RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 RIMS2Q9UQ26 1411 aa18.01■□□□□ 0.47
ABCD4-223ENST00000555904 SLIT1O75093 1534 aa18■□□□□ 0.47
ABCD4-223ENST00000555904 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
ABCD4-223ENST00000555904 STAC3Q96MF2 364 aa18■□□□□ 0.47
ABCD4-223ENST00000555904 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
ABCD4-223ENST00000555904 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
ABCD4-223ENST00000555904 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
ABCD4-223ENST00000555904 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
ABCD4-223ENST00000555904 ANKLE2Q86XL3 938 aa17.98■□□□□ 0.47
ABCD4-223ENST00000555904 ARHGAP23Q9P227 1491 aa17.98■□□□□ 0.47
ABCD4-223ENST00000555904 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
ABCD4-223ENST00000555904 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
ABCD4-223ENST00000555904 TXNDC2Q86VQ3 553 aa17.97■□□□□ 0.47
ABCD4-223ENST00000555904 MYOM2P54296 1465 aa17.96■□□□□ 0.47
ABCD4-223ENST00000555904 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
ABCD4-223ENST00000555904 PPLO60437 1756 aa17.95■□□□□ 0.46
ABCD4-223ENST00000555904 HSPA2P54652 639 aa17.95■□□□□ 0.46
ABCD4-223ENST00000555904 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-223ENST00000555904 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-223ENST00000555904 BCANQ96GW7 911 aa17.94■□□□□ 0.46
ABCD4-223ENST00000555904 IFT172Q9UG01 1749 aa17.94■□□□□ 0.46
ABCD4-223ENST00000555904 LTKP29376 864 aa17.91■□□□□ 0.46
ABCD4-223ENST00000555904 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
ABCD4-223ENST00000555904 POLR1AO95602 1720 aaPredicted RBP17.9■□□□□ 0.46
ABCD4-223ENST00000555904 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
ABCD4-223ENST00000555904 PIK3C2GO75747 1445 aa17.89■□□□□ 0.45
ABCD4-223ENST00000555904 PRAG1Q86YV5 1406 aa17.89■□□□□ 0.45
ABCD4-223ENST00000555904 NRXN1Q9ULB1 1477 aa17.88■□□□□ 0.45
ABCD4-223ENST00000555904 NCKAP5LQ9HCH0 1330 aa17.88■□□□□ 0.45
ABCD4-223ENST00000555904 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
ABCD4-223ENST00000555904 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
ABCD4-223ENST00000555904 MED14O60244 1454 aa17.86■□□□□ 0.45
ABCD4-223ENST00000555904 SETBP1Q9Y6X0 1596 aa17.86■□□□□ 0.45
ABCD4-223ENST00000555904 LAMC1P11047 1609 aa17.85■□□□□ 0.45
ABCD4-223ENST00000555904 IQGAP1P46940 1657 aa17.85■□□□□ 0.45
ABCD4-223ENST00000555904 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
ABCD4-223ENST00000555904 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
ABCD4-223ENST00000555904 SLC26A8Q96RN1 970 aa17.81■□□□□ 0.44
ABCD4-223ENST00000555904 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
ABCD4-223ENST00000555904 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
ABCD4-223ENST00000555904 C14orf93Q9H972 538 aaKnown RBP17.8■□□□□ 0.44
ABCD4-223ENST00000555904 NRXN3Q9Y4C0 1643 aa17.8■□□□□ 0.44
ABCD4-223ENST00000555904 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
ABCD4-223ENST00000555904 KIAA1210Q9ULL0 1709 aa17.79■□□□□ 0.44
ABCD4-223ENST00000555904 NBPF8Q3BBV2 869 aa17.79■□□□□ 0.44
ABCD4-223ENST00000555904 CFAP70Q5T0N1 1121 aa17.79■□□□□ 0.44
ABCD4-223ENST00000555904 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
ABCD4-223ENST00000555904 RALGAPBQ86X10 1494 aa17.79■□□□□ 0.44
ABCD4-223ENST00000555904 ADAMTS13Q76LX8 1427 aa17.79■□□□□ 0.44
ABCD4-223ENST00000555904 TRPM1Q7Z4N2 1603 aa17.78■□□□□ 0.44
ABCD4-223ENST00000555904 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
ABCD4-223ENST00000555904 CARD11Q9BXL7 1154 aa17.74■□□□□ 0.43
ABCD4-223ENST00000555904 METP08581 1390 aa17.74■□□□□ 0.43
ABCD4-223ENST00000555904 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
ABCD4-223ENST00000555904 SETD1AO15047 1707 aaKnown RBP17.72■□□□□ 0.43
ABCD4-223ENST00000555904 ADGRB1O14514 1584 aa17.72■□□□□ 0.43
ABCD4-223ENST00000555904 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
ABCD4-223ENST00000555904 EIF3AQ14152 1382 aaKnown RBP17.71■□□□□ 0.43
ABCD4-223ENST00000555904 GPRASP1Q5JY77 1395 aa17.71■□□□□ 0.43
ABCD4-223ENST00000555904 ASXL1Q8IXJ9 1541 aa17.71■□□□□ 0.43
ABCD4-223ENST00000555904 YTHDC2Q9H6S0 1430 aaKnown RBP17.71■□□□□ 0.43
ABCD4-223ENST00000555904 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
ABCD4-223ENST00000555904 STK26Q9P289 416 aa17.7■□□□□ 0.42
ABCD4-223ENST00000555904 AMOTL2Q9Y2J4 779 aa17.68■□□□□ 0.42
ABCD4-223ENST00000555904 KCNA6P17658 529 aa17.67■□□□□ 0.42
ABCD4-223ENST00000555904 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
ABCD4-223ENST00000555904 ABCC11Q96J66 1382 aa17.66■□□□□ 0.42
ABCD4-223ENST00000555904 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
ABCD4-223ENST00000555904 NWD1Q149M9 1564 aa17.66■□□□□ 0.42
ABCD4-223ENST00000555904 TECPR2O15040 1411 aa17.65■□□□□ 0.42
ABCD4-223ENST00000555904 PTPRUQ92729 1446 aa17.65■□□□□ 0.42
ABCD4-223ENST00000555904 XRN1Q8IZH2 1706 aaKnown RBP17.65■□□□□ 0.42
ABCD4-223ENST00000555904 USP47Q96K76 1375 aa17.65■□□□□ 0.42
ABCD4-223ENST00000555904 PTCH1Q13635 1447 aa17.64■□□□□ 0.42
ABCD4-223ENST00000555904 KNDC1Q76NI1 1749 aa17.64■□□□□ 0.41
ABCD4-223ENST00000555904 CPS1P31327 1500 aa17.64■□□□□ 0.41
ABCD4-223ENST00000555904 DLC1Q96QB1 1528 aa17.64■□□□□ 0.41
ABCD4-223ENST00000555904 POGKQ9P215 609 aa17.64■□□□□ 0.41
ABCD4-223ENST00000555904 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
ABCD4-223ENST00000555904 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
ABCD4-223ENST00000555904 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
ABCD4-223ENST00000555904 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
ABCD4-223ENST00000555904 PRAM1Q96QH2 718 aa17.61■□□□□ 0.41
ABCD4-223ENST00000555904 ROBO2Q9HCK4 1378 aa17.61■□□□□ 0.41
ABCD4-223ENST00000555904 SIRT1Q96EB6 747 aa17.6■□□□□ 0.41
ABCD4-223ENST00000555904 CENPJQ9HC77 1338 aaPredicted RBP17.6■□□□□ 0.41
ABCD4-223ENST00000555904 ARHGEF28Q8N1W1 1705 aaKnown RBP17.59■□□□□ 0.41
ABCD4-223ENST00000555904 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
ABCD4-223ENST00000555904 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
ABCD4-223ENST00000555904 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
ABCD4-223ENST00000555904 SAFB2Q14151 953 aaKnown RBP eCLIP17.57■□□□□ 0.4
ABCD4-223ENST00000555904 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
ABCD4-223ENST00000555904 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
ABCD4-223ENST00000555904 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
ABCD4-223ENST00000555904 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
ABCD4-223ENST00000555904 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
ABCD4-223ENST00000555904 STRCP1A6NGW2 1772 aa17.54■□□□□ 0.4
ABCD4-223ENST00000555904 QRICH2Q9H0J4 1663 aa17.54■□□□□ 0.4
ABCD4-223ENST00000555904 NCOA3Q9Y6Q9 1424 aa17.54■□□□□ 0.4
ABCD4-223ENST00000555904 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms