZFYVE9O95405 1425 aa13.29□□□□□ -0.28
PDXDC1-210ENST00000563679 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
PDXDC1-210ENST00000563679 CFAP70Q5T0N1 1121 aa13.29□□□□□ -0.28
PDXDC1-210ENST00000563679 CNGB1Q14028 1251 aaPredicted RBP13.28□□□□□ -0.28
PDXDC1-210ENST00000563679 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
PDXDC1-210ENST00000563679 PPP2R1AP30153 589 aa13.27□□□□□ -0.28
PDXDC1-210ENST00000563679 C14orf93Q9H972 538 aaKnown RBP13.27□□□□□ -0.28
PDXDC1-210ENST00000563679 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.28
PDXDC1-210ENST00000563679 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.29
PDXDC1-210ENST00000563679 PREX1Q8TCU6 1659 aa13.26□□□□□ -0.29
PDXDC1-210ENST00000563679 DIP2BQ9P265 1576 aa13.25□□□□□ -0.29
PDXDC1-210ENST00000563679 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
PDXDC1-210ENST00000563679 TMEM131LA2VDJ0 1609 aa13.24□□□□□ -0.29
PDXDC1-210ENST00000563679 CFAP65Q6ZU64 1925 aaKnown RBP13.24□□□□□ -0.29
PDXDC1-210ENST00000563679 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
PDXDC1-210ENST00000563679 RRP1P56182 461 aaKnown RBP13.23□□□□□ -0.29
PDXDC1-210ENST00000563679 AGLP35573 1532 aa13.23□□□□□ -0.29
PDXDC1-210ENST00000563679 ZNF521Q96K83 1311 aa13.23□□□□□ -0.29
PDXDC1-210ENST00000563679 CENPJQ9HC77 1338 aaPredicted RBP13.23□□□□□ -0.29
PDXDC1-210ENST00000563679 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
PDXDC1-210ENST00000563679 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
PDXDC1-210ENST00000563679 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
PDXDC1-210ENST00000563679 YEATS2Q9ULM3 1422 aa13.22□□□□□ -0.29
PDXDC1-210ENST00000563679 B4GALNT3Q6L9W6 998 aa13.22□□□□□ -0.29
PDXDC1-210ENST00000563679 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
PDXDC1-210ENST00000563679 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
PDXDC1-210ENST00000563679 RAPGEF3O95398 923 aa13.2□□□□□ -0.3
PDXDC1-210ENST00000563679 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
PDXDC1-210ENST00000563679 GGT6Q6P531 493 aa13.2□□□□□ -0.3
PDXDC1-210ENST00000563679 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
PDXDC1-210ENST00000563679 TULP4Q9NRJ4 1543 aa13.2□□□□□ -0.3
PDXDC1-210ENST00000563679 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
PDXDC1-210ENST00000563679 CLTCQ00610 1675 aaKnown RBP13.19□□□□□ -0.3
PDXDC1-210ENST00000563679 CARD14Q9BXL6 1004 aa13.19□□□□□ -0.3
PDXDC1-210ENST00000563679 POLR3AO14802 1390 aaPredicted RBP13.18□□□□□ -0.3
PDXDC1-210ENST00000563679 SLC52A1Q9NWF4 448 aa13.18□□□□□ -0.3
PDXDC1-210ENST00000563679 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
PDXDC1-210ENST00000563679 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
PDXDC1-210ENST00000563679 VGFO15240 615 aaPredicted RBP13.16□□□□□ -0.3
PDXDC1-210ENST00000563679 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
PDXDC1-210ENST00000563679 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDXDC1-210ENST00000563679 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.3
PDXDC1-210ENST00000563679 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
PDXDC1-210ENST00000563679 CCDC136Q96JN2 1154 aa13.14□□□□□ -0.31
PDXDC1-210ENST00000563679 SPATA31D1Q6ZQQ2 1576 aa13.14□□□□□ -0.31
PDXDC1-210ENST00000563679 NSD2O96028 1365 aa13.14□□□□□ -0.31
PDXDC1-210ENST00000563679 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
PDXDC1-210ENST00000563679 NSD3Q9BZ95 1437 aa13.14□□□□□ -0.31
PDXDC1-210ENST00000563679 PTPRMP28827 1452 aa13.14□□□□□ -0.31
PDXDC1-210ENST00000563679 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
PDXDC1-210ENST00000563679 ANP32EQ9BTT0 268 aa13.13□□□□□ -0.31
PDXDC1-210ENST00000563679 SETD1AO15047 1707 aaKnown RBP13.12□□□□□ -0.31
PDXDC1-210ENST00000563679 IDI1Q13907 227 aa13.12□□□□□ -0.31
PDXDC1-210ENST00000563679 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
PDXDC1-210ENST00000563679 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
PDXDC1-210ENST00000563679 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms