RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 UHRF1BP1LA0JNW5 1464 aa9.41□□□□□ -0.9
TDP1-213ENST00000555880 DUOX2Q9NRD8 1548 aa9.41□□□□□ -0.9
TDP1-213ENST00000555880 LRPPRCP42704 1394 aaKnown RBP9.4□□□□□ -0.91
TDP1-213ENST00000555880 ERBINQ96RT1 1412 aa9.39□□□□□ -0.91
TDP1-213ENST00000555880 NPM1P06748 294 aaKnown RBP eCLIP9.39□□□□□ -0.91
TDP1-213ENST00000555880 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
TDP1-213ENST00000555880 RNF123Q5XPI4 1314 aa9.39□□□□□ -0.91
TDP1-213ENST00000555880 GPRASP1Q5JY77 1395 aa9.39□□□□□ -0.91
TDP1-213ENST00000555880 NLRP13Q86W25 1043 aa9.38□□□□□ -0.91
TDP1-213ENST00000555880 A2MP01023 1474 aa9.38□□□□□ -0.91
TDP1-213ENST00000555880 PRDM15P57071 1507 aaPredicted RBP9.38□□□□□ -0.91
TDP1-213ENST00000555880 RGL3Q3MIN7 710 aa9.38□□□□□ -0.91
TDP1-213ENST00000555880 CCDC136Q96JN2 1154 aa9.38□□□□□ -0.91
TDP1-213ENST00000555880 EFCAB2Q5VUJ9 269 aa9.37□□□□□ -0.91
TDP1-213ENST00000555880 PARD3Q8TEW0 1356 aa9.37□□□□□ -0.91
TDP1-213ENST00000555880 ATP10AO60312 1499 aa9.37□□□□□ -0.91
TDP1-213ENST00000555880 MAGI2Q86UL8 1455 aa9.37□□□□□ -0.91
TDP1-213ENST00000555880 COL17A1Q9UMD9 1497 aaPredicted RBP9.37□□□□□ -0.91
TDP1-213ENST00000555880 PLA2R1Q13018 1463 aa9.36□□□□□ -0.91
TDP1-213ENST00000555880 WASHC2CQ9Y4E1 1318 aa9.36□□□□□ -0.91
TDP1-213ENST00000555880 ZCCHC11Q5TAX3 1644 aaKnown RBP9.35□□□□□ -0.91
TDP1-213ENST00000555880 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
TDP1-213ENST00000555880 PLCH2O75038 1416 aa9.35□□□□□ -0.91
TDP1-213ENST00000555880 TMF1P82094 1093 aa9.34□□□□□ -0.91
TDP1-213ENST00000555880 PDE3BQ13370 1112 aa9.34□□□□□ -0.91
TDP1-213ENST00000555880 RNF17Q9BXT8 1623 aaKnown RBP9.34□□□□□ -0.91
TDP1-213ENST00000555880 ABCC1P33527 1531 aa9.34□□□□□ -0.91
TDP1-213ENST00000555880 PAK3O75914 559 aaPredicted RBP9.34□□□□□ -0.91
TDP1-213ENST00000555880 NBPF1Q3BBV0 1214 aa9.34□□□□□ -0.91
TDP1-213ENST00000555880 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
TDP1-213ENST00000555880 ZMYM4Q5VZL5 1548 aa9.34□□□□□ -0.92
TDP1-213ENST00000555880 INSRP06213 1382 aa9.33□□□□□ -0.92
TDP1-213ENST00000555880 GALR2O43603 387 aaPredicted RBP9.32□□□□□ -0.92
TDP1-213ENST00000555880 DISP3Q9P2K9 1392 aa9.32□□□□□ -0.92
TDP1-213ENST00000555880 SENP3-EIF4A1A0A087X0R7 540 aa9.31□□□□□ -0.92
TDP1-213ENST00000555880 CLCN6P51797 869 aa9.31□□□□□ -0.92
TDP1-213ENST00000555880 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
TDP1-213ENST00000555880 TESK2Q96S53 571 aa9.31□□□□□ -0.92
TDP1-213ENST00000555880 RCAN3Q9UKA8 241 aa9.31□□□□□ -0.92
TDP1-213ENST00000555880 CEP152O94986 1710 aa9.31□□□□□ -0.92
TDP1-213ENST00000555880 ARAP3Q8WWN8 1544 aa9.31□□□□□ -0.92
TDP1-213ENST00000555880 WDR7Q9Y4E6 1490 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 SPHKAPQ2M3C7 1700 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 PER1O15534 1290 aaPredicted RBP9.3□□□□□ -0.92
TDP1-213ENST00000555880 TRPM2O94759 1503 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 MADDQ8WXG6 1647 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 SPAG9O60271 1321 aaKnown RBP9.3□□□□□ -0.92
TDP1-213ENST00000555880 RTEL1-TNFRSF6BF6WH68 1400 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 BLMP54132 1417 aaPredicted RBP9.3□□□□□ -0.92
TDP1-213ENST00000555880 IQGAP1P46940 1657 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 ANP32AP39687 249 aaKnown RBP9.3□□□□□ -0.92
TDP1-213ENST00000555880 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 CC2D1BQ5T0F9 858 aaKnown RBP9.3□□□□□ -0.92
TDP1-213ENST00000555880 STAC3Q96MF2 364 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 PANK3Q9H999 370 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
TDP1-213ENST00000555880 KANK1Q14678 1352 aa9.29□□□□□ -0.92
TDP1-213ENST00000555880 TRAPPC8Q9Y2L5 1435 aa9.28□□□□□ -0.92
TDP1-213ENST00000555880 ZFYVE16Q7Z3T8 1539 aa9.28□□□□□ -0.92
TDP1-213ENST00000555880 TET3O43151 1660 aa9.28□□□□□ -0.92
TDP1-213ENST00000555880 DEPDC5O75140 1603 aa9.28□□□□□ -0.92
TDP1-213ENST00000555880 EIF3AQ14152 1382 aaKnown RBP9.28□□□□□ -0.92
TDP1-213ENST00000555880 DCBLD2Q96PD2 775 aa9.28□□□□□ -0.92
TDP1-213ENST00000555880 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
TDP1-213ENST00000555880 SALL2Q9Y467 1007 aaPredicted RBP9.28□□□□□ -0.92
TDP1-213ENST00000555880 ASXL2Q76L83 1435 aa9.27□□□□□ -0.93
TDP1-213ENST00000555880 SYNMO15061 1565 aa9.27□□□□□ -0.93
TDP1-213ENST00000555880 TSPYL2Q9H2G4 693 aaPredicted RBP9.27□□□□□ -0.93
TDP1-213ENST00000555880 NOP58Q9Y2X3 529 aaKnown RBP9.27□□□□□ -0.93
TDP1-213ENST00000555880 SCAF11Q99590 1463 aaKnown RBP9.26□□□□□ -0.93
TDP1-213ENST00000555880 SCAPERQ9BY12 1400 aa9.26□□□□□ -0.93
TDP1-213ENST00000555880 CLTCL1P53675 1640 aa9.26□□□□□ -0.93
TDP1-213ENST00000555880 KIAA1210Q9ULL0 1709 aa9.25□□□□□ -0.93
TDP1-213ENST00000555880 ATP7AQ04656 1500 aa9.25□□□□□ -0.93
TDP1-213ENST00000555880 PTPRTO14522 1441 aa9.25□□□□□ -0.93
TDP1-213ENST00000555880 PLEKHG5O94827 1062 aa9.25□□□□□ -0.93
TDP1-213ENST00000555880 WDR43Q15061 677 aaKnown RBP eCLIP9.25□□□□□ -0.93
TDP1-213ENST00000555880 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
TDP1-213ENST00000555880 EXOC6Q8TAG9 804 aa9.25□□□□□ -0.93
TDP1-213ENST00000555880 INO80Q9ULG1 1556 aaPredicted RBP9.25□□□□□ -0.93
TDP1-213ENST00000555880 TCERG1O14776 1098 aaKnown RBP9.24□□□□□ -0.93
TDP1-213ENST00000555880 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
TDP1-213ENST00000555880 FANCAO15360 1455 aa9.24□□□□□ -0.93
TDP1-213ENST00000555880 KDM5AP29375 1690 aaKnown RBP9.24□□□□□ -0.93
TDP1-213ENST00000555880 NEURL4Q96JN8 1562 aa9.24□□□□□ -0.93
TDP1-213ENST00000555880 ABCA9Q8IUA7 1624 aa9.24□□□□□ -0.93
TDP1-213ENST00000555880 ASXL1Q8IXJ9 1541 aa9.23□□□□□ -0.93
TDP1-213ENST00000555880 LHX8Q68G74 356 aa9.23□□□□□ -0.93
TDP1-213ENST00000555880 AFAP1Q8N556 730 aa9.23□□□□□ -0.93
TDP1-213ENST00000555880 IPO9Q96P70 1041 aaKnown RBP9.23□□□□□ -0.93
TDP1-213ENST00000555880 KIF1BO60333 1816 aa9.23□□□□□ -0.93
TDP1-213ENST00000555880 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
TDP1-213ENST00000555880 VWDEQ8N2E2 1590 aa9.22□□□□□ -0.93
TDP1-213ENST00000555880 PPP2R1AP30153 589 aa9.21□□□□□ -0.93
TDP1-213ENST00000555880 CYB5RLQ6IPT4 315 aa9.21□□□□□ -0.93
TDP1-213ENST00000555880 MS4A3Q96HJ5 214 aa9.21□□□□□ -0.93
TDP1-213ENST00000555880 MYOM1P52179 1685 aa9.21□□□□□ -0.93
TDP1-213ENST00000555880 MS4A1P11836 297 aa9.21□□□□□ -0.94
TDP1-213ENST00000555880 RASEFQ8IZ41 740 aa9.21□□□□□ -0.94
TDP1-213ENST00000555880 ZBTB47Q9UFB7 747 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms