RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
MARK3-210ENST00000556463 CRBNQ96SW2 442 aa11.16□□□□□ -0.62
MARK3-210ENST00000556463 C9orf84Q5VXU9 1444 aa11.15□□□□□ -0.62
MARK3-210ENST00000556463 UNC13BO14795 1591 aa11.15□□□□□ -0.62
MARK3-210ENST00000556463 RGS3P49796 1198 aa11.15□□□□□ -0.63
MARK3-210ENST00000556463 TESK2Q96S53 571 aa11.15□□□□□ -0.63
MARK3-210ENST00000556463 MYO5CQ9NQX4 1742 aa11.14□□□□□ -0.63
MARK3-210ENST00000556463 ABCA8O94911 1581 aa11.14□□□□□ -0.63
MARK3-210ENST00000556463 FAM135AQ9P2D6 1515 aa11.14□□□□□ -0.63
MARK3-210ENST00000556463 PLA2R1Q13018 1463 aa11.14□□□□□ -0.63
MARK3-210ENST00000556463 CENPQQ7L2Z9 268 aaPredicted RBP11.14□□□□□ -0.63
MARK3-210ENST00000556463 EIF2AK4Q9P2K8 1649 aaKnown RBP11.13□□□□□ -0.63
MARK3-210ENST00000556463 TRHP20396 242 aaPredicted RBP11.13□□□□□ -0.63
MARK3-210ENST00000556463 CFDP1Q9UEE9 299 aaPredicted RBP11.13□□□□□ -0.63
MARK3-210ENST00000556463 NUP155O75694 1391 aa11.13□□□□□ -0.63
MARK3-210ENST00000556463 ATP10AO60312 1499 aa11.13□□□□□ -0.63
MARK3-210ENST00000556463 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
MARK3-210ENST00000556463 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
MARK3-210ENST00000556463 PLIN1O60240 522 aa11.12□□□□□ -0.63
MARK3-210ENST00000556463 SKAP1Q86WV1 359 aa11.12□□□□□ -0.63
MARK3-210ENST00000556463 A2MP01023 1474 aa11.12□□□□□ -0.63
MARK3-210ENST00000556463 NUP160Q12769 1436 aa11.12□□□□□ -0.63
MARK3-210ENST00000556463 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
MARK3-210ENST00000556463 C20orf194Q5TEA3 1177 aa11.12□□□□□ -0.63
MARK3-210ENST00000556463 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
MARK3-210ENST00000556463 CCDC141Q6ZP82 1450 aa11.11□□□□□ -0.63
MARK3-210ENST00000556463 MAST1Q9Y2H9 1570 aa11.11□□□□□ -0.63
MARK3-210ENST00000556463 RGL2O15211 777 aa11.11□□□□□ -0.63
MARK3-210ENST00000556463 DUSP27Q5VZP5 1158 aa11.11□□□□□ -0.63
MARK3-210ENST00000556463 PLB1Q6P1J6 1458 aa11.11□□□□□ -0.63
MARK3-210ENST00000556463 ABCC2Q92887 1545 aa11.11□□□□□ -0.63
MARK3-210ENST00000556463 WDR7Q9Y4E6 1490 aa11.1□□□□□ -0.63
MARK3-210ENST00000556463 FGD1P98174 961 aa11.1□□□□□ -0.63
MARK3-210ENST00000556463 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
MARK3-210ENST00000556463 USP19O94966 1318 aa11.1□□□□□ -0.63
MARK3-210ENST00000556463 PLEKHH1Q9ULM0 1364 aa11.1□□□□□ -0.63
MARK3-210ENST00000556463 NLRP1Q9C000 1473 aa11.1□□□□□ -0.63
MARK3-210ENST00000556463 FAM43AQ8N2R8 423 aa11.1□□□□□ -0.63
MARK3-210ENST00000556463 IQGAP3Q86VI3 1631 aa11.1□□□□□ -0.63
MARK3-210ENST00000556463 IFT140Q96RY7 1462 aa11.1□□□□□ -0.63
MARK3-210ENST00000556463 ZNF326Q5BKZ1 582 aaKnown RBP11.09□□□□□ -0.63
MARK3-210ENST00000556463 IQGAP1P46940 1657 aa11.09□□□□□ -0.63
MARK3-210ENST00000556463 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
MARK3-210ENST00000556463 AAMPQ13685 434 aa11.09□□□□□ -0.63
MARK3-210ENST00000556463 ERBINQ96RT1 1412 aa11.09□□□□□ -0.63
MARK3-210ENST00000556463 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
MARK3-210ENST00000556463 MAGI2Q86UL8 1455 aa11.08□□□□□ -0.64
MARK3-210ENST00000556463 DCAF11Q8TEB1 546 aa11.08□□□□□ -0.64
MARK3-210ENST00000556463 PLXNC1O60486 1568 aa11.08□□□□□ -0.64
MARK3-210ENST00000556463 SYNMO15061 1565 aa11.07□□□□□ -0.64
MARK3-210ENST00000556463 CDC42BPBQ9Y5S2 1711 aa11.07□□□□□ -0.64
MARK3-210ENST00000556463 MYOM1P52179 1685 aa11.07□□□□□ -0.64
MARK3-210ENST00000556463 MAGI1Q96QZ7 1491 aaPredicted RBP11.07□□□□□ -0.64
MARK3-210ENST00000556463 SAMD9LQ8IVG5 1584 aa11.06□□□□□ -0.64
MARK3-210ENST00000556463 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
MARK3-210ENST00000556463 PIK3C2GO75747 1445 aa11.06□□□□□ -0.64
MARK3-210ENST00000556463 FRAT2O75474 233 aaPredicted RBP11.06□□□□□ -0.64
MARK3-210ENST00000556463 ECM2O94769 699 aaPredicted RBP11.06□□□□□ -0.64
MARK3-210ENST00000556463 PREX2Q70Z35 1606 aa11.06□□□□□ -0.64
MARK3-210ENST00000556463 NPC1L1Q9UHC9 1359 aa11.06□□□□□ -0.64
MARK3-210ENST00000556463 ZMYM3Q14202 1370 aa11.05□□□□□ -0.64
MARK3-210ENST00000556463 NBPF1Q3BBV0 1214 aa11.05□□□□□ -0.64
MARK3-210ENST00000556463 ZBTB7CA1YPR0 619 aa11.05□□□□□ -0.64
MARK3-210ENST00000556463 ADAMTS8Q9UP79 889 aa11.05□□□□□ -0.64
MARK3-210ENST00000556463 ATP10BO94823 1461 aa11.04□□□□□ -0.64
MARK3-210ENST00000556463 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
MARK3-210ENST00000556463 RRP9O43818 475 aaKnown RBP11.03□□□□□ -0.64
MARK3-210ENST00000556463 SLFN5Q08AF3 891 aa11.03□□□□□ -0.64
MARK3-210ENST00000556463 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
MARK3-210ENST00000556463 PANK3Q9H999 370 aa11.03□□□□□ -0.64
MARK3-210ENST00000556463 RRAGDQ9NQL2 400 aaPredicted RBP11.03□□□□□ -0.64
MARK3-210ENST00000556463 CCDC144AA2RUR9 1427 aa11.03□□□□□ -0.64
MARK3-210ENST00000556463 PROM2Q8N271 834 aa11.03□□□□□ -0.64
MARK3-210ENST00000556463 MADDQ8WXG6 1647 aa11.03□□□□□ -0.64
MARK3-210ENST00000556463 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.64
MARK3-210ENST00000556463 ANTXR1Q9H6X2 564 aa11.02□□□□□ -0.65
MARK3-210ENST00000556463 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
MARK3-210ENST00000556463 PRDM10Q9NQV6 1147 aa11.01□□□□□ -0.65
MARK3-210ENST00000556463 NKTRP30414 1462 aaKnown RBP11.01□□□□□ -0.65
MARK3-210ENST00000556463 SLKQ9H2G2 1235 aaPredicted RBP11.01□□□□□ -0.65
MARK3-210ENST00000556463 SCAPERQ9BY12 1400 aa11□□□□□ -0.65
MARK3-210ENST00000556463 PPP2R1AP30153 589 aa11□□□□□ -0.65
MARK3-210ENST00000556463 ASXL1Q8IXJ9 1541 aa11□□□□□ -0.65
MARK3-210ENST00000556463 FAM13BQ9NYF5 915 aa11□□□□□ -0.65
MARK3-210ENST00000556463 SPHKAPQ2M3C7 1700 aa10.99□□□□□ -0.65
MARK3-210ENST00000556463 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
MARK3-210ENST00000556463 CC2D1BQ5T0F9 858 aaKnown RBP10.99□□□□□ -0.65
MARK3-210ENST00000556463 TRIM44Q96DX7 344 aaPredicted RBP10.99□□□□□ -0.65
MARK3-210ENST00000556463 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
MARK3-210ENST00000556463 KIAA1210Q9ULL0 1709 aa10.98□□□□□ -0.65
MARK3-210ENST00000556463 DUOX2Q9NRD8 1548 aa10.98□□□□□ -0.65
MARK3-210ENST00000556463 BRPF1P55201 1214 aaPredicted RBP10.98□□□□□ -0.65
MARK3-210ENST00000556463 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
MARK3-210ENST00000556463 NEURL4Q96JN8 1562 aa10.98□□□□□ -0.65
MARK3-210ENST00000556463 TMF1P82094 1093 aa10.97□□□□□ -0.65
MARK3-210ENST00000556463 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.97□□□□□ -0.65
MARK3-210ENST00000556463 IGHDP01880 384 aa10.97□□□□□ -0.65
MARK3-210ENST00000556463 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
MARK3-210ENST00000556463 ZNF777Q9ULD5 760 aaPredicted RBP10.97□□□□□ -0.65
MARK3-210ENST00000556463 FSD2A1L4K1 749 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms