RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 GGT6Q6P531 493 aa17.38■□□□□ 0.37
AC055717.2-201ENST00000561864 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
AC055717.2-201ENST00000561864 SYNMO15061 1565 aa17.37■□□□□ 0.37
AC055717.2-201ENST00000561864 SETBP1Q9Y6X0 1596 aa17.37■□□□□ 0.37
AC055717.2-201ENST00000561864 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
AC055717.2-201ENST00000561864 TESK2Q96S53 571 aa17.36■□□□□ 0.37
AC055717.2-201ENST00000561864 TMF1P82094 1093 aa17.34■□□□□ 0.37
AC055717.2-201ENST00000561864 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
AC055717.2-201ENST00000561864 MYO3AQ8NEV4 1616 aa17.34■□□□□ 0.37
AC055717.2-201ENST00000561864 DISP3Q9P2K9 1392 aa17.34■□□□□ 0.37
AC055717.2-201ENST00000561864 PREX1Q8TCU6 1659 aa17.33■□□□□ 0.37
AC055717.2-201ENST00000561864 ARHGEF40Q8TER5 1519 aa17.33■□□□□ 0.37
AC055717.2-201ENST00000561864 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
AC055717.2-201ENST00000561864 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
AC055717.2-201ENST00000561864 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
AC055717.2-201ENST00000561864 RALBP1Q15311 655 aa17.29■□□□□ 0.36
AC055717.2-201ENST00000561864 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
AC055717.2-201ENST00000561864 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
AC055717.2-201ENST00000561864 NEXMIFQ5QGS0 1516 aa17.29■□□□□ 0.36
AC055717.2-201ENST00000561864 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
AC055717.2-201ENST00000561864 ADGRF5Q8IZF2 1346 aa17.27■□□□□ 0.36
AC055717.2-201ENST00000561864 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
AC055717.2-201ENST00000561864 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
AC055717.2-201ENST00000561864 BRD4O60885 1362 aaPredicted RBP17.26■□□□□ 0.35
AC055717.2-201ENST00000561864 SBNO2Q9Y2G9 1366 aa17.26■□□□□ 0.35
AC055717.2-201ENST00000561864 MYBBP1AQ9BQG0 1328 aaKnown RBP17.25■□□□□ 0.35
AC055717.2-201ENST00000561864 ADGRB1O14514 1584 aa17.25■□□□□ 0.35
AC055717.2-201ENST00000561864 ZFYVE9O95405 1425 aa17.25■□□□□ 0.35
AC055717.2-201ENST00000561864 SLC52A1Q9NWF4 448 aa17.25■□□□□ 0.35
AC055717.2-201ENST00000561864 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
AC055717.2-201ENST00000561864 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
AC055717.2-201ENST00000561864 MYOM1P52179 1685 aa17.24■□□□□ 0.35
AC055717.2-201ENST00000561864 CFAP65Q6ZU64 1925 aaKnown RBP17.24■□□□□ 0.35
AC055717.2-201ENST00000561864 TMEM131LA2VDJ0 1609 aa17.24■□□□□ 0.35
AC055717.2-201ENST00000561864 CHGAP10645 457 aaKnown RBP17.23■□□□□ 0.35
AC055717.2-201ENST00000561864 CFAP70Q5T0N1 1121 aa17.23■□□□□ 0.35
AC055717.2-201ENST00000561864 CLTCQ00610 1675 aaKnown RBP17.23■□□□□ 0.35
AC055717.2-201ENST00000561864 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.35
AC055717.2-201ENST00000561864 SPATA31D1Q6ZQQ2 1576 aa17.2■□□□□ 0.34
AC055717.2-201ENST00000561864 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
AC055717.2-201ENST00000561864 ZBED9Q6R2W3 1325 aa17.2■□□□□ 0.34
AC055717.2-201ENST00000561864 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
AC055717.2-201ENST00000561864 FAM9BQ8IZU0 186 aa17.19■□□□□ 0.34
AC055717.2-201ENST00000561864 VGFO15240 615 aaPredicted RBP17.18■□□□□ 0.34
AC055717.2-201ENST00000561864 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
AC055717.2-201ENST00000561864 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
AC055717.2-201ENST00000561864 PANK3Q9H999 370 aa17.17■□□□□ 0.34
AC055717.2-201ENST00000561864 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
AC055717.2-201ENST00000561864 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
AC055717.2-201ENST00000561864 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
AC055717.2-201ENST00000561864 ASXL1Q8IXJ9 1541 aa17.16■□□□□ 0.34
AC055717.2-201ENST00000561864 ARHGEF28Q8N1W1 1705 aaKnown RBP17.16■□□□□ 0.34
AC055717.2-201ENST00000561864 IDI1Q13907 227 aa17.15■□□□□ 0.34
AC055717.2-201ENST00000561864 CENPJQ9HC77 1338 aaPredicted RBP17.15■□□□□ 0.34
AC055717.2-201ENST00000561864 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
AC055717.2-201ENST00000561864 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
AC055717.2-201ENST00000561864 INSRP06213 1382 aa17.14■□□□□ 0.33
AC055717.2-201ENST00000561864 NEFLP07196 543 aa17.13■□□□□ 0.33
AC055717.2-201ENST00000561864 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
AC055717.2-201ENST00000561864 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
AC055717.2-201ENST00000561864 A2ML1A8K2U0 1454 aa17.07■□□□□ 0.32
AC055717.2-201ENST00000561864 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
AC055717.2-201ENST00000561864 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
AC055717.2-201ENST00000561864 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
AC055717.2-201ENST00000561864 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
AC055717.2-201ENST00000561864 FBXO31Q5XUX0 539 aaPredicted RBP17.06■□□□□ 0.32
AC055717.2-201ENST00000561864 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
AC055717.2-201ENST00000561864 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
AC055717.2-201ENST00000561864 ALKQ9UM73 1620 aa17.04■□□□□ 0.32
AC055717.2-201ENST00000561864 TULP4Q9NRJ4 1543 aa17.04■□□□□ 0.32
AC055717.2-201ENST00000561864 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
AC055717.2-201ENST00000561864 FKBP8Q14318 412 aa17.03■□□□□ 0.32
AC055717.2-201ENST00000561864 DLC1Q96QB1 1528 aa17.02■□□□□ 0.32
AC055717.2-201ENST00000561864 SETD1AO15047 1707 aaKnown RBP17.02■□□□□ 0.32
AC055717.2-201ENST00000561864 PTPRMP28827 1452 aa17.02■□□□□ 0.32
AC055717.2-201ENST00000561864 TMEM132EQ6IEE7 984 aa17.02■□□□□ 0.32
AC055717.2-201ENST00000561864 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
AC055717.2-201ENST00000561864 ESF1Q9H501 851 aaKnown RBP17.02■□□□□ 0.32
AC055717.2-201ENST00000561864 RIMS2Q9UQ26 1411 aa17.02■□□□□ 0.31
AC055717.2-201ENST00000561864 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
AC055717.2-201ENST00000561864 ZMYM3Q14202 1370 aa17.01■□□□□ 0.31
AC055717.2-201ENST00000561864 EVC2Q86UK5 1308 aa17■□□□□ 0.31
AC055717.2-201ENST00000561864 YTHDC2Q9H6S0 1430 aaKnown RBP17■□□□□ 0.31
AC055717.2-201ENST00000561864 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
AC055717.2-201ENST00000561864 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
AC055717.2-201ENST00000561864 MLECQ14165 292 aa16.99■□□□□ 0.31
AC055717.2-201ENST00000561864 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
AC055717.2-201ENST00000561864 ERICH6BQ5W0A0 696 aa16.98■□□□□ 0.31
AC055717.2-201ENST00000561864 TNRQ92752 1358 aa16.98■□□□□ 0.31
AC055717.2-201ENST00000561864 NUDCQ9Y266 331 aa16.97■□□□□ 0.31
AC055717.2-201ENST00000561864 NRXN3Q9Y4C0 1643 aa16.96■□□□□ 0.31
AC055717.2-201ENST00000561864 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
AC055717.2-201ENST00000561864 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.3
AC055717.2-201ENST00000561864 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.3
AC055717.2-201ENST00000561864 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
AC055717.2-201ENST00000561864 KDM4FA0A1W2PPD8 638 aa16.94■□□□□ 0.3
AC055717.2-201ENST00000561864 NLRP1Q9C000 1473 aa16.93■□□□□ 0.3
AC055717.2-201ENST00000561864 NSD2O96028 1365 aa16.93■□□□□ 0.3
AC055717.2-201ENST00000561864 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
AC055717.2-201ENST00000561864 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms