RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 KIF1BO60333 1816 aa10.37□□□□□ -0.75
HMBOX1-214ENST00000560357 PIK3C2BO00750 1634 aa10.37□□□□□ -0.75
HMBOX1-214ENST00000560357 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
HMBOX1-214ENST00000560357 NBPF8Q3BBV2 869 aa10.37□□□□□ -0.75
HMBOX1-214ENST00000560357 SLC52A1Q9NWF4 448 aa10.37□□□□□ -0.75
HMBOX1-214ENST00000560357 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
HMBOX1-214ENST00000560357 SPATA31D1Q6ZQQ2 1576 aa10.36□□□□□ -0.75
HMBOX1-214ENST00000560357 IDI1Q13907 227 aa10.36□□□□□ -0.75
HMBOX1-214ENST00000560357 DCAF11Q8TEB1 546 aa10.36□□□□□ -0.75
HMBOX1-214ENST00000560357 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
HMBOX1-214ENST00000560357 UHRF1BP1Q6BDS2 1440 aa10.35□□□□□ -0.75
HMBOX1-214ENST00000560357 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
HMBOX1-214ENST00000560357 ADAMTSL3P82987 1691 aa10.34□□□□□ -0.75
HMBOX1-214ENST00000560357 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
HMBOX1-214ENST00000560357 C3P01024 1663 aa10.34□□□□□ -0.75
HMBOX1-214ENST00000560357 MADDQ8WXG6 1647 aa10.33□□□□□ -0.76
HMBOX1-214ENST00000560357 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
HMBOX1-214ENST00000560357 CEBPAP49715 358 aaPredicted RBP10.33□□□□□ -0.76
HMBOX1-214ENST00000560357 STAC3Q96MF2 364 aa10.33□□□□□ -0.76
HMBOX1-214ENST00000560357 TNRQ92752 1358 aa10.32□□□□□ -0.76
HMBOX1-214ENST00000560357 PRAG1Q86YV5 1406 aa10.32□□□□□ -0.76
HMBOX1-214ENST00000560357 RIMS1Q86UR5 1692 aaKnown RBP10.31□□□□□ -0.76
HMBOX1-214ENST00000560357 ZNF326Q5BKZ1 582 aaKnown RBP10.31□□□□□ -0.76
HMBOX1-214ENST00000560357 TMEM131LA2VDJ0 1609 aa10.31□□□□□ -0.76
HMBOX1-214ENST00000560357 RPGRIP1LQ68CZ1 1315 aa10.31□□□□□ -0.76
HMBOX1-214ENST00000560357 IFT172Q9UG01 1749 aa10.3□□□□□ -0.76
HMBOX1-214ENST00000560357 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
HMBOX1-214ENST00000560357 MYO5BQ9ULV0 1848 aa10.3□□□□□ -0.76
HMBOX1-214ENST00000560357 ZNF316A6NFI3 1004 aaPredicted RBP10.29□□□□□ -0.76
HMBOX1-214ENST00000560357 MYOM2P54296 1465 aa10.29□□□□□ -0.76
HMBOX1-214ENST00000560357 RALGAPBQ86X10 1494 aa10.29□□□□□ -0.76
HMBOX1-214ENST00000560357 PPLO60437 1756 aa10.29□□□□□ -0.76
HMBOX1-214ENST00000560357 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
HMBOX1-214ENST00000560357 TRPM1Q7Z4N2 1603 aa10.28□□□□□ -0.76
HMBOX1-214ENST00000560357 A2ML1A8K2U0 1454 aa10.28□□□□□ -0.76
HMBOX1-214ENST00000560357 NLRP1Q9C000 1473 aa10.28□□□□□ -0.76
HMBOX1-214ENST00000560357 ADGRF5Q8IZF2 1346 aa10.28□□□□□ -0.76
HMBOX1-214ENST00000560357 NEXMIFQ5QGS0 1516 aa10.28□□□□□ -0.76
HMBOX1-214ENST00000560357 NRXN1Q9ULB1 1477 aa10.27□□□□□ -0.77
HMBOX1-214ENST00000560357 ZFYVE9O95405 1425 aa10.26□□□□□ -0.77
HMBOX1-214ENST00000560357 KDM5AP29375 1690 aaKnown RBP10.26□□□□□ -0.77
HMBOX1-214ENST00000560357 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
HMBOX1-214ENST00000560357 VGFO15240 615 aaPredicted RBP10.25□□□□□ -0.77
HMBOX1-214ENST00000560357 POTEHQ6S545 545 aa10.25□□□□□ -0.77
HMBOX1-214ENST00000560357 GPRASP1Q5JY77 1395 aa10.25□□□□□ -0.77
HMBOX1-214ENST00000560357 SETD1BQ9UPS6 1966 aaKnown RBP10.25□□□□□ -0.77
HMBOX1-214ENST00000560357 UBR1Q8IWV7 1749 aa10.24□□□□□ -0.77
HMBOX1-214ENST00000560357 KIAA1210Q9ULL0 1709 aa10.24□□□□□ -0.77
HMBOX1-214ENST00000560357 PTPRMP28827 1452 aa10.24□□□□□ -0.77
HMBOX1-214ENST00000560357 HSPA5P11021 654 aaKnown RBP10.24□□□□□ -0.77
HMBOX1-214ENST00000560357 EIF4G2P78344 907 aaKnown RBP eCLIP10.24□□□□□ -0.771e-6■■■□□ 15.8
HMBOX1-214ENST00000560357 NUTM2DQ5VT03 806 aaPredicted RBP10.24□□□□□ -0.77
HMBOX1-214ENST00000560357 CARD11Q9BXL7 1154 aa10.24□□□□□ -0.77
HMBOX1-214ENST00000560357 ROCK2O75116 1388 aaKnown RBP10.24□□□□□ -0.77
HMBOX1-214ENST00000560357 PIK3C2GO75747 1445 aa10.24□□□□□ -0.77
HMBOX1-214ENST00000560357 CFAP70Q5T0N1 1121 aa10.23□□□□□ -0.77
HMBOX1-214ENST00000560357 HIRIP3Q9BW71 556 aaPredicted RBP10.23□□□□□ -0.77
HMBOX1-214ENST00000560357 C14orf93Q9H972 538 aaKnown RBP10.23□□□□□ -0.77
HMBOX1-214ENST00000560357 RIMS2Q9UQ26 1411 aa10.23□□□□□ -0.77
HMBOX1-214ENST00000560357 LAMC1P11047 1609 aa10.22□□□□□ -0.77
HMBOX1-214ENST00000560357 MYO3AQ8NEV4 1616 aa10.22□□□□□ -0.77
HMBOX1-214ENST00000560357 TMEM2Q9UHN6 1383 aa10.22□□□□□ -0.77
HMBOX1-214ENST00000560357 KDM4FA0A1W2PPD8 638 aa10.21□□□□□ -0.77
HMBOX1-214ENST00000560357 THEMISQ8N1K5 641 aaPredicted RBP10.21□□□□□ -0.77
HMBOX1-214ENST00000560357 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMBOX1-214ENST00000560357 USP47Q96K76 1375 aa10.21□□□□□ -0.78
HMBOX1-214ENST00000560357 HDGFP51858 240 aaKnown RBP10.2□□□□□ -0.78
HMBOX1-214ENST00000560357 CEP170BQ9Y4F5 1589 aaPredicted RBP10.19□□□□□ -0.78
HMBOX1-214ENST00000560357 SETBP1Q9Y6X0 1596 aa10.19□□□□□ -0.78
HMBOX1-214ENST00000560357 SLIT1O75093 1534 aa10.19□□□□□ -0.78
HMBOX1-214ENST00000560357 ARHGAP23Q9P227 1491 aa10.19□□□□□ -0.78
HMBOX1-214ENST00000560357 ZNF142P52746 1687 aaPredicted RBP10.18□□□□□ -0.78
HMBOX1-214ENST00000560357 LTKP29376 864 aa10.18□□□□□ -0.78
HMBOX1-214ENST00000560357 IQGAP1P46940 1657 aa10.18□□□□□ -0.78
HMBOX1-214ENST00000560357 ADGRB1O14514 1584 aa10.18□□□□□ -0.78
HMBOX1-214ENST00000560357 SCAF11Q99590 1463 aaKnown RBP10.17□□□□□ -0.78
HMBOX1-214ENST00000560357 ST20-MTHFSA0A0A6YYL1 179 aa10.17□□□□□ -0.78
HMBOX1-214ENST00000560357 TMEM132EQ6IEE7 984 aa10.17□□□□□ -0.78
HMBOX1-214ENST00000560357 TXNDC2Q86VQ3 553 aa10.17□□□□□ -0.78
HMBOX1-214ENST00000560357 ALKQ9UM73 1620 aa10.17□□□□□ -0.78
HMBOX1-214ENST00000560357 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
HMBOX1-214ENST00000560357 EID1Q9Y6B2 187 aa10.16□□□□□ -0.78
HMBOX1-214ENST00000560357 PLEKHG1Q9ULL1 1385 aa10.15□□□□□ -0.78
HMBOX1-214ENST00000560357 NRXN3Q9Y4C0 1643 aa10.15□□□□□ -0.78
HMBOX1-214ENST00000560357 ASXL1Q8IXJ9 1541 aa10.15□□□□□ -0.78
HMBOX1-214ENST00000560357 SETD1AO15047 1707 aaKnown RBP10.15□□□□□ -0.78
HMBOX1-214ENST00000560357 TESK2Q96S53 571 aa10.14□□□□□ -0.79
HMBOX1-214ENST00000560357 WASHC2AQ641Q2 1341 aa10.13□□□□□ -0.79
HMBOX1-214ENST00000560357 AKT1S1Q96B36 256 aa10.13□□□□□ -0.79
HMBOX1-214ENST00000560357 TRAK1Q9UPV9 953 aa10.13□□□□□ -0.79
HMBOX1-214ENST00000560357 ADAMTS13Q76LX8 1427 aa10.13□□□□□ -0.79
HMBOX1-214ENST00000560357 CCDC7Q96M83 1385 aa10.13□□□□□ -0.79
HMBOX1-214ENST00000560357 MED14O60244 1454 aa10.12□□□□□ -0.79
HMBOX1-214ENST00000560357 DIEXFQ68CQ4 756 aaKnown RBP10.12□□□□□ -0.79
HMBOX1-214ENST00000560357 ANKLE2Q86XL3 938 aa10.12□□□□□ -0.79
HMBOX1-214ENST00000560357 POLR1AO95602 1720 aaPredicted RBP10.12□□□□□ -0.79
HMBOX1-214ENST00000560357 METP08581 1390 aa10.12□□□□□ -0.79
HMBOX1-214ENST00000560357 EIF3AQ14152 1382 aaKnown RBP10.12□□□□□ -0.79
HMBOX1-214ENST00000560357 KIF7Q2M1P5 1343 aa10.11□□□□□ -0.79
HMBOX1-214ENST00000560357 YTHDC2Q9H6S0 1430 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 330.1 ms