RNA–Protein interactions for RNA: ENST00000558388.6

AC012236.1-202, humanhuman

TSL 2 BASIC

Gene AC012236.1, Length 1,024 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012236.1-202ENST00000558388 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
AC012236.1-202ENST00000558388 LTKP29376 864 aa17.43■□□□□ 0.38
AC012236.1-202ENST00000558388 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
AC012236.1-202ENST00000558388 IQSEC2Q5JU85 1478 aa17.42■□□□□ 0.38
AC012236.1-202ENST00000558388 IDI1Q13907 227 aa17.41■□□□□ 0.38
AC012236.1-202ENST00000558388 UBAP1LF5GYI3 381 aa17.4■□□□□ 0.38
AC012236.1-202ENST00000558388 ARHGAP23Q9P227 1491 aa17.39■□□□□ 0.37
AC012236.1-202ENST00000558388 TXNDC2Q86VQ3 553 aa17.39■□□□□ 0.37
AC012236.1-202ENST00000558388 MYO5BQ9ULV0 1848 aa17.39■□□□□ 0.37
AC012236.1-202ENST00000558388 UNC13BO14795 1591 aa17.39■□□□□ 0.37
AC012236.1-202ENST00000558388 NOS1P29475 1434 aa17.38■□□□□ 0.37
AC012236.1-202ENST00000558388 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
AC012236.1-202ENST00000558388 SLIT1O75093 1534 aa17.37■□□□□ 0.37
AC012236.1-202ENST00000558388 TET3O43151 1660 aa17.37■□□□□ 0.37
AC012236.1-202ENST00000558388 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
AC012236.1-202ENST00000558388 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
AC012236.1-202ENST00000558388 CPS1P31327 1500 aa17.36■□□□□ 0.37
AC012236.1-202ENST00000558388 E9PCH4 1651 aa17.36■□□□□ 0.37
AC012236.1-202ENST00000558388 NUP155O75694 1391 aa17.35■□□□□ 0.37
AC012236.1-202ENST00000558388 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
AC012236.1-202ENST00000558388 TMEM2Q9UHN6 1383 aa17.34■□□□□ 0.37
AC012236.1-202ENST00000558388 ALKQ9UM73 1620 aa17.32■□□□□ 0.36
AC012236.1-202ENST00000558388 ADGRB3O60242 1522 aa17.32■□□□□ 0.36
AC012236.1-202ENST00000558388 PIP4K2BP78356 416 aa17.32■□□□□ 0.36
AC012236.1-202ENST00000558388 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
AC012236.1-202ENST00000558388 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
AC012236.1-202ENST00000558388 XIRP1Q702N8 1843 aaKnown RBP17.31■□□□□ 0.36
AC012236.1-202ENST00000558388 KDM5AP29375 1690 aaKnown RBP17.3■□□□□ 0.36
AC012236.1-202ENST00000558388 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
AC012236.1-202ENST00000558388 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
AC012236.1-202ENST00000558388 RPRD2Q5VT52 1461 aaKnown RBP17.28■□□□□ 0.36
AC012236.1-202ENST00000558388 TMEM131LA2VDJ0 1609 aa17.28■□□□□ 0.36
AC012236.1-202ENST00000558388 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
AC012236.1-202ENST00000558388 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.36
AC012236.1-202ENST00000558388 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
AC012236.1-202ENST00000558388 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
AC012236.1-202ENST00000558388 HSPA1LP34931 641 aa17.25■□□□□ 0.35
AC012236.1-202ENST00000558388 DISP3Q9P2K9 1392 aa17.25■□□□□ 0.35
AC012236.1-202ENST00000558388 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
AC012236.1-202ENST00000558388 ZFYVE9O95405 1425 aa17.23■□□□□ 0.35
AC012236.1-202ENST00000558388 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
AC012236.1-202ENST00000558388 TOM1O60784 492 aa17.23■□□□□ 0.35
AC012236.1-202ENST00000558388 ILDR2Q71H61 639 aa17.23■□□□□ 0.35
AC012236.1-202ENST00000558388 BCANQ96GW7 911 aa17.22■□□□□ 0.35
AC012236.1-202ENST00000558388 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
AC012236.1-202ENST00000558388 ANKRD30BQ9BXX2 1392 aa17.22■□□□□ 0.35
AC012236.1-202ENST00000558388 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
AC012236.1-202ENST00000558388 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
AC012236.1-202ENST00000558388 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
AC012236.1-202ENST00000558388 CAPN15O75808 1086 aa17.18■□□□□ 0.34
AC012236.1-202ENST00000558388 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
AC012236.1-202ENST00000558388 KCNA6P17658 529 aa17.17■□□□□ 0.34
AC012236.1-202ENST00000558388 CHD2O14647 1828 aaKnown RBP17.17■□□□□ 0.34
AC012236.1-202ENST00000558388 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
AC012236.1-202ENST00000558388 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
AC012236.1-202ENST00000558388 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
AC012236.1-202ENST00000558388 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
AC012236.1-202ENST00000558388 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
AC012236.1-202ENST00000558388 CLTCL1P53675 1640 aa17.14■□□□□ 0.33
AC012236.1-202ENST00000558388 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
AC012236.1-202ENST00000558388 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
AC012236.1-202ENST00000558388 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC012236.1-202ENST00000558388 MED1Q15648 1581 aaPredicted RBP17.09■□□□□ 0.33
AC012236.1-202ENST00000558388 CCDC144AA2RUR9 1427 aa17.08■□□□□ 0.32
AC012236.1-202ENST00000558388 PTPRUQ92729 1446 aa17.08■□□□□ 0.32
AC012236.1-202ENST00000558388 HDGFP51858 240 aaKnown RBP17.08■□□□□ 0.32
AC012236.1-202ENST00000558388 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
AC012236.1-202ENST00000558388 TBX22Q9Y458 520 aa17.08■□□□□ 0.32
AC012236.1-202ENST00000558388 TRPM2O94759 1503 aa17.07■□□□□ 0.32
AC012236.1-202ENST00000558388 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
AC012236.1-202ENST00000558388 KIF1BO60333 1816 aa17.07■□□□□ 0.32
AC012236.1-202ENST00000558388 DSG3P32926 999 aa17.06■□□□□ 0.32
AC012236.1-202ENST00000558388 ROBO1Q9Y6N7 1651 aa17.06■□□□□ 0.32
AC012236.1-202ENST00000558388 NEXMIFQ5QGS0 1516 aa17.05■□□□□ 0.32
AC012236.1-202ENST00000558388 DIP2AQ14689 1571 aa17.02■□□□□ 0.32
AC012236.1-202ENST00000558388 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
AC012236.1-202ENST00000558388 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
AC012236.1-202ENST00000558388 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
AC012236.1-202ENST00000558388 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
AC012236.1-202ENST00000558388 METP08581 1390 aa17.01■□□□□ 0.31
AC012236.1-202ENST00000558388 MSH6P52701 1360 aa17.01■□□□□ 0.31
AC012236.1-202ENST00000558388 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
AC012236.1-202ENST00000558388 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
AC012236.1-202ENST00000558388 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
AC012236.1-202ENST00000558388 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
AC012236.1-202ENST00000558388 PIK3R4Q99570 1358 aa16.96■□□□□ 0.31
AC012236.1-202ENST00000558388 PPLO60437 1756 aa16.96■□□□□ 0.31
AC012236.1-202ENST00000558388 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.3
AC012236.1-202ENST00000558388 PHLPP1O60346 1717 aa16.96■□□□□ 0.3
AC012236.1-202ENST00000558388 SOCS7O14512 581 aa16.94■□□□□ 0.3
AC012236.1-202ENST00000558388 SAMD1Q6SPF0 538 aaPredicted RBP16.94■□□□□ 0.3
AC012236.1-202ENST00000558388 SPATA31E1Q6ZUB1 1445 aa16.93■□□□□ 0.3
AC012236.1-202ENST00000558388 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
AC012236.1-202ENST00000558388 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
AC012236.1-202ENST00000558388 DCAF11Q8TEB1 546 aa16.91■□□□□ 0.3
AC012236.1-202ENST00000558388 C19orf44Q9H6X5 657 aa16.91■□□□□ 0.3
AC012236.1-202ENST00000558388 RGS17Q9UGC6 210 aaPredicted RBP16.91■□□□□ 0.3
AC012236.1-202ENST00000558388 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
AC012236.1-202ENST00000558388 ZNF219Q9P2Y4 722 aaPredicted RBP16.9■□□□□ 0.3
AC012236.1-202ENST00000558388 COL16A1Q07092 1604 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms