RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.49
RCCD1-209ENST00000557750 SLIT1O75093 1534 aa18.07■□□□□ 0.48
RCCD1-209ENST00000557750 FOXD1Q16676 465 aa18.05■□□□□ 0.48
RCCD1-209ENST00000557750 EID1Q9Y6B2 187 aa18.05■□□□□ 0.48
RCCD1-209ENST00000557750 E9PCH4 1651 aa18.04■□□□□ 0.48
RCCD1-209ENST00000557750 NOS1P29475 1434 aa18.04■□□□□ 0.48
RCCD1-209ENST00000557750 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
RCCD1-209ENST00000557750 RGS17Q9UGC6 210 aaPredicted RBP18.01■□□□□ 0.47
RCCD1-209ENST00000557750 XIRP1Q702N8 1843 aaKnown RBP18.01■□□□□ 0.47
RCCD1-209ENST00000557750 SLC52A1Q9NWF4 448 aa18■□□□□ 0.47
RCCD1-209ENST00000557750 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
RCCD1-209ENST00000557750 PIK3C2BO00750 1634 aa18■□□□□ 0.47
RCCD1-209ENST00000557750 IDI1Q13907 227 aa17.99■□□□□ 0.47
RCCD1-209ENST00000557750 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
RCCD1-209ENST00000557750 TMEM94Q12767 1356 aa17.96■□□□□ 0.47
RCCD1-209ENST00000557750 CHGAP10645 457 aaKnown RBP17.95■□□□□ 0.46
RCCD1-209ENST00000557750 KCNA6P17658 529 aa17.95■□□□□ 0.46
RCCD1-209ENST00000557750 SLC26A8Q96RN1 970 aa17.95■□□□□ 0.46
RCCD1-209ENST00000557750 TRPM2O94759 1503 aa17.95■□□□□ 0.46
RCCD1-209ENST00000557750 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
RCCD1-209ENST00000557750 SPHKAPQ2M3C7 1700 aa17.94■□□□□ 0.46
RCCD1-209ENST00000557750 PROSER2Q86WR7 435 aaPredicted RBP17.93■□□□□ 0.46
RCCD1-209ENST00000557750 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
RCCD1-209ENST00000557750 KDM5AP29375 1690 aaKnown RBP17.92■□□□□ 0.46
RCCD1-209ENST00000557750 DHX57Q6P158 1386 aaKnown RBP17.9■□□□□ 0.46
RCCD1-209ENST00000557750 ADGRB3O60242 1522 aa17.89■□□□□ 0.45
RCCD1-209ENST00000557750 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
RCCD1-209ENST00000557750 ANKRD30BQ9BXX2 1392 aa17.89■□□□□ 0.45
RCCD1-209ENST00000557750 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
RCCD1-209ENST00000557750 ROBO1Q9Y6N7 1651 aa17.87■□□□□ 0.45
RCCD1-209ENST00000557750 BCANQ96GW7 911 aa17.87■□□□□ 0.45
RCCD1-209ENST00000557750 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
RCCD1-209ENST00000557750 NWD1Q149M9 1564 aa17.85■□□□□ 0.45
RCCD1-209ENST00000557750 NKTRP30414 1462 aaKnown RBP17.84■□□□□ 0.45
RCCD1-209ENST00000557750 TMEM131LA2VDJ0 1609 aa17.84■□□□□ 0.45
RCCD1-209ENST00000557750 MSH6P52701 1360 aa17.83■□□□□ 0.44
RCCD1-209ENST00000557750 SLAIN2Q9P270 581 aa17.83■□□□□ 0.44
RCCD1-209ENST00000557750 RGL3Q3MIN7 710 aa17.82■□□□□ 0.44
RCCD1-209ENST00000557750 ZFYVE9O95405 1425 aa17.81■□□□□ 0.44
RCCD1-209ENST00000557750 PPP1R15AO75807 674 aaPredicted RBP17.8■□□□□ 0.44
RCCD1-209ENST00000557750 HDGFP51858 240 aaKnown RBP17.8■□□□□ 0.44
RCCD1-209ENST00000557750 RIMS2Q9UQ26 1411 aa17.8■□□□□ 0.44
RCCD1-209ENST00000557750 PLEKHG1Q9ULL1 1385 aa17.8■□□□□ 0.44
RCCD1-209ENST00000557750 NUTM2DQ5VT03 806 aaPredicted RBP17.8■□□□□ 0.44
RCCD1-209ENST00000557750 SPATA31E1Q6ZUB1 1445 aa17.78■□□□□ 0.44
RCCD1-209ENST00000557750 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.78■□□□□ 0.44
RCCD1-209ENST00000557750 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.44
RCCD1-209ENST00000557750 PHLPP1O60346 1717 aa17.77■□□□□ 0.43
RCCD1-209ENST00000557750 KIF1BO60333 1816 aa17.77■□□□□ 0.43
RCCD1-209ENST00000557750 JCADQ9P266 1359 aa17.77■□□□□ 0.43
RCCD1-209ENST00000557750 MYO5BQ9ULV0 1848 aa17.76■□□□□ 0.43
RCCD1-209ENST00000557750 NEUROD1Q13562 356 aa17.76■□□□□ 0.43
RCCD1-209ENST00000557750 TBX22Q9Y458 520 aa17.76■□□□□ 0.43
RCCD1-209ENST00000557750 CHD2O14647 1828 aaKnown RBP17.76■□□□□ 0.43
RCCD1-209ENST00000557750 RPGRIP1LQ68CZ1 1315 aa17.76■□□□□ 0.43
RCCD1-209ENST00000557750 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
RCCD1-209ENST00000557750 VGFO15240 615 aaPredicted RBP17.72■□□□□ 0.43
RCCD1-209ENST00000557750 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
RCCD1-209ENST00000557750 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
RCCD1-209ENST00000557750 NCOA3Q9Y6Q9 1424 aa17.71■□□□□ 0.43
RCCD1-209ENST00000557750 COL16A1Q07092 1604 aaPredicted RBP17.71■□□□□ 0.43
RCCD1-209ENST00000557750 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
RCCD1-209ENST00000557750 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
RCCD1-209ENST00000557750 DCAF11Q8TEB1 546 aa17.69■□□□□ 0.42
RCCD1-209ENST00000557750 LRP6O75581 1613 aa17.68■□□□□ 0.42
RCCD1-209ENST00000557750 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
RCCD1-209ENST00000557750 ATF3P18847 181 aa17.67■□□□□ 0.42
RCCD1-209ENST00000557750 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
RCCD1-209ENST00000557750 KDM2AQ9Y2K7 1162 aa17.67■□□□□ 0.42
RCCD1-209ENST00000557750 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
RCCD1-209ENST00000557750 CLSPNQ9HAW4 1339 aa17.67■□□□□ 0.42
RCCD1-209ENST00000557750 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
RCCD1-209ENST00000557750 ADGRF5Q8IZF2 1346 aa17.67■□□□□ 0.42
RCCD1-209ENST00000557750 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
RCCD1-209ENST00000557750 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.66■□□□□ 0.42
RCCD1-209ENST00000557750 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
RCCD1-209ENST00000557750 AMOTL2Q9Y2J4 779 aa17.64■□□□□ 0.42
RCCD1-209ENST00000557750 AHDC1Q5TGY3 1603 aaPredicted RBP17.64■□□□□ 0.41
RCCD1-209ENST00000557750 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
RCCD1-209ENST00000557750 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.41
RCCD1-209ENST00000557750 PPLO60437 1756 aa17.63■□□□□ 0.41
RCCD1-209ENST00000557750 PTPRUQ92729 1446 aa17.63■□□□□ 0.41
RCCD1-209ENST00000557750 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
RCCD1-209ENST00000557750 MYOM2P54296 1465 aa17.63■□□□□ 0.41
RCCD1-209ENST00000557750 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
RCCD1-209ENST00000557750 STAC3Q96MF2 364 aa17.62■□□□□ 0.41
RCCD1-209ENST00000557750 SETBP1Q9Y6X0 1596 aa17.61■□□□□ 0.41
RCCD1-209ENST00000557750 IFT172Q9UG01 1749 aa17.6■□□□□ 0.41
RCCD1-209ENST00000557750 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
RCCD1-209ENST00000557750 PIK3C2GO75747 1445 aa17.6■□□□□ 0.41
RCCD1-209ENST00000557750 UPF1Q92900 1129 aaKnown RBP eCLIP17.6■□□□□ 0.41
RCCD1-209ENST00000557750 NUTM2BA6NNL0 878 aaPredicted RBP17.58■□□□□ 0.41
RCCD1-209ENST00000557750 NUTM2EB1AL46 878 aaPredicted RBP17.58■□□□□ 0.41
RCCD1-209ENST00000557750 NUTM2AQ8IVF1 878 aaPredicted RBP17.58■□□□□ 0.41
RCCD1-209ENST00000557750 NRXN1Q9ULB1 1477 aa17.58■□□□□ 0.41
RCCD1-209ENST00000557750 NRXN3Q9Y4C0 1643 aa17.57■□□□□ 0.4
RCCD1-209ENST00000557750 METP08581 1390 aa17.56■□□□□ 0.4
RCCD1-209ENST00000557750 RXRBP28702 533 aa17.56■□□□□ 0.4
RCCD1-209ENST00000557750 CFAP70Q5T0N1 1121 aa17.56■□□□□ 0.4
RCCD1-209ENST00000557750 DCCP43146 1447 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms