RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 PIK3C2GO75747 1445 aa8.19□□□□□ -1.1
ZEB1-219ENST00000560721 AKAP12Q02952 1782 aa8.18□□□□□ -1.1
ZEB1-219ENST00000560721 XIRP1Q702N8 1843 aaKnown RBP8.18□□□□□ -1.1
ZEB1-219ENST00000560721 DCCP43146 1447 aa8.17□□□□□ -1.1
ZEB1-219ENST00000560721 TSPY4P0CV99 314 aa8.17□□□□□ -1.1
ZEB1-219ENST00000560721 TSPY10P0CW01 314 aa8.17□□□□□ -1.1
ZEB1-219ENST00000560721 FAM135BQ49AJ0 1406 aa8.17□□□□□ -1.1
ZEB1-219ENST00000560721 FMN2Q9NZ56 1722 aa8.17□□□□□ -1.1
ZEB1-219ENST00000560721 NRKQ7Z2Y5 1582 aa8.16□□□□□ -1.1
ZEB1-219ENST00000560721 BRD4O60885 1362 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-219ENST00000560721 PLEKHG2Q9H7P9 1386 aa8.16□□□□□ -1.1
ZEB1-219ENST00000560721 SLC52A1Q9NWF4 448 aa8.16□□□□□ -1.1
ZEB1-219ENST00000560721 PLEKHG1Q9ULL1 1385 aa8.15□□□□□ -1.1
ZEB1-219ENST00000560721 CRYBG1Q9Y4K1 1723 aa8.15□□□□□ -1.1
ZEB1-219ENST00000560721 COL22A1Q8NFW1 1626 aaPredicted RBP8.15□□□□□ -1.11
ZEB1-219ENST00000560721 NUP155O75694 1391 aa8.15□□□□□ -1.11
ZEB1-219ENST00000560721 ASXL1Q8IXJ9 1541 aa8.14□□□□□ -1.11
ZEB1-219ENST00000560721 MON2Q7Z3U7 1717 aa8.14□□□□□ -1.11
ZEB1-219ENST00000560721 ARID4BQ4LE39 1312 aaPredicted RBP8.14□□□□□ -1.11
ZEB1-219ENST00000560721 MED1Q15648 1581 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-219ENST00000560721 NALCNQ8IZF0 1738 aa8.13□□□□□ -1.11
ZEB1-219ENST00000560721 MYOM1P52179 1685 aa8.13□□□□□ -1.11
ZEB1-219ENST00000560721 P3H3Q8IVL6 736 aa8.12□□□□□ -1.11
ZEB1-219ENST00000560721 NHSL1Q5SYE7 1610 aa8.11□□□□□ -1.11
ZEB1-219ENST00000560721 QRICH2Q9H0J4 1663 aa8.11□□□□□ -1.11
ZEB1-219ENST00000560721 ZMYM3Q14202 1370 aa8.1□□□□□ -1.11
ZEB1-219ENST00000560721 TNRQ92752 1358 aa8.09□□□□□ -1.11
ZEB1-219ENST00000560721 CAMTA1Q9Y6Y1 1673 aa8.09□□□□□ -1.11
ZEB1-219ENST00000560721 LTBP4Q8N2S1 1624 aa8.09□□□□□ -1.11
ZEB1-219ENST00000560721 SCAF11Q99590 1463 aaKnown RBP8.09□□□□□ -1.11
ZEB1-219ENST00000560721 STRCP1A6NGW2 1772 aa8.09□□□□□ -1.11
ZEB1-219ENST00000560721 NINLQ9Y2I6 1382 aa8.08□□□□□ -1.12
ZEB1-219ENST00000560721 ZNF644Q9H582 1327 aaPredicted RBP8.08□□□□□ -1.12
ZEB1-219ENST00000560721 INSRP06213 1382 aa8.08□□□□□ -1.12
ZEB1-219ENST00000560721 FAM208AQ9UK61 1670 aaKnown RBP8.08□□□□□ -1.12
ZEB1-219ENST00000560721 TRPM3Q9HCF6 1732 aaPredicted RBP8.07□□□□□ -1.12
ZEB1-219ENST00000560721 MARF1Q9Y4F3 1742 aaKnown RBP8.07□□□□□ -1.12
ZEB1-219ENST00000560721 ANKARQ7Z5J8 1434 aa8.06□□□□□ -1.12
ZEB1-219ENST00000560721 AHDC1Q5TGY3 1603 aaPredicted RBP8.06□□□□□ -1.12
ZEB1-219ENST00000560721 HNRNPMP52272 730 aaKnown RBP eCLIP8.06□□□□□ -1.124e-6■■■■□ 20.1
ZEB1-219ENST00000560721 CCDC144AA2RUR9 1427 aa8.06□□□□□ -1.12
ZEB1-219ENST00000560721 TMEM2Q9UHN6 1383 aa8.05□□□□□ -1.12
ZEB1-219ENST00000560721 ALS2Q96Q42 1657 aa8.05□□□□□ -1.12
ZEB1-219ENST00000560721 ADAMTS13Q76LX8 1427 aa8.05□□□□□ -1.12
ZEB1-219ENST00000560721 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.05□□□□□ -1.12
ZEB1-219ENST00000560721 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.04□□□□□ -1.12
ZEB1-219ENST00000560721 SHPRHQ149N8 1683 aa8.04□□□□□ -1.12
ZEB1-219ENST00000560721 PKD2Q13563 968 aa8.04□□□□□ -1.12
ZEB1-219ENST00000560721 KIF20BQ96Q89 1820 aa8.04□□□□□ -1.12
ZEB1-219ENST00000560721 ABCA3Q99758 1704 aa8.03□□□□□ -1.12
ZEB1-219ENST00000560721 EIF3AQ14152 1382 aaKnown RBP8.03□□□□□ -1.12
ZEB1-219ENST00000560721 ABCC11Q96J66 1382 aa8.03□□□□□ -1.12
ZEB1-219ENST00000560721 MPHOSPH9Q99550 1183 aa8.03□□□□□ -1.12
ZEB1-219ENST00000560721 AFAP1Q8N556 730 aa8.02□□□□□ -1.12
ZEB1-219ENST00000560721 NPC1L1Q9UHC9 1359 aa8.02□□□□□ -1.13
ZEB1-219ENST00000560721 CICQ96RK0 1608 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-219ENST00000560721 PLCH1Q4KWH8 1693 aa8.02□□□□□ -1.13
ZEB1-219ENST00000560721 LRPPRCP42704 1394 aaKnown RBP8.01□□□□□ -1.13
ZEB1-219ENST00000560721 WNK3Q9BYP7 1800 aa8.01□□□□□ -1.13
ZEB1-219ENST00000560721 SIPA1L2Q9P2F8 1722 aaPredicted RBP8□□□□□ -1.13
ZEB1-219ENST00000560721 TTBK1Q5TCY1 1321 aaPredicted RBP8□□□□□ -1.13
ZEB1-219ENST00000560721 RIMS2Q9UQ26 1411 aa8□□□□□ -1.13
ZEB1-219ENST00000560721 TULP4Q9NRJ4 1543 aa8□□□□□ -1.13
ZEB1-219ENST00000560721 LMO7Q8WWI1 1683 aa7.99□□□□□ -1.13
ZEB1-219ENST00000560721 ATP7BP35670 1465 aa7.99□□□□□ -1.13
ZEB1-219ENST00000560721 KTN1Q86UP2 1357 aaKnown RBP7.99□□□□□ -1.13
ZEB1-219ENST00000560721 HDGFP51858 240 aaKnown RBP7.98□□□□□ -1.13
ZEB1-219ENST00000560721 PELP1Q8IZL8 1130 aaKnown RBP7.97□□□□□ -1.13
ZEB1-219ENST00000560721 RTN4Q9NQC3 1192 aaKnown RBP7.97□□□□□ -1.13
ZEB1-219ENST00000560721 NPHP4O75161 1426 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-219ENST00000560721 KCNH8Q96L42 1107 aa7.96□□□□□ -1.13
ZEB1-219ENST00000560721 NWD2Q9ULI1 1742 aa7.96□□□□□ -1.14
ZEB1-219ENST00000560721 ZNF831Q5JPB2 1677 aa7.96□□□□□ -1.14
ZEB1-219ENST00000560721 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.14
ZEB1-219ENST00000560721 RAPGEF3O95398 923 aa7.96□□□□□ -1.14
ZEB1-219ENST00000560721 TBX22Q9Y458 520 aa7.96□□□□□ -1.14
ZEB1-219ENST00000560721 SLIT3O75094 1523 aa7.95□□□□□ -1.14
ZEB1-219ENST00000560721 ROCK2O75116 1388 aaKnown RBP7.94□□□□□ -1.14
ZEB1-219ENST00000560721 ADAMTS7Q9UKP4 1686 aa7.94□□□□□ -1.14
ZEB1-219ENST00000560721 C14orf93Q9H972 538 aaKnown RBP7.94□□□□□ -1.14
ZEB1-219ENST00000560721 RGPD1P0DJD0 1748 aa7.93□□□□□ -1.14
ZEB1-219ENST00000560721 RGPD3A6NKT7 1758 aaPredicted RBP7.93□□□□□ -1.14
ZEB1-219ENST00000560721 RGPD4Q7Z3J3 1758 aa7.93□□□□□ -1.14
ZEB1-219ENST00000560721 PARP4Q9UKK3 1724 aaKnown RBP7.93□□□□□ -1.14
ZEB1-219ENST00000560721 WASHC2AQ641Q2 1341 aa7.92□□□□□ -1.14
ZEB1-219ENST00000560721 WASHC2CQ9Y4E1 1318 aa7.92□□□□□ -1.14
ZEB1-219ENST00000560721 PIK3C2AO00443 1686 aa7.92□□□□□ -1.14
ZEB1-219ENST00000560721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.92□□□□□ -1.14
ZEB1-219ENST00000560721 HNRNPUL2Q1KMD3 747 aaKnown RBP7.92□□□□□ -1.14
ZEB1-219ENST00000560721 ADGRL3Q9HAR2 1447 aa7.92□□□□□ -1.14
ZEB1-219ENST00000560721 PRKCSHP14314 528 aaPredicted RBP7.91□□□□□ -1.14
ZEB1-219ENST00000560721 SSH2Q76I76 1423 aa7.91□□□□□ -1.14
ZEB1-219ENST00000560721 NCBP3Q53F19 620 aaKnown RBP7.91□□□□□ -1.14
ZEB1-219ENST00000560721 YTHDC2Q9H6S0 1430 aaKnown RBP7.91□□□□□ -1.14
ZEB1-219ENST00000560721 CDK12Q9NYV4 1490 aaPredicted RBP7.91□□□□□ -1.14
ZEB1-219ENST00000560721 NSD2O96028 1365 aa7.91□□□□□ -1.14
ZEB1-219ENST00000560721 KIF24Q5T7B8 1368 aa7.91□□□□□ -1.14
ZEB1-219ENST00000560721 NCAPD2Q15021 1401 aa7.9□□□□□ -1.14
ZEB1-219ENST00000560721 KIF3BO15066 747 aa7.9□□□□□ -1.14
ZEB1-219ENST00000560721 THEMISQ8N1K5 641 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms