RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 STRCQ7RTU9 1775 aa20.52■□□□□ 0.88
SUPT16H-208ENST00000557652 MED14O60244 1454 aa20.52■□□□□ 0.88
SUPT16H-208ENST00000557652 SCAF11Q99590 1463 aaKnown RBP20.52■□□□□ 0.88
SUPT16H-208ENST00000557652 CHGAP10645 457 aaKnown RBP20.52■□□□□ 0.88
SUPT16H-208ENST00000557652 DMRT2Q9Y5R5 561 aa20.51■□□□□ 0.87
SUPT16H-208ENST00000557652 RIMS2Q9UQ26 1411 aa20.51■□□□□ 0.87
SUPT16H-208ENST00000557652 NEXMIFQ5QGS0 1516 aa20.5■□□□□ 0.87
SUPT16H-208ENST00000557652 HSPA2P54652 639 aa20.48■□□□□ 0.87
SUPT16H-208ENST00000557652 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
SUPT16H-208ENST00000557652 VGFO15240 615 aaPredicted RBP20.47■□□□□ 0.87
SUPT16H-208ENST00000557652 IQGAP1P46940 1657 aa20.47■□□□□ 0.87
SUPT16H-208ENST00000557652 TXNDC2Q86VQ3 553 aa20.46■□□□□ 0.87
SUPT16H-208ENST00000557652 MYOM2P54296 1465 aa20.45■□□□□ 0.86
SUPT16H-208ENST00000557652 PLEKHG1Q9ULL1 1385 aa20.45■□□□□ 0.86
SUPT16H-208ENST00000557652 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
SUPT16H-208ENST00000557652 TIMELESSQ9UNS1 1208 aa20.44■□□□□ 0.86
SUPT16H-208ENST00000557652 DIP2AQ14689 1571 aa20.43■□□□□ 0.86
SUPT16H-208ENST00000557652 PPP1R15AO75807 674 aaPredicted RBP20.43■□□□□ 0.86
SUPT16H-208ENST00000557652 NPHP4O75161 1426 aaPredicted RBP20.43■□□□□ 0.86
SUPT16H-208ENST00000557652 LTKP29376 864 aa20.42■□□□□ 0.86
SUPT16H-208ENST00000557652 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
SUPT16H-208ENST00000557652 RGL3Q3MIN7 710 aa20.4■□□□□ 0.86
SUPT16H-208ENST00000557652 LAMC1P11047 1609 aa20.39■□□□□ 0.86
SUPT16H-208ENST00000557652 NRXN1Q9ULB1 1477 aa20.39■□□□□ 0.85
SUPT16H-208ENST00000557652 NCKAP5LQ9HCH0 1330 aa20.38■□□□□ 0.85
SUPT16H-208ENST00000557652 SIN3AQ96ST3 1273 aa20.37■□□□□ 0.85
SUPT16H-208ENST00000557652 TONSLQ96HA7 1378 aa20.36■□□□□ 0.85
SUPT16H-208ENST00000557652 PIK3R4Q99570 1358 aa20.35■□□□□ 0.85
SUPT16H-208ENST00000557652 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
SUPT16H-208ENST00000557652 KIAA1210Q9ULL0 1709 aa20.35■□□□□ 0.85
SUPT16H-208ENST00000557652 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
SUPT16H-208ENST00000557652 NEUROD1Q13562 356 aa20.34■□□□□ 0.85
SUPT16H-208ENST00000557652 TBX22Q9Y458 520 aa20.34■□□□□ 0.85
SUPT16H-208ENST00000557652 DCAF11Q8TEB1 546 aa20.33■□□□□ 0.85
SUPT16H-208ENST00000557652 SETD1AO15047 1707 aaKnown RBP20.31■□□□□ 0.84
SUPT16H-208ENST00000557652 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
SUPT16H-208ENST00000557652 L3MBTL2Q969R5 705 aa20.31■□□□□ 0.84
SUPT16H-208ENST00000557652 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
SUPT16H-208ENST00000557652 ALKQ9UM73 1620 aa20.3■□□□□ 0.84
SUPT16H-208ENST00000557652 BCANQ96GW7 911 aa20.29■□□□□ 0.84
SUPT16H-208ENST00000557652 ADGRF5Q8IZF2 1346 aa20.28■□□□□ 0.84
SUPT16H-208ENST00000557652 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
SUPT16H-208ENST00000557652 NUTM2DQ5VT03 806 aaPredicted RBP20.27■□□□□ 0.84
SUPT16H-208ENST00000557652 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
SUPT16H-208ENST00000557652 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
SUPT16H-208ENST00000557652 KDM2AQ9Y2K7 1162 aa20.24■□□□□ 0.83
SUPT16H-208ENST00000557652 CPS1P31327 1500 aa20.23■□□□□ 0.83
SUPT16H-208ENST00000557652 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
SUPT16H-208ENST00000557652 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
SUPT16H-208ENST00000557652 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
SUPT16H-208ENST00000557652 TRPM1Q7Z4N2 1603 aa20.21■□□□□ 0.83
SUPT16H-208ENST00000557652 KCNA6P17658 529 aa20.21■□□□□ 0.83
SUPT16H-208ENST00000557652 XRN1Q8IZH2 1706 aaKnown RBP20.21■□□□□ 0.83
SUPT16H-208ENST00000557652 ADGRB1O14514 1584 aa20.18■□□□□ 0.82
SUPT16H-208ENST00000557652 TECPR2O15040 1411 aa20.18■□□□□ 0.82
SUPT16H-208ENST00000557652 STRCP1A6NGW2 1772 aa20.17■□□□□ 0.82
SUPT16H-208ENST00000557652 METP08581 1390 aa20.17■□□□□ 0.82
SUPT16H-208ENST00000557652 CFAP70Q5T0N1 1121 aa20.16■□□□□ 0.82
SUPT16H-208ENST00000557652 LRPPRCP42704 1394 aaKnown RBP20.16■□□□□ 0.82
SUPT16H-208ENST00000557652 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
SUPT16H-208ENST00000557652 PTCH1Q13635 1447 aa20.16■□□□□ 0.82
SUPT16H-208ENST00000557652 NCOA3Q9Y6Q9 1424 aa20.16■□□□□ 0.82
SUPT16H-208ENST00000557652 RALGAPBQ86X10 1494 aa20.16■□□□□ 0.82
SUPT16H-208ENST00000557652 ASXL1Q8IXJ9 1541 aa20.16■□□□□ 0.82
SUPT16H-208ENST00000557652 LTBP4Q8N2S1 1624 aa20.16■□□□□ 0.82
SUPT16H-208ENST00000557652 SIRT1Q96EB6 747 aa20.15■□□□□ 0.82
SUPT16H-208ENST00000557652 IQSEC2Q5JU85 1478 aa20.15■□□□□ 0.82
SUPT16H-208ENST00000557652 DLC1Q96QB1 1528 aa20.15■□□□□ 0.82
SUPT16H-208ENST00000557652 YTHDC2Q9H6S0 1430 aaKnown RBP20.14■□□□□ 0.81
SUPT16H-208ENST00000557652 GPRASP1Q5JY77 1395 aa20.14■□□□□ 0.81
SUPT16H-208ENST00000557652 ZNF335Q9H4Z2 1342 aaPredicted RBP20.13■□□□□ 0.81
SUPT16H-208ENST00000557652 PTPRUQ92729 1446 aa20.12■□□□□ 0.81
SUPT16H-208ENST00000557652 AMOTL2Q9Y2J4 779 aa20.12■□□□□ 0.81
SUPT16H-208ENST00000557652 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
SUPT16H-208ENST00000557652 ROCK2O75116 1388 aaKnown RBP20.09■□□□□ 0.81
SUPT16H-208ENST00000557652 NBPF8Q3BBV2 869 aa20.09■□□□□ 0.81
SUPT16H-208ENST00000557652 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-208ENST00000557652 LRRC7Q96NW7 1537 aa20.07■□□□□ 0.8
SUPT16H-208ENST00000557652 XIRP1Q702N8 1843 aaKnown RBP20.07■□□□□ 0.8
SUPT16H-208ENST00000557652 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
SUPT16H-208ENST00000557652 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
SUPT16H-208ENST00000557652 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
SUPT16H-208ENST00000557652 EIF3AQ14152 1382 aaKnown RBP20.06■□□□□ 0.8
SUPT16H-208ENST00000557652 PROSER2Q86WR7 435 aaPredicted RBP20.05■□□□□ 0.8
SUPT16H-208ENST00000557652 NBPF1Q3BBV0 1214 aa20.03■□□□□ 0.8
SUPT16H-208ENST00000557652 DCCP43146 1447 aa20.02■□□□□ 0.8
SUPT16H-208ENST00000557652 TMEM94Q12767 1356 aa20.02■□□□□ 0.8
SUPT16H-208ENST00000557652 ROBO2Q9HCK4 1378 aa20.02■□□□□ 0.8
SUPT16H-208ENST00000557652 SLC24A1O60721 1099 aa20.01■□□□□ 0.79
SUPT16H-208ENST00000557652 CARD11Q9BXL7 1154 aa20.01■□□□□ 0.79
SUPT16H-208ENST00000557652 STK26Q9P289 416 aa20■□□□□ 0.79
SUPT16H-208ENST00000557652 ADGRL3Q9HAR2 1447 aa20■□□□□ 0.79
SUPT16H-208ENST00000557652 MSH6P52701 1360 aa19.98■□□□□ 0.79
SUPT16H-208ENST00000557652 CERKQ8TCT0 537 aa19.98■□□□□ 0.79
SUPT16H-208ENST00000557652 C19orf44Q9H6X5 657 aa19.98■□□□□ 0.79
SUPT16H-208ENST00000557652 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
SUPT16H-208ENST00000557652 ADGRB2O60241 1585 aa19.98■□□□□ 0.79
SUPT16H-208ENST00000557652 NALCNQ8IZF0 1738 aa19.98■□□□□ 0.79
SUPT16H-208ENST00000557652 POGKQ9P215 609 aa19.97■□□□□ 0.79
SUPT16H-208ENST00000557652 SBNO2Q9Y2G9 1366 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms