RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
IFT43-211ENST00000555677 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
IFT43-211ENST00000555677 KIF1BO60333 1816 aa22.59■■□□□ 1.21
IFT43-211ENST00000555677 XIRP1Q702N8 1843 aaKnown RBP22.59■■□□□ 1.21
IFT43-211ENST00000555677 LRRC7Q96NW7 1537 aa22.58■■□□□ 1.21
IFT43-211ENST00000555677 CLTCL1P53675 1640 aa22.58■■□□□ 1.21
IFT43-211ENST00000555677 BCANQ96GW7 911 aa22.58■■□□□ 1.21
IFT43-211ENST00000555677 PPP1R15AO75807 674 aaPredicted RBP22.57■■□□□ 1.2
IFT43-211ENST00000555677 NUTM2DQ5VT03 806 aaPredicted RBP22.57■■□□□ 1.2
IFT43-211ENST00000555677 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.57■■□□□ 1.2
IFT43-211ENST00000555677 TRPM2O94759 1503 aa22.57■■□□□ 1.2
IFT43-211ENST00000555677 PLEKHG1Q9ULL1 1385 aa22.56■■□□□ 1.2
IFT43-211ENST00000555677 CHD2O14647 1828 aaKnown RBP22.54■■□□□ 1.2
IFT43-211ENST00000555677 TOM1O60784 492 aa22.53■■□□□ 1.2
IFT43-211ENST00000555677 KCNA6P17658 529 aa22.53■■□□□ 1.2
IFT43-211ENST00000555677 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
IFT43-211ENST00000555677 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
IFT43-211ENST00000555677 FOXD1Q16676 465 aa22.5■■□□□ 1.19
IFT43-211ENST00000555677 MPHOSPH9Q99550 1183 aa22.5■■□□□ 1.19
IFT43-211ENST00000555677 TBX22Q9Y458 520 aa22.5■■□□□ 1.19
IFT43-211ENST00000555677 ALKQ9UM73 1620 aa22.49■■□□□ 1.19
IFT43-211ENST00000555677 NWD1Q149M9 1564 aa22.47■■□□□ 1.19
IFT43-211ENST00000555677 PIP4K2BP78356 416 aa22.47■■□□□ 1.19
IFT43-211ENST00000555677 ADAMTS13Q76LX8 1427 aa22.47■■□□□ 1.19
IFT43-211ENST00000555677 PROSER2Q86WR7 435 aaPredicted RBP22.45■■□□□ 1.18
IFT43-211ENST00000555677 ACIN1Q9UKV3 1341 aaKnown RBP22.45■■□□□ 1.18
IFT43-211ENST00000555677 NEXMIFQ5QGS0 1516 aa22.45■■□□□ 1.18
IFT43-211ENST00000555677 DIP2AQ14689 1571 aa22.44■■□□□ 1.18
IFT43-211ENST00000555677 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
IFT43-211ENST00000555677 NRXN3Q9Y4C0 1643 aa22.44■■□□□ 1.18
IFT43-211ENST00000555677 RAB3GAP2Q9H2M9 1393 aa22.43■■□□□ 1.18
IFT43-211ENST00000555677 RBM33Q96EV2 1170 aaKnown RBP22.43■■□□□ 1.18
IFT43-211ENST00000555677 TMEM94Q12767 1356 aa22.42■■□□□ 1.18
IFT43-211ENST00000555677 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
IFT43-211ENST00000555677 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
IFT43-211ENST00000555677 PPLO60437 1756 aa22.39■■□□□ 1.17
IFT43-211ENST00000555677 PIK3R4Q99570 1358 aa22.38■■□□□ 1.17
IFT43-211ENST00000555677 HSPA1LP34931 641 aa22.36■■□□□ 1.17
IFT43-211ENST00000555677 RPGRIP1LQ68CZ1 1315 aa22.35■■□□□ 1.17
IFT43-211ENST00000555677 CCDC144AA2RUR9 1427 aa22.35■■□□□ 1.17
IFT43-211ENST00000555677 PTPRUQ92729 1446 aa22.35■■□□□ 1.17
IFT43-211ENST00000555677 VGFO15240 615 aaPredicted RBP22.35■■□□□ 1.17
IFT43-211ENST00000555677 AMOTL2Q9Y2J4 779 aa22.35■■□□□ 1.17
IFT43-211ENST00000555677 METP08581 1390 aa22.32■■□□□ 1.16
IFT43-211ENST00000555677 HRCP23327 699 aa22.31■■□□□ 1.16
IFT43-211ENST00000555677 RGL3Q3MIN7 710 aa22.31■■□□□ 1.16
IFT43-211ENST00000555677 SETD1AO15047 1707 aaKnown RBP22.31■■□□□ 1.16
IFT43-211ENST00000555677 IFT172Q9UG01 1749 aa22.31■■□□□ 1.16
IFT43-211ENST00000555677 XRN1Q8IZH2 1706 aaKnown RBP22.3■■□□□ 1.16
IFT43-211ENST00000555677 SPATA31E1Q6ZUB1 1445 aa22.3■■□□□ 1.16
IFT43-211ENST00000555677 NCOA3Q9Y6Q9 1424 aa22.3■■□□□ 1.16
IFT43-211ENST00000555677 MSH6P52701 1360 aa22.29■■□□□ 1.16
IFT43-211ENST00000555677 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.28■■□□□ 1.16
IFT43-211ENST00000555677 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
IFT43-211ENST00000555677 FAM135BQ49AJ0 1406 aa22.25■■□□□ 1.15
IFT43-211ENST00000555677 C14orf37Q86TY3 774 aa22.24■■□□□ 1.15
IFT43-211ENST00000555677 SLAIN2Q9P270 581 aa22.24■■□□□ 1.15
IFT43-211ENST00000555677 ADGRF5Q8IZF2 1346 aa22.24■■□□□ 1.15
IFT43-211ENST00000555677 C19orf44Q9H6X5 657 aa22.23■■□□□ 1.15
IFT43-211ENST00000555677 ANKRD30BQ9BXX2 1392 aa22.21■■□□□ 1.15
IFT43-211ENST00000555677 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
IFT43-211ENST00000555677 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
IFT43-211ENST00000555677 ATF3P18847 181 aa22.17■■□□□ 1.14
IFT43-211ENST00000555677 NALCNQ8IZF0 1738 aa22.15■■□□□ 1.14
IFT43-211ENST00000555677 PHLPP1O60346 1717 aa22.13■■□□□ 1.13
IFT43-211ENST00000555677 PIK3C2GO75747 1445 aa22.13■■□□□ 1.13
IFT43-211ENST00000555677 ROBO2Q9HCK4 1378 aa22.12■■□□□ 1.13
IFT43-211ENST00000555677 DCCP43146 1447 aa22.11■■□□□ 1.13
IFT43-211ENST00000555677 PTCH1Q13635 1447 aa22.11■■□□□ 1.13
IFT43-211ENST00000555677 MED1Q15648 1581 aaPredicted RBP22.11■■□□□ 1.13
IFT43-211ENST00000555677 TMEM132EQ6IEE7 984 aa22.1■■□□□ 1.13
IFT43-211ENST00000555677 PRAG1Q86YV5 1406 aa22.1■■□□□ 1.13
IFT43-211ENST00000555677 NRXN1Q9ULB1 1477 aa22.09■■□□□ 1.13
IFT43-211ENST00000555677 ADGRL3Q9HAR2 1447 aa22.09■■□□□ 1.13
IFT43-211ENST00000555677 MYOM2P54296 1465 aa22.09■■□□□ 1.13
IFT43-211ENST00000555677 C14orf93Q9H972 538 aaKnown RBP22.08■■□□□ 1.13
IFT43-211ENST00000555677 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
IFT43-211ENST00000555677 STK26Q9P289 416 aa22.07■■□□□ 1.12
IFT43-211ENST00000555677 MST1RQ04912 1400 aa22.06■■□□□ 1.12
IFT43-211ENST00000555677 KNDC1Q76NI1 1749 aa22.06■■□□□ 1.12
IFT43-211ENST00000555677 CFAP70Q5T0N1 1121 aa22.05■■□□□ 1.12
IFT43-211ENST00000555677 ILDR2Q71H61 639 aa22.05■■□□□ 1.12
IFT43-211ENST00000555677 DCAF11Q8TEB1 546 aa22.05■■□□□ 1.12
IFT43-211ENST00000555677 LAMC1P11047 1609 aa22.05■■□□□ 1.12
IFT43-211ENST00000555677 LRPPRCP42704 1394 aaKnown RBP22.04■■□□□ 1.12
IFT43-211ENST00000555677 BRINP3Q76B58 766 aa22.04■■□□□ 1.12
IFT43-211ENST00000555677 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
IFT43-211ENST00000555677 COL16A1Q07092 1604 aaPredicted RBP22.03■■□□□ 1.12
IFT43-211ENST00000555677 ABCC11Q96J66 1382 aa22.03■■□□□ 1.12
IFT43-211ENST00000555677 WAPLQ7Z5K2 1190 aa22.03■■□□□ 1.12
IFT43-211ENST00000555677 TECPR2O15040 1411 aa22.02■■□□□ 1.12
IFT43-211ENST00000555677 YTHDC2Q9H6S0 1430 aaKnown RBP22.02■■□□□ 1.12
IFT43-211ENST00000555677 AHDC1Q5TGY3 1603 aaPredicted RBP22.02■■□□□ 1.11
IFT43-211ENST00000555677 DHX57Q6P158 1386 aaKnown RBP21.99■■□□□ 1.11
IFT43-211ENST00000555677 STAC3Q96MF2 364 aa21.99■■□□□ 1.11
IFT43-211ENST00000555677 NHSL1Q5SYE7 1610 aa21.98■■□□□ 1.11
IFT43-211ENST00000555677 C1orf167Q5SNV9 1468 aa21.98■■□□□ 1.11
IFT43-211ENST00000555677 SIRT1Q96EB6 747 aa21.97■■□□□ 1.11
IFT43-211ENST00000555677 PLEKHH1Q9ULM0 1364 aa21.97■■□□□ 1.11
IFT43-211ENST00000555677 JCADQ9P266 1359 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms