RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 SLC26A8Q96RN1 970 aa26.73■■□□□ 1.87
CMTM3-204ENST00000562357 ZFYVE9O95405 1425 aa26.73■■□□□ 1.87
CMTM3-204ENST00000562357 LRRC7Q96NW7 1537 aa26.71■■□□□ 1.87
CMTM3-204ENST00000562357 PLEKHG1Q9ULL1 1385 aa26.71■■□□□ 1.87
CMTM3-204ENST00000562357 SPHKAPQ2M3C7 1700 aa26.7■■□□□ 1.86
CMTM3-204ENST00000562357 PIP4K2BP78356 416 aa26.68■■□□□ 1.86
CMTM3-204ENST00000562357 STRCP1A6NGW2 1772 aa26.68■■□□□ 1.86
CMTM3-204ENST00000562357 MYO5BQ9ULV0 1848 aa26.67■■□□□ 1.86
CMTM3-204ENST00000562357 KCNA6P17658 529 aa26.67■■□□□ 1.86
CMTM3-204ENST00000562357 SLC4A1APQ9BWU0 796 aaKnown RBP26.67■■□□□ 1.86
CMTM3-204ENST00000562357 SENP3Q9H4L4 574 aaPredicted RBP26.66■■□□□ 1.86
CMTM3-204ENST00000562357 ZNF326Q5BKZ1 582 aaKnown RBP26.64■■□□□ 1.86
CMTM3-204ENST00000562357 TRPM2O94759 1503 aa26.63■■□□□ 1.85
CMTM3-204ENST00000562357 NUTM2DQ5VT03 806 aaPredicted RBP26.62■■□□□ 1.85
CMTM3-204ENST00000562357 PROSER2Q86WR7 435 aaPredicted RBP26.6■■□□□ 1.85
CMTM3-204ENST00000562357 ACIN1Q9UKV3 1341 aaKnown RBP26.6■■□□□ 1.85
CMTM3-204ENST00000562357 SOCS7O14512 581 aa26.59■■□□□ 1.85
CMTM3-204ENST00000562357 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
CMTM3-204ENST00000562357 NKTRP30414 1462 aaKnown RBP26.59■■□□□ 1.85
CMTM3-204ENST00000562357 TMEM94Q12767 1356 aa26.58■■□□□ 1.84
CMTM3-204ENST00000562357 NWD1Q149M9 1564 aa26.56■■□□□ 1.84
CMTM3-204ENST00000562357 CLTCL1P53675 1640 aa26.56■■□□□ 1.84
CMTM3-204ENST00000562357 DIP2AQ14689 1571 aa26.55■■□□□ 1.84
CMTM3-204ENST00000562357 ADAMTS13Q76LX8 1427 aa26.52■■□□□ 1.84
CMTM3-204ENST00000562357 PIK3R4Q99570 1358 aa26.52■■□□□ 1.84
CMTM3-204ENST00000562357 HSPA1LP34931 641 aa26.51■■□□□ 1.83
CMTM3-204ENST00000562357 SETD5Q9C0A6 1442 aa26.5■■□□□ 1.83
CMTM3-204ENST00000562357 KIF1BO60333 1816 aa26.49■■□□□ 1.83
CMTM3-204ENST00000562357 MPHOSPH9Q99550 1183 aa26.49■■□□□ 1.83
CMTM3-204ENST00000562357 MSH6P52701 1360 aa26.48■■□□□ 1.83
CMTM3-204ENST00000562357 ALKQ9UM73 1620 aa26.48■■□□□ 1.83
CMTM3-204ENST00000562357 DISP3Q9P2K9 1392 aa26.47■■□□□ 1.83
CMTM3-204ENST00000562357 RBM33Q96EV2 1170 aaKnown RBP26.47■■□□□ 1.83
CMTM3-204ENST00000562357 CHD2O14647 1828 aaKnown RBP26.46■■□□□ 1.83
CMTM3-204ENST00000562357 XIRP1Q702N8 1843 aaKnown RBP26.46■■□□□ 1.83
CMTM3-204ENST00000562357 FOXD1Q16676 465 aa26.45■■□□□ 1.82
CMTM3-204ENST00000562357 C14orf37Q86TY3 774 aa26.45■■□□□ 1.82
CMTM3-204ENST00000562357 CCDC144AA2RUR9 1427 aa26.45■■□□□ 1.82
CMTM3-204ENST00000562357 SETBP1Q9Y6X0 1596 aa26.45■■□□□ 1.82
CMTM3-204ENST00000562357 NEXMIFQ5QGS0 1516 aa26.44■■□□□ 1.82
CMTM3-204ENST00000562357 VGFO15240 615 aaPredicted RBP26.44■■□□□ 1.82
CMTM3-204ENST00000562357 RPGRIP1LQ68CZ1 1315 aa26.43■■□□□ 1.82
CMTM3-204ENST00000562357 AMOTL2Q9Y2J4 779 aa26.42■■□□□ 1.82
CMTM3-204ENST00000562357 NCOA3Q9Y6Q9 1424 aa26.41■■□□□ 1.82
CMTM3-204ENST00000562357 RAB3GAP2Q9H2M9 1393 aa26.4■■□□□ 1.82
CMTM3-204ENST00000562357 NRXN3Q9Y4C0 1643 aa26.37■■□□□ 1.81
CMTM3-204ENST00000562357 FAM135BQ49AJ0 1406 aa26.37■■□□□ 1.81
CMTM3-204ENST00000562357 PTPRUQ92729 1446 aa26.34■■□□□ 1.81
CMTM3-204ENST00000562357 METP08581 1390 aa26.33■■□□□ 1.81
CMTM3-204ENST00000562357 ATF3P18847 181 aa26.32■■□□□ 1.8
CMTM3-204ENST00000562357 CADPS2Q86UW7 1296 aa26.32■■□□□ 1.8
CMTM3-204ENST00000562357 C19orf44Q9H6X5 657 aa26.32■■□□□ 1.8
CMTM3-204ENST00000562357 SLAIN2Q9P270 581 aa26.32■■□□□ 1.8
CMTM3-204ENST00000562357 RGL3Q3MIN7 710 aa26.31■■□□□ 1.8
CMTM3-204ENST00000562357 ILDR2Q71H61 639 aa26.31■■□□□ 1.8
CMTM3-204ENST00000562357 XRN1Q8IZH2 1706 aaKnown RBP26.28■■□□□ 1.8
CMTM3-204ENST00000562357 ANKRD30BQ9BXX2 1392 aa26.28■■□□□ 1.8
CMTM3-204ENST00000562357 SPATA31E1Q6ZUB1 1445 aa26.27■■□□□ 1.8
CMTM3-204ENST00000562357 ROBO1Q9Y6N7 1651 aa26.27■■□□□ 1.8
CMTM3-204ENST00000562357 PPLO60437 1756 aa26.26■■□□□ 1.79
CMTM3-204ENST00000562357 HRCP23327 699 aa26.24■■□□□ 1.79
CMTM3-204ENST00000562357 DCCP43146 1447 aa26.23■■□□□ 1.79
CMTM3-204ENST00000562357 MED1Q15648 1581 aaPredicted RBP26.23■■□□□ 1.79
CMTM3-204ENST00000562357 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.22■■□□□ 1.79
CMTM3-204ENST00000562357 ADGRF5Q8IZF2 1346 aa26.2■■□□□ 1.79
CMTM3-204ENST00000562357 PHF23Q9BUL5 403 aaPredicted RBP26.2■■□□□ 1.78
CMTM3-204ENST00000562357 PTCH1Q13635 1447 aa26.2■■□□□ 1.78
CMTM3-204ENST00000562357 ADGRL3Q9HAR2 1447 aa26.18■■□□□ 1.78
CMTM3-204ENST00000562357 SETD1AO15047 1707 aaKnown RBP26.16■■□□□ 1.78
CMTM3-204ENST00000562357 PRAG1Q86YV5 1406 aa26.14■■□□□ 1.77
CMTM3-204ENST00000562357 IFT172Q9UG01 1749 aa26.13■■□□□ 1.77
CMTM3-204ENST00000562357 ROBO2Q9HCK4 1378 aa26.12■■□□□ 1.77
CMTM3-204ENST00000562357 PIK3C2GO75747 1445 aa26.12■■□□□ 1.77
CMTM3-204ENST00000562357 PHLPP1O60346 1717 aa26.11■■□□□ 1.77
CMTM3-204ENST00000562357 MST1RQ04912 1400 aa26.09■■□□□ 1.77
CMTM3-204ENST00000562357 MYOM2P54296 1465 aa26.09■■□□□ 1.77
CMTM3-204ENST00000562357 JCADQ9P266 1359 aa26.08■■□□□ 1.77
CMTM3-204ENST00000562357 BRINP3Q76B58 766 aa26.08■■□□□ 1.77
CMTM3-204ENST00000562357 STK26Q9P289 416 aa26.08■■□□□ 1.77
CMTM3-204ENST00000562357 NALCNQ8IZF0 1738 aa26.07■■□□□ 1.76
CMTM3-204ENST00000562357 LRPPRCP42704 1394 aaKnown RBP26.07■■□□□ 1.76
CMTM3-204ENST00000562357 AHDC1Q5TGY3 1603 aaPredicted RBP26.05■■□□□ 1.76
CMTM3-204ENST00000562357 ASXL1Q8IXJ9 1541 aa26.04■■□□□ 1.76
CMTM3-204ENST00000562357 TMEM132EQ6IEE7 984 aa26.04■■□□□ 1.76
CMTM3-204ENST00000562357 C14orf93Q9H972 538 aaKnown RBP26.03■■□□□ 1.76
CMTM3-204ENST00000562357 ABCC11Q96J66 1382 aa26.03■■□□□ 1.76
CMTM3-204ENST00000562357 TECPR2O15040 1411 aa26.03■■□□□ 1.76
CMTM3-204ENST00000562357 COL16A1Q07092 1604 aaPredicted RBP26.03■■□□□ 1.76
CMTM3-204ENST00000562357 NRXN1Q9ULB1 1477 aa26.02■■□□□ 1.76
CMTM3-204ENST00000562357 LAMC1P11047 1609 aa26.01■■□□□ 1.75
CMTM3-204ENST00000562357 YTHDC2Q9H6S0 1430 aaKnown RBP26■■□□□ 1.75
CMTM3-204ENST00000562357 DHX57Q6P158 1386 aaKnown RBP26■■□□□ 1.75
CMTM3-204ENST00000562357 STAC3Q96MF2 364 aa26■■□□□ 1.75
CMTM3-204ENST00000562357 CFAP70Q5T0N1 1121 aa25.99■■□□□ 1.75
CMTM3-204ENST00000562357 C1orf167Q5SNV9 1468 aa25.98■■□□□ 1.75
CMTM3-204ENST00000562357 SPATA31A6Q5VVP1 1343 aa25.98■■□□□ 1.75
CMTM3-204ENST00000562357 DCAF11Q8TEB1 546 aa25.98■■□□□ 1.75
CMTM3-204ENST00000562357 KDM2AQ9Y2K7 1162 aa25.97■■□□□ 1.75
CMTM3-204ENST00000562357 WAPLQ7Z5K2 1190 aa25.96■■□□□ 1.75
CMTM3-204ENST00000562357 KNDC1Q76NI1 1749 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms