RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PPP1R15AO75807 674 aaPredicted RBP23.44■■□□□ 1.34
RABGGTA-206ENST00000558649 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
RABGGTA-206ENST00000558649 NUTM2DQ5VT03 806 aaPredicted RBP23.44■■□□□ 1.34
RABGGTA-206ENST00000558649 LTBP4Q8N2S1 1624 aa23.42■■□□□ 1.34
RABGGTA-206ENST00000558649 BCANQ96GW7 911 aa23.42■■□□□ 1.34
RABGGTA-206ENST00000558649 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
RABGGTA-206ENST00000558649 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
RABGGTA-206ENST00000558649 HRCP23327 699 aa23.4■■□□□ 1.34
RABGGTA-206ENST00000558649 HDGFP51858 240 aaKnown RBP23.39■■□□□ 1.33
RABGGTA-206ENST00000558649 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.37■■□□□ 1.33
RABGGTA-206ENST00000558649 CERKQ8TCT0 537 aa23.37■■□□□ 1.33
RABGGTA-206ENST00000558649 NEXMIFQ5QGS0 1516 aa23.36■■□□□ 1.33
RABGGTA-206ENST00000558649 PLEKHG1Q9ULL1 1385 aa23.36■■□□□ 1.33
RABGGTA-206ENST00000558649 STRCP1A6NGW2 1772 aa23.35■■□□□ 1.33
RABGGTA-206ENST00000558649 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
RABGGTA-206ENST00000558649 PPLO60437 1756 aa23.32■■□□□ 1.32
RABGGTA-206ENST00000558649 CPS1P31327 1500 aa23.31■■□□□ 1.32
RABGGTA-206ENST00000558649 RGL3Q3MIN7 710 aa23.29■■□□□ 1.32
RABGGTA-206ENST00000558649 NRXN3Q9Y4C0 1643 aa23.28■■□□□ 1.32
RABGGTA-206ENST00000558649 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
RABGGTA-206ENST00000558649 IFT172Q9UG01 1749 aa23.27■■□□□ 1.32
RABGGTA-206ENST00000558649 DIP2AQ14689 1571 aa23.27■■□□□ 1.32
RABGGTA-206ENST00000558649 SPATA31E1Q6ZUB1 1445 aa23.26■■□□□ 1.31
RABGGTA-206ENST00000558649 ADAMTS13Q76LX8 1427 aa23.25■■□□□ 1.31
RABGGTA-206ENST00000558649 SETBP1Q9Y6X0 1596 aa23.25■■□□□ 1.31
RABGGTA-206ENST00000558649 RPGRIP1LQ68CZ1 1315 aa23.23■■□□□ 1.31
RABGGTA-206ENST00000558649 NWD1Q149M9 1564 aa23.23■■□□□ 1.31
RABGGTA-206ENST00000558649 CHD2O14647 1828 aaKnown RBP23.22■■□□□ 1.31
RABGGTA-206ENST00000558649 IQSEC2Q5JU85 1478 aa23.22■■□□□ 1.31
RABGGTA-206ENST00000558649 VGFO15240 615 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-206ENST00000558649 LRRC7Q96NW7 1537 aa23.21■■□□□ 1.31
RABGGTA-206ENST00000558649 FBXO41Q8TF61 875 aa23.2■■□□□ 1.3
RABGGTA-206ENST00000558649 TBX22Q9Y458 520 aa23.2■■□□□ 1.3
RABGGTA-206ENST00000558649 ILDR1Q86SU0 546 aaPredicted RBP23.19■■□□□ 1.3
RABGGTA-206ENST00000558649 XIRP1Q702N8 1843 aaKnown RBP23.18■■□□□ 1.3
RABGGTA-206ENST00000558649 KCNA6P17658 529 aa23.18■■□□□ 1.3
RABGGTA-206ENST00000558649 NKTRP30414 1462 aaKnown RBP23.16■■□□□ 1.3
RABGGTA-206ENST00000558649 SETD1AO15047 1707 aaKnown RBP23.16■■□□□ 1.3
RABGGTA-206ENST00000558649 ALKQ9UM73 1620 aa23.15■■□□□ 1.3
RABGGTA-206ENST00000558649 ADGRF5Q8IZF2 1346 aa23.14■■□□□ 1.3
RABGGTA-206ENST00000558649 PROSER2Q86WR7 435 aaPredicted RBP23.13■■□□□ 1.29
RABGGTA-206ENST00000558649 RBM33Q96EV2 1170 aaKnown RBP23.13■■□□□ 1.29
RABGGTA-206ENST00000558649 METP08581 1390 aa23.13■■□□□ 1.29
RABGGTA-206ENST00000558649 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
RABGGTA-206ENST00000558649 PTPRUQ92729 1446 aa23.12■■□□□ 1.29
RABGGTA-206ENST00000558649 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
RABGGTA-206ENST00000558649 PIK3R4Q99570 1358 aa23.12■■□□□ 1.29
RABGGTA-206ENST00000558649 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
RABGGTA-206ENST00000558649 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
RABGGTA-206ENST00000558649 TMEM94Q12767 1356 aa23.11■■□□□ 1.29
RABGGTA-206ENST00000558649 MYOM2P54296 1465 aa23.1■■□□□ 1.29
RABGGTA-206ENST00000558649 AMOTL2Q9Y2J4 779 aa23.09■■□□□ 1.29
RABGGTA-206ENST00000558649 PIK3C2GO75747 1445 aa23.08■■□□□ 1.28
RABGGTA-206ENST00000558649 KDM2AQ9Y2K7 1162 aa23.07■■□□□ 1.28
RABGGTA-206ENST00000558649 DCAF11Q8TEB1 546 aa23.06■■□□□ 1.28
RABGGTA-206ENST00000558649 SCAF1Q9H7N4 1312 aaKnown RBP23.06■■□□□ 1.28
RABGGTA-206ENST00000558649 NRXN1Q9ULB1 1477 aa23.04■■□□□ 1.28
RABGGTA-206ENST00000558649 LAMC1P11047 1609 aa23.04■■□□□ 1.28
RABGGTA-206ENST00000558649 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
RABGGTA-206ENST00000558649 SIN3AQ96ST3 1273 aa23.03■■□□□ 1.28
RABGGTA-206ENST00000558649 TOM1O60784 492 aa23.02■■□□□ 1.28
RABGGTA-206ENST00000558649 PIP4K2BP78356 416 aa23.02■■□□□ 1.28
RABGGTA-206ENST00000558649 NEUROD1Q13562 356 aa23.02■■□□□ 1.28
RABGGTA-206ENST00000558649 ASXL1Q8IXJ9 1541 aa23.02■■□□□ 1.28
RABGGTA-206ENST00000558649 MSH6P52701 1360 aa23■■□□□ 1.27
RABGGTA-206ENST00000558649 TMEM132EQ6IEE7 984 aa22.98■■□□□ 1.27
RABGGTA-206ENST00000558649 CFAP70Q5T0N1 1121 aa22.97■■□□□ 1.27
RABGGTA-206ENST00000558649 STK26Q9P289 416 aa22.97■■□□□ 1.27
RABGGTA-206ENST00000558649 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.96■■□□□ 1.27
RABGGTA-206ENST00000558649 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
RABGGTA-206ENST00000558649 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
RABGGTA-206ENST00000558649 KNDC1Q76NI1 1749 aa22.95■■□□□ 1.26
RABGGTA-206ENST00000558649 C14orf93Q9H972 538 aaKnown RBP22.95■■□□□ 1.26
RABGGTA-206ENST00000558649 ROBO2Q9HCK4 1378 aa22.95■■□□□ 1.26
RABGGTA-206ENST00000558649 NCOA3Q9Y6Q9 1424 aa22.93■■□□□ 1.26
RABGGTA-206ENST00000558649 YTHDC2Q9H6S0 1430 aaKnown RBP22.92■■□□□ 1.26
RABGGTA-206ENST00000558649 LRPPRCP42704 1394 aaKnown RBP22.91■■□□□ 1.26
RABGGTA-206ENST00000558649 STAC3Q96MF2 364 aa22.91■■□□□ 1.26
RABGGTA-206ENST00000558649 L3MBTL2Q969R5 705 aa22.9■■□□□ 1.26
RABGGTA-206ENST00000558649 PRAG1Q86YV5 1406 aa22.9■■□□□ 1.26
RABGGTA-206ENST00000558649 ADGRL3Q9HAR2 1447 aa22.89■■□□□ 1.25
RABGGTA-206ENST00000558649 ROBO1Q9Y6N7 1651 aa22.88■■□□□ 1.25
RABGGTA-206ENST00000558649 ATF3P18847 181 aa22.88■■□□□ 1.25
RABGGTA-206ENST00000558649 C19orf44Q9H6X5 657 aa22.88■■□□□ 1.25
RABGGTA-206ENST00000558649 ADGRB1O14514 1584 aa22.88■■□□□ 1.25
RABGGTA-206ENST00000558649 TECPR2O15040 1411 aa22.87■■□□□ 1.25
RABGGTA-206ENST00000558649 ABCC11Q96J66 1382 aa22.86■■□□□ 1.25
RABGGTA-206ENST00000558649 KIAA1210Q9ULL0 1709 aa22.85■■□□□ 1.25
RABGGTA-206ENST00000558649 WAPLQ7Z5K2 1190 aa22.84■■□□□ 1.25
RABGGTA-206ENST00000558649 CADPS2Q86UW7 1296 aa22.84■■□□□ 1.25
RABGGTA-206ENST00000558649 TONSLQ96HA7 1378 aa22.84■■□□□ 1.25
RABGGTA-206ENST00000558649 PLEKHH1Q9ULM0 1364 aa22.84■■□□□ 1.25
RABGGTA-206ENST00000558649 DCCP43146 1447 aa22.83■■□□□ 1.25
RABGGTA-206ENST00000558649 SLAIN2Q9P270 581 aa22.83■■□□□ 1.25
RABGGTA-206ENST00000558649 HSPA1LP34931 641 aa22.81■■□□□ 1.24
RABGGTA-206ENST00000558649 TRAK1Q9UPV9 953 aa22.81■■□□□ 1.24
RABGGTA-206ENST00000558649 SAFB2Q14151 953 aaKnown RBP eCLIP22.8■■□□□ 1.24
RABGGTA-206ENST00000558649 TRPM1Q7Z4N2 1603 aa22.79■■□□□ 1.24
RABGGTA-206ENST00000558649 DLC1Q96QB1 1528 aa22.79■■□□□ 1.24
RABGGTA-206ENST00000558649 FAM135BQ49AJ0 1406 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms