RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
CRNDE-207ENST00000559598 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
CRNDE-207ENST00000559598 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
CRNDE-207ENST00000559598 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
CRNDE-207ENST00000559598 PROX2Q3B8N5 592 aa11.23□□□□□ -0.61
CRNDE-207ENST00000559598 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
CRNDE-207ENST00000559598 FCHSD2O94868 740 aa11.22□□□□□ -0.61
CRNDE-207ENST00000559598 PRSS12P56730 875 aa11.22□□□□□ -0.61
CRNDE-207ENST00000559598 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
CRNDE-207ENST00000559598 TRIM6-TRIM34B2RNG4 842 aa11.21□□□□□ -0.61
CRNDE-207ENST00000559598 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
CRNDE-207ENST00000559598 RBM27Q9P2N5 1060 aaKnown RBP11.2□□□□□ -0.62
CRNDE-207ENST00000559598 GPR37O15354 613 aa11.19□□□□□ -0.62
CRNDE-207ENST00000559598 ANKK1Q8NFD2 765 aa11.19□□□□□ -0.62
CRNDE-207ENST00000559598 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
CRNDE-207ENST00000559598 CLASP1Q7Z460 1538 aa11.18□□□□□ -0.62
CRNDE-207ENST00000559598 CCDC88BA6NC98 1476 aa11.18□□□□□ -0.62
CRNDE-207ENST00000559598 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.622e-8■■■■□ 22.7
CRNDE-207ENST00000559598 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
CRNDE-207ENST00000559598 HIC1Q14526 733 aa11.17□□□□□ -0.62
CRNDE-207ENST00000559598 PADI6Q6TGC4 694 aa11.17□□□□□ -0.62
CRNDE-207ENST00000559598 KIAA1468Q9P260 1216 aa11.17□□□□□ -0.62
CRNDE-207ENST00000559598 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
CRNDE-207ENST00000559598 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
CRNDE-207ENST00000559598 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
CRNDE-207ENST00000559598 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
CRNDE-207ENST00000559598 IFFO2Q5TF58 517 aa11.15□□□□□ -0.62
CRNDE-207ENST00000559598 GNPATO15228 680 aa11.14□□□□□ -0.63
CRNDE-207ENST00000559598 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
CRNDE-207ENST00000559598 NYAP1Q6ZVC0 841 aa11.11□□□□□ -0.63
CRNDE-207ENST00000559598 ZC3H15Q8WU90 426 aaKnown RBP11.11□□□□□ -0.63
CRNDE-207ENST00000559598 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
CRNDE-207ENST00000559598 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
CRNDE-207ENST00000559598 SOWAHBA6NEL2 793 aa11.1□□□□□ -0.63
CRNDE-207ENST00000559598 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
CRNDE-207ENST00000559598 FECHP22830 423 aa11.1□□□□□ -0.63
CRNDE-207ENST00000559598 C3orf80F5H4A9 247 aa11.09□□□□□ -0.63
CRNDE-207ENST00000559598 FAM98CQ17RN3 349 aaKnown RBP11.09□□□□□ -0.63
CRNDE-207ENST00000559598 TATDN2Q93075 761 aa11.09□□□□□ -0.63
CRNDE-207ENST00000559598 SEPT9Q9UHD8 586 aaPredicted RBP11.09□□□□□ -0.63
CRNDE-207ENST00000559598 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
CRNDE-207ENST00000559598 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
CRNDE-207ENST00000559598 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
CRNDE-207ENST00000559598 SMAPO00193 183 aa11.07□□□□□ -0.64
CRNDE-207ENST00000559598 ADGRG1Q9Y653 693 aa11.07□□□□□ -0.64
CRNDE-207ENST00000559598 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
CRNDE-207ENST00000559598 ZMYND10O75800 440 aa11.06□□□□□ -0.64
CRNDE-207ENST00000559598 RGS20O76081 388 aa11.06□□□□□ -0.64
CRNDE-207ENST00000559598 BCAMP50895 628 aa11.06□□□□□ -0.64
CRNDE-207ENST00000559598 SOGA1O94964 1423 aa11.06□□□□□ -0.64
CRNDE-207ENST00000559598 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
CRNDE-207ENST00000559598 RAD54L2Q9Y4B4 1467 aa11.06□□□□□ -0.64
CRNDE-207ENST00000559598 FAM161AQ3B820 660 aa11.05□□□□□ -0.64
CRNDE-207ENST00000559598 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
CRNDE-207ENST00000559598 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
CRNDE-207ENST00000559598 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
CRNDE-207ENST00000559598 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
CRNDE-207ENST00000559598 EYA1Q99502 592 aa11.04□□□□□ -0.64
CRNDE-207ENST00000559598 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
CRNDE-207ENST00000559598 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
CRNDE-207ENST00000559598 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
CRNDE-207ENST00000559598 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
CRNDE-207ENST00000559598 FGD5Q6ZNL6 1462 aa11.03□□□□□ -0.64
CRNDE-207ENST00000559598 OATP04181 439 aa11.02□□□□□ -0.65
CRNDE-207ENST00000559598 A0A0G2JS52 829 aa11.01□□□□□ -0.65
CRNDE-207ENST00000559598 ITGBL1O95965 494 aaPredicted RBP11.01□□□□□ -0.65
CRNDE-207ENST00000559598 TSR3Q9UJK0 312 aaKnown RBP11.01□□□□□ -0.65
CRNDE-207ENST00000559598 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
CRNDE-207ENST00000559598 IRF6O14896 467 aa10.99□□□□□ -0.65
CRNDE-207ENST00000559598 METTL3Q86U44 580 aaKnown RBP10.99□□□□□ -0.65
CRNDE-207ENST00000559598 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
CRNDE-207ENST00000559598 PXYLP1Q8TE99 480 aa10.99□□□□□ -0.65
CRNDE-207ENST00000559598 WBP1LQ9NX94 342 aa10.99□□□□□ -0.65
CRNDE-207ENST00000559598 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
CRNDE-207ENST00000559598 CCDC102AQ96A19 550 aa10.97□□□□□ -0.65
CRNDE-207ENST00000559598 KIF13AQ9H1H9 1805 aa10.96□□□□□ -0.65
CRNDE-207ENST00000559598 CUX1P39880 1505 aa10.96□□□□□ -0.65
CRNDE-207ENST00000559598 RCCD1A6NED2 376 aa10.96□□□□□ -0.65
CRNDE-207ENST00000559598 DNAJB2P25686 324 aa10.96□□□□□ -0.65
CRNDE-207ENST00000559598 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
CRNDE-207ENST00000559598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.95□□□□□ -0.66
CRNDE-207ENST00000559598 SAMD7Q7Z3H4 446 aa10.95□□□□□ -0.66
CRNDE-207ENST00000559598 HDGFP51858 240 aaKnown RBP10.94□□□□□ -0.66
CRNDE-207ENST00000559598 KCNC4Q03721 635 aa10.94□□□□□ -0.66
CRNDE-207ENST00000559598 PHOX2BQ99453 314 aa10.94□□□□□ -0.66
CRNDE-207ENST00000559598 PPP4CP60510 307 aa10.93□□□□□ -0.66
CRNDE-207ENST00000559598 TMEM134Q9H6X4 195 aa10.93□□□□□ -0.66
CRNDE-207ENST00000559598 SHROOM2Q13796 1616 aa10.92□□□□□ -0.66
CRNDE-207ENST00000559598 CEP170Q5SW79 1584 aa10.92□□□□□ -0.66
CRNDE-207ENST00000559598 SWT1Q5T5J6 900 aaKnown RBP10.92□□□□□ -0.66
CRNDE-207ENST00000559598 ABCA10Q8WWZ4 1543 aa10.92□□□□□ -0.66
CRNDE-207ENST00000559598 GRIN2AQ12879 1464 aa10.92□□□□□ -0.66
CRNDE-207ENST00000559598 SLC24A3Q9HC58 644 aa10.9□□□□□ -0.66
CRNDE-207ENST00000559598 NUP160Q12769 1436 aa10.9□□□□□ -0.66
CRNDE-207ENST00000559598 ADAMTS12P58397 1594 aa10.9□□□□□ -0.67
CRNDE-207ENST00000559598 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
CRNDE-207ENST00000559598 NLRP7Q8WX94 980 aa10.89□□□□□ -0.67
CRNDE-207ENST00000559598 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
CRNDE-207ENST00000559598 SLF2Q8IX21 1173 aa10.88□□□□□ -0.67
CRNDE-207ENST00000559598 NECTIN2Q92692 538 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms