RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 STRCP1A6NGW2 1772 aa27.8■■■□□ 2.04
CASC4-209ENST00000559222 SENP3Q9H4L4 574 aaPredicted RBP27.79■■■□□ 2.04
CASC4-209ENST00000559222 NUTM2DQ5VT03 806 aaPredicted RBP27.77■■■□□ 2.04
CASC4-209ENST00000559222 EID1Q9Y6B2 187 aa27.76■■■□□ 2.03
CASC4-209ENST00000559222 NEXMIFQ5QGS0 1516 aa27.76■■■□□ 2.03
CASC4-209ENST00000559222 HRCP23327 699 aa27.73■■■□□ 2.03
CASC4-209ENST00000559222 ACIN1Q9UKV3 1341 aaKnown RBP27.71■■■□□ 2.03
CASC4-209ENST00000559222 CCDC144AA2RUR9 1427 aa27.7■■■□□ 2.03
CASC4-209ENST00000559222 TRIM26Q12899 539 aaPredicted RBP27.7■■■□□ 2.02
CASC4-209ENST00000559222 NRXN3Q9Y4C0 1643 aa27.7■■■□□ 2.02
CASC4-209ENST00000559222 PPLO60437 1756 aa27.69■■■□□ 2.02
CASC4-209ENST00000559222 PLEKHG1Q9ULL1 1385 aa27.69■■■□□ 2.02
CASC4-209ENST00000559222 ZNF326Q5BKZ1 582 aaKnown RBP27.68■■■□□ 2.02
CASC4-209ENST00000559222 CERKQ8TCT0 537 aa27.67■■■□□ 2.02
CASC4-209ENST00000559222 SLC26A8Q96RN1 970 aa27.67■■■□□ 2.02
CASC4-209ENST00000559222 PPP1R15AO75807 674 aaPredicted RBP27.66■■■□□ 2.02
CASC4-209ENST00000559222 IFT172Q9UG01 1749 aa27.66■■■□□ 2.02
CASC4-209ENST00000559222 SPATA31E1Q6ZUB1 1445 aa27.66■■■□□ 2.02
CASC4-209ENST00000559222 ANKRD30BQ9BXX2 1392 aa27.64■■■□□ 2.02
CASC4-209ENST00000559222 ADAMTS13Q76LX8 1427 aa27.64■■■□□ 2.02
CASC4-209ENST00000559222 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.62■■■□□ 2.01
CASC4-209ENST00000559222 SETBP1Q9Y6X0 1596 aa27.6■■■□□ 2.01
CASC4-209ENST00000559222 BCANQ96GW7 911 aa27.6■■■□□ 2.01
CASC4-209ENST00000559222 CPS1P31327 1500 aa27.6■■■□□ 2.01
CASC4-209ENST00000559222 XIRP1Q702N8 1843 aaKnown RBP27.59■■■□□ 2.01
CASC4-209ENST00000559222 CHD2O14647 1828 aaKnown RBP27.58■■■□□ 2.01
CASC4-209ENST00000559222 NWD1Q149M9 1564 aa27.58■■■□□ 2.01
CASC4-209ENST00000559222 DIP2AQ14689 1571 aa27.57■■■□□ 2
CASC4-209ENST00000559222 SETD1AO15047 1707 aaKnown RBP27.56■■■□□ 2
CASC4-209ENST00000559222 HDGFP51858 240 aaKnown RBP27.56■■■□□ 2
CASC4-209ENST00000559222 RGL3Q3MIN7 710 aa27.56■■■□□ 2
CASC4-209ENST00000559222 LRRC7Q96NW7 1537 aa27.55■■■□□ 2
CASC4-209ENST00000559222 IQSEC2Q5JU85 1478 aa27.51■■□□□ 1.99
CASC4-209ENST00000559222 PTPRUQ92729 1446 aa27.5■■□□□ 1.99
CASC4-209ENST00000559222 RPGRIP1LQ68CZ1 1315 aa27.49■■□□□ 1.99
CASC4-209ENST00000559222 TBX22Q9Y458 520 aa27.48■■□□□ 1.99
CASC4-209ENST00000559222 ADGRF5Q8IZF2 1346 aa27.47■■□□□ 1.99
CASC4-209ENST00000559222 ALKQ9UM73 1620 aa27.47■■□□□ 1.99
CASC4-209ENST00000559222 XRN1Q8IZH2 1706 aaKnown RBP27.47■■□□□ 1.99
CASC4-209ENST00000559222 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
CASC4-209ENST00000559222 KCNA6P17658 529 aa27.46■■□□□ 1.99
CASC4-209ENST00000559222 METP08581 1390 aa27.46■■□□□ 1.99
CASC4-209ENST00000559222 RBM33Q96EV2 1170 aaKnown RBP27.44■■□□□ 1.98
CASC4-209ENST00000559222 NKTRP30414 1462 aaKnown RBP27.44■■□□□ 1.98
CASC4-209ENST00000559222 VGFO15240 615 aaPredicted RBP27.42■■□□□ 1.98
CASC4-209ENST00000559222 ASXL1Q8IXJ9 1541 aa27.41■■□□□ 1.98
CASC4-209ENST00000559222 MYOM2P54296 1465 aa27.4■■□□□ 1.98
CASC4-209ENST00000559222 PIK3C2GO75747 1445 aa27.39■■□□□ 1.97
CASC4-209ENST00000559222 NRXN1Q9ULB1 1477 aa27.38■■□□□ 1.97
CASC4-209ENST00000559222 TMEM94Q12767 1356 aa27.38■■□□□ 1.97
CASC4-209ENST00000559222 PIK3R4Q99570 1358 aa27.38■■□□□ 1.97
CASC4-209ENST00000559222 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
CASC4-209ENST00000559222 PROSER2Q86WR7 435 aaPredicted RBP27.35■■□□□ 1.97
CASC4-209ENST00000559222 AMOTL2Q9Y2J4 779 aa27.34■■□□□ 1.97
CASC4-209ENST00000559222 SIN3AQ96ST3 1273 aa27.33■■□□□ 1.97
CASC4-209ENST00000559222 UBAP1LF5GYI3 381 aa27.32■■□□□ 1.96
CASC4-209ENST00000559222 KDM2AQ9Y2K7 1162 aa27.29■■□□□ 1.96
CASC4-209ENST00000559222 DISP3Q9P2K9 1392 aa27.29■■□□□ 1.96
CASC4-209ENST00000559222 LAMC1P11047 1609 aa27.29■■□□□ 1.96
CASC4-209ENST00000559222 ILDR2Q71H61 639 aa27.28■■□□□ 1.96
CASC4-209ENST00000559222 DCAF11Q8TEB1 546 aa27.28■■□□□ 1.96
CASC4-209ENST00000559222 NALCNQ8IZF0 1738 aa27.27■■□□□ 1.96
CASC4-209ENST00000559222 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.26■■□□□ 1.95
CASC4-209ENST00000559222 KNDC1Q76NI1 1749 aa27.25■■□□□ 1.95
CASC4-209ENST00000559222 SOCS7O14512 581 aa27.25■■□□□ 1.95
CASC4-209ENST00000559222 CFAP70Q5T0N1 1121 aa27.25■■□□□ 1.95
CASC4-209ENST00000559222 TMEM132EQ6IEE7 984 aa27.25■■□□□ 1.95
CASC4-209ENST00000559222 ROBO2Q9HCK4 1378 aa27.24■■□□□ 1.95
CASC4-209ENST00000559222 NEUROD1Q13562 356 aa27.22■■□□□ 1.95
CASC4-209ENST00000559222 PTCH1Q13635 1447 aa27.22■■□□□ 1.95
CASC4-209ENST00000559222 PRAG1Q86YV5 1406 aa27.22■■□□□ 1.95
CASC4-209ENST00000559222 PIP4K2BP78356 416 aa27.21■■□□□ 1.95
CASC4-209ENST00000559222 C14orf93Q9H972 538 aaKnown RBP27.21■■□□□ 1.95
CASC4-209ENST00000559222 ADGRB1O14514 1584 aa27.21■■□□□ 1.95
CASC4-209ENST00000559222 TOM1O60784 492 aa27.18■■□□□ 1.94
CASC4-209ENST00000559222 MSH6P52701 1360 aa27.18■■□□□ 1.94
CASC4-209ENST00000559222 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
CASC4-209ENST00000559222 YTHDC2Q9H6S0 1430 aaKnown RBP27.17■■□□□ 1.94
CASC4-209ENST00000559222 STK26Q9P289 416 aa27.17■■□□□ 1.94
CASC4-209ENST00000559222 LRPPRCP42704 1394 aaKnown RBP27.17■■□□□ 1.94
CASC4-209ENST00000559222 TECPR2O15040 1411 aa27.16■■□□□ 1.94
CASC4-209ENST00000559222 NCOA3Q9Y6Q9 1424 aa27.16■■□□□ 1.94
CASC4-209ENST00000559222 L3MBTL2Q969R5 705 aa27.16■■□□□ 1.94
CASC4-209ENST00000559222 C14orf37Q86TY3 774 aa27.14■■□□□ 1.94
CASC4-209ENST00000559222 ADGRL3Q9HAR2 1447 aa27.14■■□□□ 1.93
CASC4-209ENST00000559222 PLEKHH1Q9ULM0 1364 aa27.13■■□□□ 1.93
CASC4-209ENST00000559222 ROBO1Q9Y6N7 1651 aa27.13■■□□□ 1.93
CASC4-209ENST00000559222 KIAA1210Q9ULL0 1709 aa27.12■■□□□ 1.93
CASC4-209ENST00000559222 ABCC11Q96J66 1382 aa27.1■■□□□ 1.93
CASC4-209ENST00000559222 WAPLQ7Z5K2 1190 aa27.09■■□□□ 1.93
CASC4-209ENST00000559222 C19orf44Q9H6X5 657 aa27.08■■□□□ 1.93
CASC4-209ENST00000559222 ARHGEF28Q8N1W1 1705 aaKnown RBP27.07■■□□□ 1.92
CASC4-209ENST00000559222 STAC3Q96MF2 364 aa27.07■■□□□ 1.92
CASC4-209ENST00000559222 TRPM1Q7Z4N2 1603 aa27.07■■□□□ 1.92
CASC4-209ENST00000559222 DCCP43146 1447 aa27.06■■□□□ 1.92
CASC4-209ENST00000559222 DLC1Q96QB1 1528 aa27.05■■□□□ 1.92
CASC4-209ENST00000559222 MST1RQ04912 1400 aa27.04■■□□□ 1.92
CASC4-209ENST00000559222 HSPA1LP34931 641 aa27.03■■□□□ 1.92
CASC4-209ENST00000559222 CDC42BPGQ6DT37 1551 aa27.02■■□□□ 1.92
CASC4-209ENST00000559222 NBPF1Q3BBV0 1214 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms