RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 RGS12O14924 1447 aa15.57■□□□□ 0.08
SMAD3-211ENST00000559460 KDM5AP29375 1690 aaKnown RBP15.57■□□□□ 0.08
SMAD3-211ENST00000559460 ATF3P18847 181 aa15.56■□□□□ 0.08
SMAD3-211ENST00000559460 CADPS2Q86UW7 1296 aa15.56■□□□□ 0.08
SMAD3-211ENST00000559460 AHDC1Q5TGY3 1603 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-211ENST00000559460 MROH1Q8NDA8 1641 aa15.56■□□□□ 0.08
SMAD3-211ENST00000559460 TET3O43151 1660 aa15.55■□□□□ 0.08
SMAD3-211ENST00000559460 KANK1Q14678 1352 aa15.54■□□□□ 0.08
SMAD3-211ENST00000559460 NGLY1Q96IV0 654 aa15.54■□□□□ 0.08
SMAD3-211ENST00000559460 QTRT2Q9H974 415 aaKnown RBP15.54■□□□□ 0.08
SMAD3-211ENST00000559460 NCOA3Q9Y6Q9 1424 aa15.53■□□□□ 0.08
SMAD3-211ENST00000559460 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
SMAD3-211ENST00000559460 C8orf37Q96NL8 207 aa15.53■□□□□ 0.08
SMAD3-211ENST00000559460 MAST1Q9Y2H9 1570 aa15.53■□□□□ 0.08
SMAD3-211ENST00000559460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.084e-8■■□□□ 12.6
SMAD3-211ENST00000559460 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.07
SMAD3-211ENST00000559460 HDGFP51858 240 aaKnown RBP15.5■□□□□ 0.07
SMAD3-211ENST00000559460 IDI1Q13907 227 aa15.5■□□□□ 0.07
SMAD3-211ENST00000559460 C19orf44Q9H6X5 657 aa15.49■□□□□ 0.07
SMAD3-211ENST00000559460 ADGRB3O60242 1522 aa15.48■□□□□ 0.07
SMAD3-211ENST00000559460 SETBP1Q9Y6X0 1596 aa15.48■□□□□ 0.07
SMAD3-211ENST00000559460 BRINP3Q76B58 766 aa15.46■□□□□ 0.07
SMAD3-211ENST00000559460 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
SMAD3-211ENST00000559460 PLEKHG1Q9ULL1 1385 aa15.46■□□□□ 0.07
SMAD3-211ENST00000559460 DIP2AQ14689 1571 aa15.45■□□□□ 0.06
SMAD3-211ENST00000559460 ERBINQ96RT1 1412 aa15.45■□□□□ 0.06
SMAD3-211ENST00000559460 SRCAPQ6ZRS2 3230 aa15.45■□□□□ 0.06
SMAD3-211ENST00000559460 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
SMAD3-211ENST00000559460 CHD2O14647 1828 aaKnown RBP15.45■□□□□ 0.06
SMAD3-211ENST00000559460 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.44■□□□□ 0.06
SMAD3-211ENST00000559460 CCDC125Q86Z20 511 aa15.44■□□□□ 0.06
SMAD3-211ENST00000559460 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
SMAD3-211ENST00000559460 SLC52A1Q9NWF4 448 aa15.43■□□□□ 0.06
SMAD3-211ENST00000559460 TBX22Q9Y458 520 aa15.42■□□□□ 0.06
SMAD3-211ENST00000559460 ADAMTS2O95450 1211 aa15.41■□□□□ 0.06
SMAD3-211ENST00000559460 TRPC5Q9UL62 973 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-211ENST00000559460 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
SMAD3-211ENST00000559460 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
SMAD3-211ENST00000559460 USP21Q9UK80 565 aa15.4■□□□□ 0.06
SMAD3-211ENST00000559460 RIMS2Q9UQ26 1411 aa15.4■□□□□ 0.06
SMAD3-211ENST00000559460 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMAD3-211ENST00000559460 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
SMAD3-211ENST00000559460 DCCP43146 1447 aa15.38■□□□□ 0.05
SMAD3-211ENST00000559460 LMTK2Q8IWU2 1503 aa15.38■□□□□ 0.05
SMAD3-211ENST00000559460 PNPLA6Q8IY17 1366 aa15.37■□□□□ 0.05
SMAD3-211ENST00000559460 PIK3R4Q99570 1358 aa15.37■□□□□ 0.05
SMAD3-211ENST00000559460 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
SMAD3-211ENST00000559460 NOS1P29475 1434 aa15.36■□□□□ 0.05
SMAD3-211ENST00000559460 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
SMAD3-211ENST00000559460 SF3B2Q13435 895 aaKnown RBP15.35■□□□□ 0.05
SMAD3-211ENST00000559460 NHSL1Q5SYE7 1610 aa15.34■□□□□ 0.05
SMAD3-211ENST00000559460 TRPM2O94759 1503 aa15.33■□□□□ 0.05
SMAD3-211ENST00000559460 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.04
SMAD3-211ENST00000559460 MST1RQ04912 1400 aa15.31■□□□□ 0.04
SMAD3-211ENST00000559460 LRP5O75197 1615 aa15.31■□□□□ 0.04
SMAD3-211ENST00000559460 GCC2Q8IWJ2 1684 aa15.31■□□□□ 0.04
SMAD3-211ENST00000559460 ADAMTS13Q76LX8 1427 aa15.3■□□□□ 0.04
SMAD3-211ENST00000559460 DDX17Q92841 729 aaKnown RBP15.3■□□□□ 0.04
SMAD3-211ENST00000559460 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
SMAD3-211ENST00000559460 ATRNO75882 1429 aa15.29■□□□□ 0.04
SMAD3-211ENST00000559460 BLMP54132 1417 aaPredicted RBP15.29■□□□□ 0.04
SMAD3-211ENST00000559460 PTCH1Q13635 1447 aa15.28■□□□□ 0.04
SMAD3-211ENST00000559460 CROCC2H7BZ55 1655 aa15.28■□□□□ 0.04
SMAD3-211ENST00000559460 ANKRD30AQ9BXX3 1397 aa15.27■□□□□ 0.04
SMAD3-211ENST00000559460 FNBP4Q8N3X1 1017 aaPredicted RBP15.27■□□□□ 0.04
SMAD3-211ENST00000559460 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.03
SMAD3-211ENST00000559460 TMEM131LA2VDJ0 1609 aa15.26■□□□□ 0.03
SMAD3-211ENST00000559460 ABCC5O15440 1437 aa15.25■□□□□ 0.03
SMAD3-211ENST00000559460 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
SMAD3-211ENST00000559460 GJD4Q96KN9 370 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-211ENST00000559460 CHIC2Q9UKJ5 165 aa15.23■□□□□ 0.03
SMAD3-211ENST00000559460 DAPK1P53355 1430 aa15.23■□□□□ 0.03
SMAD3-211ENST00000559460 PTPRUQ92729 1446 aa15.23■□□□□ 0.03
SMAD3-211ENST00000559460 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
SMAD3-211ENST00000559460 PSDA5PKW4 1024 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-211ENST00000559460 YY1P25490 414 aa15.19■□□□□ 0.02
SMAD3-211ENST00000559460 C1orf167Q5SNV9 1468 aa15.19■□□□□ 0.02
SMAD3-211ENST00000559460 SOS2Q07890 1332 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-211ENST00000559460 PTPN23Q9H3S7 1636 aa15.18■□□□□ 0.02
SMAD3-211ENST00000559460 XRN1Q8IZH2 1706 aaKnown RBP15.18■□□□□ 0.02
SMAD3-211ENST00000559460 UNC13BO14795 1591 aa15.18■□□□□ 0.02
SMAD3-211ENST00000559460 HRCP23327 699 aa15.17■□□□□ 0.02
SMAD3-211ENST00000559460 BAG6P46379 1132 aa15.17■□□□□ 0.02
SMAD3-211ENST00000559460 BCL9LQ86UU0 1499 aa15.16■□□□□ 0.02
SMAD3-211ENST00000559460 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
SMAD3-211ENST00000559460 EP400Q96L91 3159 aa15.15■□□□□ 0.02
SMAD3-211ENST00000559460 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-211ENST00000559460 NALCNQ8IZF0 1738 aa15.14■□□□□ 0.01
SMAD3-211ENST00000559460 ORAI2Q96SN7 254 aa15.13■□□□□ 0.01
SMAD3-211ENST00000559460 LAMC1P11047 1609 aa15.13■□□□□ 0.01
SMAD3-211ENST00000559460 MYOM2P54296 1465 aa15.13■□□□□ 0.01
SMAD3-211ENST00000559460 RALGAPBQ86X10 1494 aa15.13■□□□□ 0.01
SMAD3-211ENST00000559460 SPHKAPQ2M3C7 1700 aa15.12■□□□□ 0.01
SMAD3-211ENST00000559460 VPS8Q8N3P4 1428 aa15.12■□□□□ 0.01
SMAD3-211ENST00000559460 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
SMAD3-211ENST00000559460 ZNF326Q5BKZ1 582 aaKnown RBP15.12■□□□□ 0.01
SMAD3-211ENST00000559460 UNC5CLQ8IV45 518 aa15.12■□□□□ 0.01
SMAD3-211ENST00000559460 NPHP3Q7Z494 1330 aa15.12■□□□□ 0.01
SMAD3-211ENST00000559460 ANKRD50Q9ULJ7 1429 aa15.11■□□□□ 0.01
SMAD3-211ENST00000559460 A0A0G2JS52 829 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms