RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
TPM1-221ENST00000559831 NUTM2DQ5VT03 806 aaPredicted RBP14.92□□□□□ -0.02
TPM1-221ENST00000559831 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
TPM1-221ENST00000559831 MYOM2P54296 1465 aa14.91□□□□□ -0.02
TPM1-221ENST00000559831 NBPF8Q3BBV2 869 aa14.91□□□□□ -0.02
TPM1-221ENST00000559831 RIMS2Q9UQ26 1411 aa14.91□□□□□ -0.02
TPM1-221ENST00000559831 PRAG1Q86YV5 1406 aa14.9□□□□□ -0.02
TPM1-221ENST00000559831 TRPM1Q7Z4N2 1603 aa14.89□□□□□ -0.03
TPM1-221ENST00000559831 ADGRF5Q8IZF2 1346 aa14.88□□□□□ -0.03
TPM1-221ENST00000559831 TMEM2Q9UHN6 1383 aa14.87□□□□□ -0.03
TPM1-221ENST00000559831 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
TPM1-221ENST00000559831 THEMISQ8N1K5 641 aaPredicted RBP14.87□□□□□ -0.03
TPM1-221ENST00000559831 STAC3Q96MF2 364 aa14.87□□□□□ -0.03
TPM1-221ENST00000559831 SENP3Q9H4L4 574 aaPredicted RBP14.87□□□□□ -0.03
TPM1-221ENST00000559831 VGFO15240 615 aaPredicted RBP14.86□□□□□ -0.03
TPM1-221ENST00000559831 NRXN1Q9ULB1 1477 aa14.86□□□□□ -0.03
TPM1-221ENST00000559831 SLIT1O75093 1534 aa14.86□□□□□ -0.03
TPM1-221ENST00000559831 KIAA1210Q9ULL0 1709 aa14.86□□□□□ -0.03
TPM1-221ENST00000559831 RALGAPBQ86X10 1494 aa14.85□□□□□ -0.03
TPM1-221ENST00000559831 HDGFP51858 240 aaKnown RBP14.85□□□□□ -0.03
TPM1-221ENST00000559831 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.85□□□□□ -0.03
TPM1-221ENST00000559831 ARHGAP23Q9P227 1491 aa14.84□□□□□ -0.03
TPM1-221ENST00000559831 IQGAP1P46940 1657 aa14.84□□□□□ -0.03
TPM1-221ENST00000559831 PIK3C2GO75747 1445 aa14.83□□□□□ -0.03
TPM1-221ENST00000559831 POLR1AO95602 1720 aaPredicted RBP14.83□□□□□ -0.03
TPM1-221ENST00000559831 EID1Q9Y6B2 187 aa14.83□□□□□ -0.04
TPM1-221ENST00000559831 LAMC1P11047 1609 aa14.83□□□□□ -0.04
TPM1-221ENST00000559831 TXNDC2Q86VQ3 553 aa14.82□□□□□ -0.04
TPM1-221ENST00000559831 BCANQ96GW7 911 aa14.82□□□□□ -0.04
TPM1-221ENST00000559831 ROCK2O75116 1388 aaKnown RBP14.82□□□□□ -0.04
TPM1-221ENST00000559831 LTKP29376 864 aa14.81□□□□□ -0.04
TPM1-221ENST00000559831 SCAF11Q99590 1463 aaKnown RBP14.81□□□□□ -0.04
TPM1-221ENST00000559831 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
TPM1-221ENST00000559831 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
TPM1-221ENST00000559831 CFAP70Q5T0N1 1121 aa14.8□□□□□ -0.04
TPM1-221ENST00000559831 SETD1AO15047 1707 aaKnown RBP14.79□□□□□ -0.04
TPM1-221ENST00000559831 LMTK3Q96Q04 1460 aa14.79□□□□□ -0.04
TPM1-221ENST00000559831 ALKQ9UM73 1620 aa14.79□□□□□ -0.04
TPM1-221ENST00000559831 SETBP1Q9Y6X0 1596 aa14.79□□□□□ -0.04
TPM1-221ENST00000559831 PLEKHG1Q9ULL1 1385 aa14.78□□□□□ -0.04
TPM1-221ENST00000559831 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
TPM1-221ENST00000559831 CARD11Q9BXL7 1154 aa14.78□□□□□ -0.04
TPM1-221ENST00000559831 C14orf93Q9H972 538 aaKnown RBP14.77□□□□□ -0.05
TPM1-221ENST00000559831 HSPA2P54652 639 aa14.76□□□□□ -0.05
TPM1-221ENST00000559831 GPRASP1Q5JY77 1395 aa14.75□□□□□ -0.05
TPM1-221ENST00000559831 ASXL1Q8IXJ9 1541 aa14.75□□□□□ -0.05
TPM1-221ENST00000559831 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
TPM1-221ENST00000559831 ADGRB1O14514 1584 aa14.74□□□□□ -0.05
TPM1-221ENST00000559831 TMEM132EQ6IEE7 984 aa14.74□□□□□ -0.05
TPM1-221ENST00000559831 USP47Q96K76 1375 aa14.73□□□□□ -0.05
TPM1-221ENST00000559831 EIF4G2P78344 907 aaKnown RBP eCLIP14.73□□□□□ -0.05
TPM1-221ENST00000559831 ADAMTS13Q76LX8 1427 aa14.73□□□□□ -0.05
TPM1-221ENST00000559831 DIP2AQ14689 1571 aa14.73□□□□□ -0.05
TPM1-221ENST00000559831 HSPA5P11021 654 aaKnown RBP14.72□□□□□ -0.05
TPM1-221ENST00000559831 SLC26A8Q96RN1 970 aa14.72□□□□□ -0.05
TPM1-221ENST00000559831 HIRIP3Q9BW71 556 aaPredicted RBP14.72□□□□□ -0.05
TPM1-221ENST00000559831 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
TPM1-221ENST00000559831 STRCQ7RTU9 1775 aa14.71□□□□□ -0.05
TPM1-221ENST00000559831 ARHGEF28Q8N1W1 1705 aaKnown RBP14.71□□□□□ -0.05
TPM1-221ENST00000559831 STK26Q9P289 416 aa14.7□□□□□ -0.06
TPM1-221ENST00000559831 MED14O60244 1454 aa14.69□□□□□ -0.06
TPM1-221ENST00000559831 YTHDC2Q9H6S0 1430 aaKnown RBP14.69□□□□□ -0.06
TPM1-221ENST00000559831 TRAK1Q9UPV9 953 aa14.69□□□□□ -0.06
TPM1-221ENST00000559831 METP08581 1390 aa14.69□□□□□ -0.06
TPM1-221ENST00000559831 KNDC1Q76NI1 1749 aa14.69□□□□□ -0.06
TPM1-221ENST00000559831 EIF3AQ14152 1382 aaKnown RBP14.68□□□□□ -0.06
TPM1-221ENST00000559831 TBX22Q9Y458 520 aa14.67□□□□□ -0.06
TPM1-221ENST00000559831 QRICH2Q9H0J4 1663 aa14.67□□□□□ -0.06
TPM1-221ENST00000559831 LRPPRCP42704 1394 aaKnown RBP14.66□□□□□ -0.06
TPM1-221ENST00000559831 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
TPM1-221ENST00000559831 CHD2O14647 1828 aaKnown RBP14.66□□□□□ -0.06
TPM1-221ENST00000559831 ST20-MTHFSA0A0A6YYL1 179 aa14.65□□□□□ -0.06
TPM1-221ENST00000559831 PTPRUQ92729 1446 aa14.64□□□□□ -0.07
TPM1-221ENST00000559831 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
TPM1-221ENST00000559831 CPS1P31327 1500 aa14.63□□□□□ -0.07
TPM1-221ENST00000559831 DLC1Q96QB1 1528 aa14.63□□□□□ -0.07
TPM1-221ENST00000559831 CENPJQ9HC77 1338 aaPredicted RBP14.62□□□□□ -0.07
TPM1-221ENST00000559831 ABCC11Q96J66 1382 aa14.61□□□□□ -0.07
TPM1-221ENST00000559831 PIK3R4Q99570 1358 aa14.61□□□□□ -0.07
TPM1-221ENST00000559831 SAFB2Q14151 953 aaKnown RBP eCLIP14.61□□□□□ -0.07
TPM1-221ENST00000559831 POGKQ9P215 609 aa14.61□□□□□ -0.07
TPM1-221ENST00000559831 AMOTL2Q9Y2J4 779 aa14.61□□□□□ -0.07
TPM1-221ENST00000559831 TECPR2O15040 1411 aa14.6□□□□□ -0.07
TPM1-221ENST00000559831 PRAM1Q96QH2 718 aa14.6□□□□□ -0.07
TPM1-221ENST00000559831 NWD1Q149M9 1564 aa14.59□□□□□ -0.07
TPM1-221ENST00000559831 ROBO2Q9HCK4 1378 aa14.59□□□□□ -0.07
TPM1-221ENST00000559831 PLEKHH1Q9ULM0 1364 aa14.59□□□□□ -0.07
TPM1-221ENST00000559831 WAPLQ7Z5K2 1190 aa14.58□□□□□ -0.08
TPM1-221ENST00000559831 POLR3GLQ9BT43 218 aa14.58□□□□□ -0.08
TPM1-221ENST00000559831 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
TPM1-221ENST00000559831 TESK2Q96S53 571 aa14.57□□□□□ -0.08
TPM1-221ENST00000559831 PTCH1Q13635 1447 aa14.57□□□□□ -0.08
TPM1-221ENST00000559831 FAM135BQ49AJ0 1406 aa14.57□□□□□ -0.08
TPM1-221ENST00000559831 KCNA6P17658 529 aa14.56□□□□□ -0.08
TPM1-221ENST00000559831 TMF1P82094 1093 aa14.56□□□□□ -0.08
TPM1-221ENST00000559831 MINK1Q8N4C8 1332 aaPredicted RBP14.56□□□□□ -0.08
TPM1-221ENST00000559831 DISP3Q9P2K9 1392 aa14.56□□□□□ -0.08
TPM1-221ENST00000559831 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
TPM1-221ENST00000559831 SIRT1Q96EB6 747 aa14.55□□□□□ -0.08
TPM1-221ENST00000559831 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms