RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 PRDM15P57071 1507 aaPredicted RBP20.59■□□□□ 0.89
HMBOX1-212ENST00000558662 TBC1D2Q9BYX2 928 aa20.59■□□□□ 0.89
HMBOX1-212ENST00000558662 PMFBP1Q8TBY8 1022 aa20.58■□□□□ 0.89
HMBOX1-212ENST00000558662 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.57■□□□□ 0.88
HMBOX1-212ENST00000558662 PANK2Q9BZ23 570 aa20.57■□□□□ 0.88
HMBOX1-212ENST00000558662 PLEKHH1Q9ULM0 1364 aa20.56■□□□□ 0.88
HMBOX1-212ENST00000558662 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
HMBOX1-212ENST00000558662 ADCY10Q96PN6 1610 aa20.55■□□□□ 0.88
HMBOX1-212ENST00000558662 PIK3C2GO75747 1445 aa20.55■□□□□ 0.88
HMBOX1-212ENST00000558662 PTPRGP23470 1445 aa20.55■□□□□ 0.88
HMBOX1-212ENST00000558662 PRAG1Q86YV5 1406 aa20.55■□□□□ 0.88
HMBOX1-212ENST00000558662 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
HMBOX1-212ENST00000558662 CCDC173Q0VFZ6 552 aa20.54■□□□□ 0.88
HMBOX1-212ENST00000558662 CIZ1Q9ULV3 898 aaPredicted RBP20.54■□□□□ 0.88
HMBOX1-212ENST00000558662 ANKRD50Q9ULJ7 1429 aa20.54■□□□□ 0.88
HMBOX1-212ENST00000558662 HS1BP3Q53T59 392 aa20.53■□□□□ 0.88
HMBOX1-212ENST00000558662 CLUAP1Q96AJ1 413 aa20.53■□□□□ 0.88
HMBOX1-212ENST00000558662 NUP160Q12769 1436 aa20.53■□□□□ 0.88
HMBOX1-212ENST00000558662 E9PSI1 815 aa20.52■□□□□ 0.88
HMBOX1-212ENST00000558662 OFD1O75665 1012 aa20.52■□□□□ 0.88
HMBOX1-212ENST00000558662 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
HMBOX1-212ENST00000558662 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
HMBOX1-212ENST00000558662 IBTKQ9P2D0 1353 aaPredicted RBP20.51■□□□□ 0.87
HMBOX1-212ENST00000558662 PPP1R9BQ96SB3 815 aa20.51■□□□□ 0.87
HMBOX1-212ENST00000558662 PRDM4Q9UKN5 801 aa20.51■□□□□ 0.87
HMBOX1-212ENST00000558662 ABCC10Q5T3U5 1492 aa20.5■□□□□ 0.87
HMBOX1-212ENST00000558662 NCOA3Q9Y6Q9 1424 aa20.5■□□□□ 0.87
HMBOX1-212ENST00000558662 SMAP1Q8IYB5 467 aaPredicted RBP20.5■□□□□ 0.87
HMBOX1-212ENST00000558662 ZSCAN30Q86W11 494 aa20.49■□□□□ 0.87
HMBOX1-212ENST00000558662 ERBINQ96RT1 1412 aa20.49■□□□□ 0.87
HMBOX1-212ENST00000558662 SEC24BO95487 1268 aa20.49■□□□□ 0.87
HMBOX1-212ENST00000558662 ERBB4Q15303 1308 aa20.48■□□□□ 0.87
HMBOX1-212ENST00000558662 IGHDP01880 384 aa20.48■□□□□ 0.87
HMBOX1-212ENST00000558662 KIAA1211Q6ZU35 1233 aa20.48■□□□□ 0.87
HMBOX1-212ENST00000558662 ANP32BQ92688 251 aaKnown RBP20.48■□□□□ 0.87
HMBOX1-212ENST00000558662 GBP4Q96PP9 640 aa20.47■□□□□ 0.87
HMBOX1-212ENST00000558662 TMF1P82094 1093 aa20.46■□□□□ 0.87
HMBOX1-212ENST00000558662 TROQ12816 1431 aaPredicted RBP20.45■□□□□ 0.86
HMBOX1-212ENST00000558662 GRIN2AQ12879 1464 aa20.45■□□□□ 0.86
HMBOX1-212ENST00000558662 PANK3Q9H999 370 aa20.44■□□□□ 0.86
HMBOX1-212ENST00000558662 RAPGEF6Q8TEU7 1601 aa20.44■□□□□ 0.86
HMBOX1-212ENST00000558662 SYNJ2O15056 1496 aa20.44■□□□□ 0.86
HMBOX1-212ENST00000558662 SYNMO15061 1565 aa20.44■□□□□ 0.86
HMBOX1-212ENST00000558662 NCLP19338 710 aaKnown RBP20.44■□□□□ 0.86
HMBOX1-212ENST00000558662 CC2D1BQ5T0F9 858 aaKnown RBP20.44■□□□□ 0.86
HMBOX1-212ENST00000558662 GZF1Q9H116 711 aaPredicted RBP20.44■□□□□ 0.86
HMBOX1-212ENST00000558662 NUP155O75694 1391 aa20.44■□□□□ 0.86
HMBOX1-212ENST00000558662 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
HMBOX1-212ENST00000558662 SNX21Q969T3 373 aa20.42■□□□□ 0.86
HMBOX1-212ENST00000558662 TESK2Q96S53 571 aa20.42■□□□□ 0.86
HMBOX1-212ENST00000558662 CCDC141Q6ZP82 1450 aa20.42■□□□□ 0.86
HMBOX1-212ENST00000558662 PPP2R1AP30153 589 aa20.41■□□□□ 0.86
HMBOX1-212ENST00000558662 DDIT3P35638 169 aa20.41■□□□□ 0.86
HMBOX1-212ENST00000558662 MSNP26038 577 aaKnown RBP20.41■□□□□ 0.86
HMBOX1-212ENST00000558662 RTEL1-TNFRSF6BF6WH68 1400 aa20.41■□□□□ 0.86
HMBOX1-212ENST00000558662 RNF17Q9BXT8 1623 aaKnown RBP20.4■□□□□ 0.86
HMBOX1-212ENST00000558662 GPATCH8Q9UKJ3 1502 aaKnown RBP20.4■□□□□ 0.86
HMBOX1-212ENST00000558662 RWDD1Q9H446 243 aaPredicted RBP20.4■□□□□ 0.86
HMBOX1-212ENST00000558662 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.86
HMBOX1-212ENST00000558662 NUP153P49790 1475 aaKnown RBP20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 ZNF644Q9H582 1327 aaPredicted RBP20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 ASXL1Q8IXJ9 1541 aa20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 DISP3Q9P2K9 1392 aa20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 MCM5P33992 734 aa20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 CSPP1Q1MSJ5 1256 aa20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 CDCA8Q53HL2 280 aa20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 UTP14CQ5TAP6 766 aaKnown RBP20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 C22orf23Q9BZE7 217 aa20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 CFDP1Q9UEE9 299 aaPredicted RBP20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 SHROOM2Q13796 1616 aa20.39■□□□□ 0.85
HMBOX1-212ENST00000558662 SMC5Q8IY18 1101 aa20.38■□□□□ 0.85
HMBOX1-212ENST00000558662 DYNC1I1O14576 645 aa20.37■□□□□ 0.85
HMBOX1-212ENST00000558662 ZNF500O60304 480 aaPredicted RBP20.36■□□□□ 0.85
HMBOX1-212ENST00000558662 KNSTRNQ9Y448 316 aa20.36■□□□□ 0.85
HMBOX1-212ENST00000558662 WDR7Q9Y4E6 1490 aa20.36■□□□□ 0.85
HMBOX1-212ENST00000558662 CLEC17AQ6ZS10 378 aa20.36■□□□□ 0.85
HMBOX1-212ENST00000558662 ARXQ96QS3 562 aa20.36■□□□□ 0.85
HMBOX1-212ENST00000558662 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
HMBOX1-212ENST00000558662 KIAA0556O60303 1618 aa20.35■□□□□ 0.85
HMBOX1-212ENST00000558662 RBM10P98175 930 aaKnown RBP20.35■□□□□ 0.85
HMBOX1-212ENST00000558662 CDC42BPAQ5VT25 1732 aa20.35■□□□□ 0.85
HMBOX1-212ENST00000558662 GOLGA6L22H0YM25 854 aa20.34■□□□□ 0.85
HMBOX1-212ENST00000558662 ARHGEF5Q12774 1597 aa20.33■□□□□ 0.84
HMBOX1-212ENST00000558662 C9orf84Q5VXU9 1444 aa20.33■□□□□ 0.84
HMBOX1-212ENST00000558662 BCAR3O75815 825 aa20.33■□□□□ 0.84
HMBOX1-212ENST00000558662 RIPK4P57078 832 aa20.33■□□□□ 0.84
HMBOX1-212ENST00000558662 RAB3GAP1Q15042 981 aa20.33■□□□□ 0.84
HMBOX1-212ENST00000558662 MYO5CQ9NQX4 1742 aa20.32■□□□□ 0.84
HMBOX1-212ENST00000558662 CANXP27824 592 aaKnown RBP20.32■□□□□ 0.84
HMBOX1-212ENST00000558662 NASPP49321 788 aaPredicted RBP20.32■□□□□ 0.84
HMBOX1-212ENST00000558662 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
HMBOX1-212ENST00000558662 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
HMBOX1-212ENST00000558662 FAM135AQ9P2D6 1515 aa20.31■□□□□ 0.84
HMBOX1-212ENST00000558662 RBM25P49756 843 aaKnown RBP20.31■□□□□ 0.84
HMBOX1-212ENST00000558662 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
HMBOX1-212ENST00000558662 MAGI2Q86UL8 1455 aa20.3■□□□□ 0.84
HMBOX1-212ENST00000558662 SLC24A1O60721 1099 aa20.29■□□□□ 0.84
HMBOX1-212ENST00000558662 NOL7Q9UMY1 257 aaKnown RBP20.29■□□□□ 0.84
HMBOX1-212ENST00000558662 A2MP01023 1474 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms