RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.27
HERC1-214ENST00000561400 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
HERC1-214ENST00000561400 THEMISQ8N1K5 641 aaPredicted RBP16.76■□□□□ 0.27
HERC1-214ENST00000561400 PPLO60437 1756 aa16.76■□□□□ 0.27
HERC1-214ENST00000561400 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
HERC1-214ENST00000561400 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
HERC1-214ENST00000561400 TONSLQ96HA7 1378 aa16.75■□□□□ 0.27
HERC1-214ENST00000561400 TMEM2Q9UHN6 1383 aa16.74■□□□□ 0.27
HERC1-214ENST00000561400 SLIT1O75093 1534 aa16.73■□□□□ 0.27
HERC1-214ENST00000561400 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
HERC1-214ENST00000561400 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
HERC1-214ENST00000561400 NUTM2DQ5VT03 806 aaPredicted RBP16.73■□□□□ 0.27
HERC1-214ENST00000561400 DCAF11Q8TEB1 546 aa16.73■□□□□ 0.27
HERC1-214ENST00000561400 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
HERC1-214ENST00000561400 HSPA2P54652 639 aa16.72■□□□□ 0.27
HERC1-214ENST00000561400 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
HERC1-214ENST00000561400 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
HERC1-214ENST00000561400 LTKP29376 864 aa16.7■□□□□ 0.26
HERC1-214ENST00000561400 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
HERC1-214ENST00000561400 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
HERC1-214ENST00000561400 TXNDC2Q86VQ3 553 aa16.68■□□□□ 0.26
HERC1-214ENST00000561400 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
HERC1-214ENST00000561400 MYOM2P54296 1465 aa16.67■□□□□ 0.26
HERC1-214ENST00000561400 POLR1AO95602 1720 aaPredicted RBP16.67■□□□□ 0.26
HERC1-214ENST00000561400 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
HERC1-214ENST00000561400 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.66■□□□□ 0.26
HERC1-214ENST00000561400 SCAF11Q99590 1463 aaKnown RBP16.66■□□□□ 0.26
HERC1-214ENST00000561400 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
HERC1-214ENST00000561400 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
HERC1-214ENST00000561400 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
HERC1-214ENST00000561400 ANKLE2Q86XL3 938 aa16.65■□□□□ 0.26
HERC1-214ENST00000561400 STRCQ7RTU9 1775 aa16.65■□□□□ 0.26
HERC1-214ENST00000561400 NRXN1Q9ULB1 1477 aa16.65■□□□□ 0.26
HERC1-214ENST00000561400 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
HERC1-214ENST00000561400 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
HERC1-214ENST00000561400 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
HERC1-214ENST00000561400 PRAG1Q86YV5 1406 aa16.63■□□□□ 0.25
HERC1-214ENST00000561400 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
HERC1-214ENST00000561400 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
HERC1-214ENST00000561400 NRXN3Q9Y4C0 1643 aa16.62■□□□□ 0.25
HERC1-214ENST00000561400 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
HERC1-214ENST00000561400 PLEKHG1Q9ULL1 1385 aa16.61■□□□□ 0.25
HERC1-214ENST00000561400 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
HERC1-214ENST00000561400 MED14O60244 1454 aa16.6■□□□□ 0.25
HERC1-214ENST00000561400 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
HERC1-214ENST00000561400 SETD1AO15047 1707 aaKnown RBP16.58■□□□□ 0.25
HERC1-214ENST00000561400 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.25
HERC1-214ENST00000561400 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.24
HERC1-214ENST00000561400 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.24
HERC1-214ENST00000561400 ALKQ9UM73 1620 aa16.58■□□□□ 0.24
HERC1-214ENST00000561400 ADAMTS13Q76LX8 1427 aa16.58■□□□□ 0.24
HERC1-214ENST00000561400 ZEB1P37275 1124 aaPredicted RBP16.57■□□□□ 0.24
HERC1-214ENST00000561400 BCANQ96GW7 911 aa16.57■□□□□ 0.24
HERC1-214ENST00000561400 SLC26A8Q96RN1 970 aa16.57■□□□□ 0.24
HERC1-214ENST00000561400 C14orf93Q9H972 538 aaKnown RBP16.57■□□□□ 0.24
HERC1-214ENST00000561400 KIAA1210Q9ULL0 1709 aa16.56■□□□□ 0.24
HERC1-214ENST00000561400 LAMC1P11047 1609 aa16.55■□□□□ 0.24
HERC1-214ENST00000561400 NBPF1Q3BBV0 1214 aa16.55■□□□□ 0.24
HERC1-214ENST00000561400 ASXL1Q8IXJ9 1541 aa16.53■□□□□ 0.24
HERC1-214ENST00000561400 RALGAPBQ86X10 1494 aa16.53■□□□□ 0.24
HERC1-214ENST00000561400 TMEM132EQ6IEE7 984 aa16.52■□□□□ 0.24
HERC1-214ENST00000561400 TBX22Q9Y458 520 aa16.52■□□□□ 0.24
HERC1-214ENST00000561400 METP08581 1390 aa16.52■□□□□ 0.24
HERC1-214ENST00000561400 DIP2AQ14689 1571 aa16.52■□□□□ 0.23
HERC1-214ENST00000561400 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
HERC1-214ENST00000561400 UBE2Q2Q8WVN8 375 aa16.5■□□□□ 0.23
HERC1-214ENST00000561400 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
HERC1-214ENST00000561400 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
HERC1-214ENST00000561400 CHD2O14647 1828 aaKnown RBP16.49■□□□□ 0.23
HERC1-214ENST00000561400 GPRASP1Q5JY77 1395 aa16.48■□□□□ 0.23
HERC1-214ENST00000561400 PTPRUQ92729 1446 aa16.47■□□□□ 0.23
HERC1-214ENST00000561400 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
HERC1-214ENST00000561400 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
HERC1-214ENST00000561400 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
HERC1-214ENST00000561400 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
HERC1-214ENST00000561400 PIK3R4Q99570 1358 aa16.45■□□□□ 0.22
HERC1-214ENST00000561400 STK26Q9P289 416 aa16.45■□□□□ 0.22
HERC1-214ENST00000561400 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
HERC1-214ENST00000561400 XRN1Q8IZH2 1706 aaKnown RBP16.43■□□□□ 0.22
HERC1-214ENST00000561400 LRPPRCP42704 1394 aaKnown RBP16.43■□□□□ 0.22
HERC1-214ENST00000561400 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
HERC1-214ENST00000561400 AMOTL2Q9Y2J4 779 aa16.43■□□□□ 0.22
HERC1-214ENST00000561400 KNDC1Q76NI1 1749 aa16.42■□□□□ 0.22
HERC1-214ENST00000561400 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
HERC1-214ENST00000561400 ABCC11Q96J66 1382 aa16.41■□□□□ 0.22
HERC1-214ENST00000561400 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
HERC1-214ENST00000561400 KCNA6P17658 529 aa16.41■□□□□ 0.22
HERC1-214ENST00000561400 ZNF335Q9H4Z2 1342 aaPredicted RBP16.4■□□□□ 0.22
HERC1-214ENST00000561400 TECPR2O15040 1411 aa16.4■□□□□ 0.22
HERC1-214ENST00000561400 CPS1P31327 1500 aa16.39■□□□□ 0.21
HERC1-214ENST00000561400 USP47Q96K76 1375 aa16.38■□□□□ 0.21
HERC1-214ENST00000561400 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
HERC1-214ENST00000561400 DLC1Q96QB1 1528 aa16.38■□□□□ 0.21
HERC1-214ENST00000561400 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
HERC1-214ENST00000561400 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
HERC1-214ENST00000561400 PLEKHH1Q9ULM0 1364 aa16.36■□□□□ 0.21
HERC1-214ENST00000561400 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
HERC1-214ENST00000561400 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.214e-7■■■■■ 27
HERC1-214ENST00000561400 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
HERC1-214ENST00000561400 FAM135BQ49AJ0 1406 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms