RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 TXNDC2Q86VQ3 553 aa32.72■■■□□ 2.83
SYNGR3-202ENST00000562045 RIMS2Q9UQ26 1411 aa32.71■■■□□ 2.83
SYNGR3-202ENST00000562045 NUTM2DQ5VT03 806 aaPredicted RBP32.7■■■□□ 2.83
SYNGR3-202ENST00000562045 MED14O60244 1454 aa32.68■■■□□ 2.82
SYNGR3-202ENST00000562045 SPATA31E1Q6ZUB1 1445 aa32.68■■■□□ 2.82
SYNGR3-202ENST00000562045 IQGAP1P46940 1657 aa32.67■■■□□ 2.82
SYNGR3-202ENST00000562045 ZNF326Q5BKZ1 582 aaKnown RBP32.67■■■□□ 2.82
SYNGR3-202ENST00000562045 SENP3Q9H4L4 574 aaPredicted RBP32.66■■■□□ 2.82
SYNGR3-202ENST00000562045 NEXMIFQ5QGS0 1516 aa32.66■■■□□ 2.82
SYNGR3-202ENST00000562045 NPHP4O75161 1426 aaPredicted RBP32.66■■■□□ 2.82
SYNGR3-202ENST00000562045 EID1Q9Y6B2 187 aa32.65■■■□□ 2.82
SYNGR3-202ENST00000562045 DMRT2Q9Y5R5 561 aa32.62■■■□□ 2.81
SYNGR3-202ENST00000562045 RGL3Q3MIN7 710 aa32.61■■■□□ 2.81
SYNGR3-202ENST00000562045 PPLO60437 1756 aa32.6■■■□□ 2.81
SYNGR3-202ENST00000562045 IFT172Q9UG01 1749 aa32.57■■■□□ 2.8
SYNGR3-202ENST00000562045 PPP1R15AO75807 674 aaPredicted RBP32.56■■■□□ 2.8
SYNGR3-202ENST00000562045 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.54■■■□□ 2.8
SYNGR3-202ENST00000562045 PLEKHG1Q9ULL1 1385 aa32.53■■■□□ 2.8
SYNGR3-202ENST00000562045 SIN3AQ96ST3 1273 aa32.53■■■□□ 2.8
SYNGR3-202ENST00000562045 HDGFP51858 240 aaKnown RBP32.51■■■□□ 2.8
SYNGR3-202ENST00000562045 NRXN3Q9Y4C0 1643 aa32.51■■■□□ 2.8
SYNGR3-202ENST00000562045 SLC26A8Q96RN1 970 aa32.51■■■□□ 2.79
SYNGR3-202ENST00000562045 RPGRIP1LQ68CZ1 1315 aa32.49■■■□□ 2.79
SYNGR3-202ENST00000562045 ZNF335Q9H4Z2 1342 aaPredicted RBP32.48■■■□□ 2.79
SYNGR3-202ENST00000562045 BCANQ96GW7 911 aa32.47■■■□□ 2.79
SYNGR3-202ENST00000562045 ADAMTS13Q76LX8 1427 aa32.46■■■□□ 2.79
SYNGR3-202ENST00000562045 STRCP1A6NGW2 1772 aa32.45■■■□□ 2.79
SYNGR3-202ENST00000562045 ADGRF5Q8IZF2 1346 aa32.44■■■□□ 2.78
SYNGR3-202ENST00000562045 SETBP1Q9Y6X0 1596 aa32.44■■■□□ 2.78
SYNGR3-202ENST00000562045 NEUROD1Q13562 356 aa32.42■■■□□ 2.78
SYNGR3-202ENST00000562045 LTBP4Q8N2S1 1624 aa32.41■■■□□ 2.78
SYNGR3-202ENST00000562045 VGFO15240 615 aaPredicted RBP32.41■■■□□ 2.78
SYNGR3-202ENST00000562045 TIMELESSQ9UNS1 1208 aa32.38■■■□□ 2.77
SYNGR3-202ENST00000562045 SETD1AO15047 1707 aaKnown RBP32.37■■■□□ 2.77
SYNGR3-202ENST00000562045 DCAF11Q8TEB1 546 aa32.36■■■□□ 2.77
SYNGR3-202ENST00000562045 MYOM2P54296 1465 aa32.35■■■□□ 2.77
SYNGR3-202ENST00000562045 DIP2AQ14689 1571 aa32.35■■■□□ 2.77
SYNGR3-202ENST00000562045 TBX22Q9Y458 520 aa32.34■■■□□ 2.77
SYNGR3-202ENST00000562045 KDM2AQ9Y2K7 1162 aa32.34■■■□□ 2.77
SYNGR3-202ENST00000562045 NRXN1Q9ULB1 1477 aa32.34■■■□□ 2.77
SYNGR3-202ENST00000562045 ALKQ9UM73 1620 aa32.33■■■□□ 2.77
SYNGR3-202ENST00000562045 CHD2O14647 1828 aaKnown RBP32.33■■■□□ 2.77
SYNGR3-202ENST00000562045 PIK3C2GO75747 1445 aa32.32■■■□□ 2.76
SYNGR3-202ENST00000562045 METP08581 1390 aa32.31■■■□□ 2.76
SYNGR3-202ENST00000562045 TONSLQ96HA7 1378 aa32.29■■■□□ 2.76
SYNGR3-202ENST00000562045 PTPRUQ92729 1446 aa32.29■■■□□ 2.76
SYNGR3-202ENST00000562045 L3MBTL2Q969R5 705 aa32.28■■■□□ 2.76
SYNGR3-202ENST00000562045 NWD1Q149M9 1564 aa32.27■■■□□ 2.76
SYNGR3-202ENST00000562045 KCNA6P17658 529 aa32.24■■■□□ 2.75
SYNGR3-202ENST00000562045 ASXL1Q8IXJ9 1541 aa32.23■■■□□ 2.75
SYNGR3-202ENST00000562045 CPS1P31327 1500 aa32.22■■■□□ 2.75
SYNGR3-202ENST00000562045 CFAP70Q5T0N1 1121 aa32.2■■■□□ 2.75
SYNGR3-202ENST00000562045 XIRP1Q702N8 1843 aaKnown RBP32.2■■■□□ 2.75
SYNGR3-202ENST00000562045 XRN1Q8IZH2 1706 aaKnown RBP32.2■■■□□ 2.75
SYNGR3-202ENST00000562045 PIK3R4Q99570 1358 aa32.2■■■□□ 2.75
SYNGR3-202ENST00000562045 LRRC7Q96NW7 1537 aa32.2■■■□□ 2.74
SYNGR3-202ENST00000562045 CERKQ8TCT0 537 aa32.19■■■□□ 2.74
SYNGR3-202ENST00000562045 RBM33Q96EV2 1170 aaKnown RBP32.17■■■□□ 2.74
SYNGR3-202ENST00000562045 C14orf93Q9H972 538 aaKnown RBP32.17■■■□□ 2.74
SYNGR3-202ENST00000562045 AMOTL2Q9Y2J4 779 aa32.17■■■□□ 2.74
SYNGR3-202ENST00000562045 TMEM132EQ6IEE7 984 aa32.17■■■□□ 2.74
SYNGR3-202ENST00000562045 LAMC1P11047 1609 aa32.16■■■□□ 2.74
SYNGR3-202ENST00000562045 PRAG1Q86YV5 1406 aa32.15■■■□□ 2.74
SYNGR3-202ENST00000562045 STAC3Q96MF2 364 aa32.14■■■□□ 2.74
SYNGR3-202ENST00000562045 NKTRP30414 1462 aaKnown RBP32.13■■■□□ 2.73
SYNGR3-202ENST00000562045 ADGRB1O14514 1584 aa32.1■■■□□ 2.73
SYNGR3-202ENST00000562045 PROSER2Q86WR7 435 aaPredicted RBP32.08■■■□□ 2.73
SYNGR3-202ENST00000562045 TMEM94Q12767 1356 aa32.08■■■□□ 2.73
SYNGR3-202ENST00000562045 STK26Q9P289 416 aa32.06■■■□□ 2.72
SYNGR3-202ENST00000562045 KIAA1210Q9ULL0 1709 aa32.05■■■□□ 2.72
SYNGR3-202ENST00000562045 NBPF8Q3BBV2 869 aa32.05■■■□□ 2.72
SYNGR3-202ENST00000562045 YTHDC2Q9H6S0 1430 aaKnown RBP32.04■■■□□ 2.72
SYNGR3-202ENST00000562045 ROBO2Q9HCK4 1378 aa32.04■■■□□ 2.72
SYNGR3-202ENST00000562045 LRPPRCP42704 1394 aaKnown RBP32.03■■■□□ 2.72
SYNGR3-202ENST00000562045 NBPF1Q3BBV0 1214 aa32.03■■■□□ 2.72
SYNGR3-202ENST00000562045 KNDC1Q76NI1 1749 aa32.02■■■□□ 2.72
SYNGR3-202ENST00000562045 TRPM1Q7Z4N2 1603 aa32.02■■■□□ 2.72
SYNGR3-202ENST00000562045 IQSEC2Q5JU85 1478 aa32.02■■■□□ 2.72
SYNGR3-202ENST00000562045 PTCH1Q13635 1447 aa31.99■■■□□ 2.71
SYNGR3-202ENST00000562045 TECPR2O15040 1411 aa31.98■■■□□ 2.71
SYNGR3-202ENST00000562045 ABCC11Q96J66 1382 aa31.97■■■□□ 2.71
SYNGR3-202ENST00000562045 PLEKHH1Q9ULM0 1364 aa31.95■■■□□ 2.7
SYNGR3-202ENST00000562045 NALCNQ8IZF0 1738 aa31.94■■■□□ 2.7
SYNGR3-202ENST00000562045 WAPLQ7Z5K2 1190 aa31.94■■■□□ 2.7
SYNGR3-202ENST00000562045 TRAK1Q9UPV9 953 aa31.92■■■□□ 2.7
SYNGR3-202ENST00000562045 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.92■■■□□ 2.7
SYNGR3-202ENST00000562045 ARHGEF28Q8N1W1 1705 aaKnown RBP31.89■■■□□ 2.7
SYNGR3-202ENST00000562045 NCOA3Q9Y6Q9 1424 aa31.89■■■□□ 2.7
SYNGR3-202ENST00000562045 DLC1Q96QB1 1528 aa31.88■■■□□ 2.69
SYNGR3-202ENST00000562045 C14orf37Q86TY3 774 aa31.88■■■□□ 2.69
SYNGR3-202ENST00000562045 UBAP1LF5GYI3 381 aa31.86■■■□□ 2.69
SYNGR3-202ENST00000562045 FAM135BQ49AJ0 1406 aa31.85■■■□□ 2.69
SYNGR3-202ENST00000562045 MSH6P52701 1360 aa31.85■■■□□ 2.69
SYNGR3-202ENST00000562045 ADGRL3Q9HAR2 1447 aa31.84■■■□□ 2.69
SYNGR3-202ENST00000562045 ROCK2O75116 1388 aaKnown RBP31.84■■■□□ 2.69
SYNGR3-202ENST00000562045 PRAM1Q96QH2 718 aa31.84■■■□□ 2.69
SYNGR3-202ENST00000562045 RALGAPBQ86X10 1494 aa31.84■■■□□ 2.69
SYNGR3-202ENST00000562045 SAFB2Q14151 953 aaKnown RBP eCLIP31.83■■■□□ 2.69
SYNGR3-202ENST00000562045 SIRT1Q96EB6 747 aa31.82■■■□□ 2.68
SYNGR3-202ENST00000562045 C19orf44Q9H6X5 657 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms