RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TET3O43151 1660 aa21.93■■□□□ 1.1
SPG11-215ENST00000559193 NBR1Q14596 966 aa21.93■■□□□ 1.1
SPG11-215ENST00000559193 MYOM1P52179 1685 aa21.92■■□□□ 1.1
SPG11-215ENST00000559193 ZBTB47Q9UFB7 747 aaPredicted RBP21.92■■□□□ 1.1
SPG11-215ENST00000559193 PLEKHH1Q9ULM0 1364 aa21.91■■□□□ 1.1
SPG11-215ENST00000559193 PDE4AP27815 886 aa21.91■■□□□ 1.1
SPG11-215ENST00000559193 ASXL1Q8IXJ9 1541 aa21.91■■□□□ 1.1
SPG11-215ENST00000559193 MS4A1P11836 297 aa21.91■■□□□ 1.1
SPG11-215ENST00000559193 STAC3Q96MF2 364 aa21.9■■□□□ 1.1
SPG11-215ENST00000559193 VWDEQ8N2E2 1590 aa21.9■■□□□ 1.1
SPG11-215ENST00000559193 DEKP35659 375 aaKnown RBP21.89■■□□□ 1.09
SPG11-215ENST00000559193 CDCA8Q53HL2 280 aa21.89■■□□□ 1.09
SPG11-215ENST00000559193 BACH2Q9BYV9 841 aa21.89■■□□□ 1.09
SPG11-215ENST00000559193 INO80Q9ULG1 1556 aaPredicted RBP21.88■■□□□ 1.09
SPG11-215ENST00000559193 PIK3C2GO75747 1445 aa21.88■■□□□ 1.09
SPG11-215ENST00000559193 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
SPG11-215ENST00000559193 ATP7AQ04656 1500 aa21.87■■□□□ 1.09
SPG11-215ENST00000559193 ZNF521Q96K83 1311 aa21.87■■□□□ 1.09
SPG11-215ENST00000559193 KIAA1210Q9ULL0 1709 aa21.86■■□□□ 1.09
SPG11-215ENST00000559193 C20orf194Q5TEA3 1177 aa21.86■■□□□ 1.09
SPG11-215ENST00000559193 NPM2Q86SE8 214 aaKnown RBP21.86■■□□□ 1.09
SPG11-215ENST00000559193 DUSP27Q5VZP5 1158 aa21.86■■□□□ 1.09
SPG11-215ENST00000559193 EIF3AQ14152 1382 aaKnown RBP21.85■■□□□ 1.09
SPG11-215ENST00000559193 NPC1L1Q9UHC9 1359 aa21.85■■□□□ 1.09
SPG11-215ENST00000559193 ABCA9Q8IUA7 1624 aa21.84■■□□□ 1.09
SPG11-215ENST00000559193 NEURL4Q96JN8 1562 aa21.84■■□□□ 1.09
SPG11-215ENST00000559193 KANK1Q14678 1352 aa21.84■■□□□ 1.09
SPG11-215ENST00000559193 KDM5AP29375 1690 aaKnown RBP21.83■■□□□ 1.09
SPG11-215ENST00000559193 SKAP1Q86WV1 359 aa21.82■■□□□ 1.08
SPG11-215ENST00000559193 FANCAO15360 1455 aa21.82■■□□□ 1.08
SPG11-215ENST00000559193 MROH1Q8NDA8 1641 aa21.82■■□□□ 1.08
SPG11-215ENST00000559193 UGGT1Q9NYU2 1555 aa21.81■■□□□ 1.08
SPG11-215ENST00000559193 ABCA6Q8N139 1617 aa21.81■■□□□ 1.08
SPG11-215ENST00000559193 MAP3K4Q9Y6R4 1608 aa21.8■■□□□ 1.08
SPG11-215ENST00000559193 MYOM2P54296 1465 aa21.8■■□□□ 1.08
SPG11-215ENST00000559193 GOLGA2Q08379 1002 aa21.8■■□□□ 1.08
SPG11-215ENST00000559193 KDM2BQ8NHM5 1336 aa21.79■■□□□ 1.08
SPG11-215ENST00000559193 KIF3BO15066 747 aa21.79■■□□□ 1.08
SPG11-215ENST00000559193 ERVK-7P63135 1459 aa21.79■■□□□ 1.08
SPG11-215ENST00000559193 CFAP70Q5T0N1 1121 aa21.77■■□□□ 1.08
SPG11-215ENST00000559193 SLFN5Q08AF3 891 aa21.76■■□□□ 1.07
SPG11-215ENST00000559193 ADGRL1O94910 1474 aa21.76■■□□□ 1.07
SPG11-215ENST00000559193 ADGRF5Q8IZF2 1346 aa21.75■■□□□ 1.07
SPG11-215ENST00000559193 CCDC146Q8IYE0 955 aa21.75■■□□□ 1.07
SPG11-215ENST00000559193 EFCAB6Q5THR3 1501 aa21.74■■□□□ 1.07
SPG11-215ENST00000559193 IFT172Q9UG01 1749 aa21.74■■□□□ 1.07
SPG11-215ENST00000559193 TRMT2AQ8IZ69 625 aaKnown RBP21.73■■□□□ 1.07
SPG11-215ENST00000559193 MROH2AA6NES4 1674 aa21.72■■□□□ 1.07
SPG11-215ENST00000559193 RTL5Q5HYW3 569 aaPredicted RBP21.72■■□□□ 1.07
SPG11-215ENST00000559193 CENPQQ7L2Z9 268 aaPredicted RBP21.71■■□□□ 1.07
SPG11-215ENST00000559193 KIF1BO60333 1816 aa21.71■■□□□ 1.07
SPG11-215ENST00000559193 CARD14Q9BXL6 1004 aa21.71■■□□□ 1.07
SPG11-215ENST00000559193 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
SPG11-215ENST00000559193 NRXN1Q9ULB1 1477 aa21.7■■□□□ 1.07
SPG11-215ENST00000559193 PPRC1Q5VV67 1664 aaKnown RBP21.7■■□□□ 1.06
SPG11-215ENST00000559193 MYO3AQ8NEV4 1616 aa21.7■■□□□ 1.06
SPG11-215ENST00000559193 APAF1O14727 1248 aa21.7■■□□□ 1.06
SPG11-215ENST00000559193 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.7■■□□□ 1.06
SPG11-215ENST00000559193 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
SPG11-215ENST00000559193 SLC24A1O60721 1099 aa21.68■■□□□ 1.06
SPG11-215ENST00000559193 KIDINS220Q9ULH0 1771 aa21.67■■□□□ 1.06
SPG11-215ENST00000559193 SBNO2Q9Y2G9 1366 aa21.66■■□□□ 1.06
SPG11-215ENST00000559193 LMTK2Q8IWU2 1503 aa21.66■■□□□ 1.06
SPG11-215ENST00000559193 LAS1LQ9Y4W2 734 aaKnown RBP21.65■■□□□ 1.06
SPG11-215ENST00000559193 ADGRB3O60242 1522 aa21.65■■□□□ 1.06
SPG11-215ENST00000559193 NOS1P29475 1434 aa21.63■■□□□ 1.05
SPG11-215ENST00000559193 DMRT2Q9Y5R5 561 aa21.63■■□□□ 1.05
SPG11-215ENST00000559193 E9PSI1 815 aa21.62■■□□□ 1.05
SPG11-215ENST00000559193 SETBP1Q9Y6X0 1596 aa21.62■■□□□ 1.05
SPG11-215ENST00000559193 DDRGK1Q96HY6 314 aa21.62■■□□□ 1.05
SPG11-215ENST00000559193 ASXL2Q76L83 1435 aa21.62■■□□□ 1.05
SPG11-215ENST00000559193 BCAR3O75815 825 aa21.61■■□□□ 1.05
SPG11-215ENST00000559193 POLR3AO14802 1390 aaPredicted RBP21.61■■□□□ 1.05
SPG11-215ENST00000559193 CENPJQ9HC77 1338 aaPredicted RBP21.6■■□□□ 1.05
SPG11-215ENST00000559193 C8orf34Q49A92 452 aa21.59■■□□□ 1.05
SPG11-215ENST00000559193 NGEFQ8N5V2 710 aa21.58■■□□□ 1.05
SPG11-215ENST00000559193 ZC3H13Q5T200 1668 aaKnown RBP21.58■■□□□ 1.05
SPG11-215ENST00000559193 ZNF518AQ6AHZ1 1483 aa21.58■■□□□ 1.05
SPG11-215ENST00000559193 FAM161AQ3B820 660 aa21.58■■□□□ 1.04
SPG11-215ENST00000559193 SHPRHQ149N8 1683 aa21.57■■□□□ 1.04
SPG11-215ENST00000559193 NEFMP07197 916 aa21.57■■□□□ 1.04
SPG11-215ENST00000559193 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
SPG11-215ENST00000559193 USP35Q9P2H5 1018 aa21.56■■□□□ 1.04
SPG11-215ENST00000559193 PPM1GO15355 546 aaPredicted RBP21.55■■□□□ 1.04
SPG11-215ENST00000559193 ADGRB1O14514 1584 aa21.55■■□□□ 1.04
SPG11-215ENST00000559193 QRICH2Q9H0J4 1663 aa21.55■■□□□ 1.04
SPG11-215ENST00000559193 PPLO60437 1756 aa21.55■■□□□ 1.04
SPG11-215ENST00000559193 NPATQ14207 1427 aa21.55■■□□□ 1.04
SPG11-215ENST00000559193 FRMPD1Q5SYB0 1578 aa21.54■■□□□ 1.04
SPG11-215ENST00000559193 CHGAP10645 457 aaKnown RBP21.53■■□□□ 1.04
SPG11-215ENST00000559193 WWC1Q8IX03 1113 aa21.53■■□□□ 1.04
SPG11-215ENST00000559193 TRAK1Q9UPV9 953 aa21.53■■□□□ 1.04
SPG11-215ENST00000559193 RGS3P49796 1198 aa21.52■■□□□ 1.04
SPG11-215ENST00000559193 C14orf93Q9H972 538 aaKnown RBP21.52■■□□□ 1.04
SPG11-215ENST00000559193 MORC1Q86VD1 984 aa21.51■■□□□ 1.03
SPG11-215ENST00000559193 IQSEC2Q5JU85 1478 aa21.51■■□□□ 1.03
SPG11-215ENST00000559193 SLC12A5Q9H2X9 1139 aa21.5■■□□□ 1.03
SPG11-215ENST00000559193 USP32Q8NFA0 1604 aa21.5■■□□□ 1.03
SPG11-215ENST00000559193 NINLQ9Y2I6 1382 aa21.49■■□□□ 1.03
SPG11-215ENST00000559193 POGZQ7Z3K3 1410 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms