RNA–Protein interactions for RNA: ENST00000558388.6

AC012236.1-202, humanhuman

TSL 2 BASIC

Gene AC012236.1, Length 1,024 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012236.1-202ENST00000558388 AEBP2Q6ZN18 517 aaPredicted RBP28.73■■■□□ 2.19
AC012236.1-202ENST00000558388 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
AC012236.1-202ENST00000558388 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
AC012236.1-202ENST00000558388 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
AC012236.1-202ENST00000558388 ABCC9O60706 1549 aa25.05■■□□□ 1.6
AC012236.1-202ENST00000558388 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
AC012236.1-202ENST00000558388 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
AC012236.1-202ENST00000558388 RB1CC1Q8TDY2 1594 aa23.81■■□□□ 1.4
AC012236.1-202ENST00000558388 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
AC012236.1-202ENST00000558388 NACADO15069 1562 aa23.68■■□□□ 1.38
AC012236.1-202ENST00000558388 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
AC012236.1-202ENST00000558388 PABPN1Q86U42 306 aaKnown RBP eCLIP23.39■■□□□ 1.33
AC012236.1-202ENST00000558388 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.33
AC012236.1-202ENST00000558388 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
AC012236.1-202ENST00000558388 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
AC012236.1-202ENST00000558388 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
AC012236.1-202ENST00000558388 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
AC012236.1-202ENST00000558388 SCRIBQ14160 1630 aa23.04■■□□□ 1.28
AC012236.1-202ENST00000558388 FOXD1Q16676 465 aa22.8■■□□□ 1.24
AC012236.1-202ENST00000558388 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
AC012236.1-202ENST00000558388 CC2D2AQ9P2K1 1620 aa22.61■■□□□ 1.21
AC012236.1-202ENST00000558388 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
AC012236.1-202ENST00000558388 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
AC012236.1-202ENST00000558388 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
AC012236.1-202ENST00000558388 PLPPR3Q6T4P5 718 aa21.91■■□□□ 1.1
AC012236.1-202ENST00000558388 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
AC012236.1-202ENST00000558388 NCAPD3P42695 1498 aa21.87■■□□□ 1.09
AC012236.1-202ENST00000558388 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
AC012236.1-202ENST00000558388 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
AC012236.1-202ENST00000558388 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
AC012236.1-202ENST00000558388 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
AC012236.1-202ENST00000558388 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
AC012236.1-202ENST00000558388 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
AC012236.1-202ENST00000558388 NESP48681 1621 aa21.62■■□□□ 1.05
AC012236.1-202ENST00000558388 WIZO95785 1651 aa21.55■■□□□ 1.04
AC012236.1-202ENST00000558388 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
AC012236.1-202ENST00000558388 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
AC012236.1-202ENST00000558388 CUX2O14529 1486 aa21.36■■□□□ 1.01
AC012236.1-202ENST00000558388 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
AC012236.1-202ENST00000558388 ADRA2BP18089 450 aa21.34■■□□□ 1.01
AC012236.1-202ENST00000558388 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
AC012236.1-202ENST00000558388 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
AC012236.1-202ENST00000558388 PIAS4Q8N2W9 510 aaPredicted RBP21.33■■□□□ 1.01
AC012236.1-202ENST00000558388 THOC2Q8NI27 1593 aaKnown RBP21.29■■□□□ 1
AC012236.1-202ENST00000558388 MSH5O43196 834 aa21.26■□□□□ 0.99
AC012236.1-202ENST00000558388 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
AC012236.1-202ENST00000558388 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
AC012236.1-202ENST00000558388 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
AC012236.1-202ENST00000558388 DNAJC5Q9H3Z4 198 aa21.18■□□□□ 0.98
AC012236.1-202ENST00000558388 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
AC012236.1-202ENST00000558388 MRC2Q9UBG0 1479 aa21.05■□□□□ 0.96
AC012236.1-202ENST00000558388 CFTRP13569 1480 aa21.03■□□□□ 0.96
AC012236.1-202ENST00000558388 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
AC012236.1-202ENST00000558388 CEP164Q9UPV0 1460 aa21■□□□□ 0.95
AC012236.1-202ENST00000558388 WDR62O43379 1518 aa20.99■□□□□ 0.95
AC012236.1-202ENST00000558388 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
AC012236.1-202ENST00000558388 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
AC012236.1-202ENST00000558388 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
AC012236.1-202ENST00000558388 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
AC012236.1-202ENST00000558388 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
AC012236.1-202ENST00000558388 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
AC012236.1-202ENST00000558388 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
AC012236.1-202ENST00000558388 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
AC012236.1-202ENST00000558388 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
AC012236.1-202ENST00000558388 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
AC012236.1-202ENST00000558388 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
AC012236.1-202ENST00000558388 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
AC012236.1-202ENST00000558388 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
AC012236.1-202ENST00000558388 OSCARQ8IYS5 282 aa20.46■□□□□ 0.87
AC012236.1-202ENST00000558388 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.86
AC012236.1-202ENST00000558388 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
AC012236.1-202ENST00000558388 CUX1P39880 1505 aa20.42■□□□□ 0.86
AC012236.1-202ENST00000558388 FGD5Q6ZNL6 1462 aa20.38■□□□□ 0.85
AC012236.1-202ENST00000558388 SOGA1O94964 1423 aa20.36■□□□□ 0.85
AC012236.1-202ENST00000558388 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
AC012236.1-202ENST00000558388 CHD1O14646 1710 aa20.34■□□□□ 0.85
AC012236.1-202ENST00000558388 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.83
AC012236.1-202ENST00000558388 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.83
AC012236.1-202ENST00000558388 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.83
AC012236.1-202ENST00000558388 FBLN2P98095 1184 aa20.26■□□□□ 0.83
AC012236.1-202ENST00000558388 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
AC012236.1-202ENST00000558388 SNAPC4Q5SXM2 1469 aa20.22■□□□□ 0.83
AC012236.1-202ENST00000558388 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
AC012236.1-202ENST00000558388 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
AC012236.1-202ENST00000558388 SYNJ1O43426 1573 aa20.15■□□□□ 0.82
AC012236.1-202ENST00000558388 GRIN2BQ13224 1484 aa20.12■□□□□ 0.81
AC012236.1-202ENST00000558388 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
AC012236.1-202ENST00000558388 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
AC012236.1-202ENST00000558388 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
AC012236.1-202ENST00000558388 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
AC012236.1-202ENST00000558388 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
AC012236.1-202ENST00000558388 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
AC012236.1-202ENST00000558388 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
AC012236.1-202ENST00000558388 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
AC012236.1-202ENST00000558388 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
AC012236.1-202ENST00000558388 CYB5RLQ6IPT4 315 aa20.04■□□□□ 0.8
AC012236.1-202ENST00000558388 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
AC012236.1-202ENST00000558388 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
AC012236.1-202ENST00000558388 ADAMTS12P58397 1594 aa19.94■□□□□ 0.78
AC012236.1-202ENST00000558388 GRIN2AQ12879 1464 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms