RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 ZFYVE16Q7Z3T8 1539 aa21.42■■□□□ 1.02
TUBB3-209ENST00000555609 EXOC6Q8TAG9 804 aa21.42■■□□□ 1.02
TUBB3-209ENST00000555609 KIAA1210Q9ULL0 1709 aa21.42■■□□□ 1.02
TUBB3-209ENST00000555609 TET3O43151 1660 aa21.41■■□□□ 1.02
TUBB3-209ENST00000555609 EIF3AQ14152 1382 aaKnown RBP21.41■■□□□ 1.02
TUBB3-209ENST00000555609 KNSTRNQ9Y448 316 aa21.41■■□□□ 1.02
TUBB3-209ENST00000555609 KANK1Q14678 1352 aa21.4■■□□□ 1.02
TUBB3-209ENST00000555609 VWDEQ8N2E2 1590 aa21.39■■□□□ 1.01
TUBB3-209ENST00000555609 KIF13AQ9H1H9 1805 aa21.38■■□□□ 1.01
TUBB3-209ENST00000555609 PIK3C2GO75747 1445 aa21.37■■□□□ 1.01
TUBB3-209ENST00000555609 FAM69CQ0P6D2 419 aa21.37■■□□□ 1.01
TUBB3-209ENST00000555609 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
TUBB3-209ENST00000555609 ASXL1Q8IXJ9 1541 aa21.35■■□□□ 1.01
TUBB3-209ENST00000555609 CLTCL1P53675 1640 aa21.35■■□□□ 1.01
TUBB3-209ENST00000555609 PPP2R1AP30153 589 aa21.35■■□□□ 1.01
TUBB3-209ENST00000555609 AMER1Q5JTC6 1135 aaPredicted RBP21.35■■□□□ 1.01
TUBB3-209ENST00000555609 CDCA7LQ96GN5 454 aa21.35■■□□□ 1.01
TUBB3-209ENST00000555609 INO80Q9ULG1 1556 aaPredicted RBP21.34■■□□□ 1.01
TUBB3-209ENST00000555609 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1.01
TUBB3-209ENST00000555609 ZBTB47Q9UFB7 747 aaPredicted RBP21.33■■□□□ 1.01
TUBB3-209ENST00000555609 SALL2Q9Y467 1007 aaPredicted RBP21.33■■□□□ 1.01
TUBB3-209ENST00000555609 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 1
TUBB3-209ENST00000555609 ABCA9Q8IUA7 1624 aa21.32■■□□□ 1
TUBB3-209ENST00000555609 ATP7AQ04656 1500 aa21.32■■□□□ 1
TUBB3-209ENST00000555609 MYOM2P54296 1465 aa21.32■■□□□ 1
TUBB3-209ENST00000555609 NGEFQ8N5V2 710 aa21.31■■□□□ 1
TUBB3-209ENST00000555609 ADAMTS8Q9UP79 889 aa21.31■■□□□ 1
TUBB3-209ENST00000555609 AFAP1Q8N556 730 aa21.29■■□□□ 1
TUBB3-209ENST00000555609 TSPOAP1O95153 1857 aa21.29■■□□□ 1
TUBB3-209ENST00000555609 ZNF521Q96K83 1311 aa21.28■■□□□ 1
TUBB3-209ENST00000555609 PDE4AP27815 886 aa21.28■■□□□ 1
TUBB3-209ENST00000555609 BACH2Q9BYV9 841 aa21.28■■□□□ 1
TUBB3-209ENST00000555609 BCL11AQ9H165 835 aa21.28■■□□□ 1
TUBB3-209ENST00000555609 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.27■■□□□ 1
TUBB3-209ENST00000555609 KDM5AP29375 1690 aaKnown RBP21.27■■□□□ 1
TUBB3-209ENST00000555609 FANCAO15360 1455 aa21.27■□□□□ 0.99
TUBB3-209ENST00000555609 PAK3O75914 559 aaPredicted RBP21.26■□□□□ 0.99
TUBB3-209ENST00000555609 MAP3K4Q9Y6R4 1608 aa21.25■□□□□ 0.99
TUBB3-209ENST00000555609 GOLGA2Q08379 1002 aa21.24■□□□□ 0.99
TUBB3-209ENST00000555609 MYOM1P52179 1685 aa21.24■□□□□ 0.99
TUBB3-209ENST00000555609 DUSP27Q5VZP5 1158 aa21.24■□□□□ 0.99
TUBB3-209ENST00000555609 CRBNQ96SW2 442 aa21.24■□□□□ 0.99
TUBB3-209ENST00000555609 LMTK2Q8IWU2 1503 aa21.23■□□□□ 0.99
TUBB3-209ENST00000555609 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
TUBB3-209ENST00000555609 PLEKHH1Q9ULM0 1364 aa21.21■□□□□ 0.99
TUBB3-209ENST00000555609 NRXN1Q9ULB1 1477 aa21.21■□□□□ 0.99
TUBB3-209ENST00000555609 MROH1Q8NDA8 1641 aa21.2■□□□□ 0.98
TUBB3-209ENST00000555609 TRMT2AQ8IZ69 625 aaKnown RBP21.2■□□□□ 0.98
TUBB3-209ENST00000555609 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
TUBB3-209ENST00000555609 KIF3BO15066 747 aa21.2■□□□□ 0.98
TUBB3-209ENST00000555609 EFCAB6Q5THR3 1501 aa21.19■□□□□ 0.98
TUBB3-209ENST00000555609 GLI2P10070 1586 aa21.19■□□□□ 0.98
TUBB3-209ENST00000555609 MYO3AQ8NEV4 1616 aa21.19■□□□□ 0.98
TUBB3-209ENST00000555609 SLFN5Q08AF3 891 aa21.19■□□□□ 0.98
TUBB3-209ENST00000555609 CENPQQ7L2Z9 268 aaPredicted RBP21.19■□□□□ 0.98
TUBB3-209ENST00000555609 KIF1BO60333 1816 aa21.18■□□□□ 0.98
TUBB3-209ENST00000555609 PLIN1O60240 522 aa21.18■□□□□ 0.98
TUBB3-209ENST00000555609 ERVK-7P63135 1459 aa21.17■□□□□ 0.98
TUBB3-209ENST00000555609 IFT172Q9UG01 1749 aa21.17■□□□□ 0.98
TUBB3-209ENST00000555609 KDM2BQ8NHM5 1336 aa21.17■□□□□ 0.98
TUBB3-209ENST00000555609 SETBP1Q9Y6X0 1596 aa21.17■□□□□ 0.98
TUBB3-209ENST00000555609 ABCA6Q8N139 1617 aa21.17■□□□□ 0.98
TUBB3-209ENST00000555609 DDRGK1Q96HY6 314 aa21.16■□□□□ 0.98
TUBB3-209ENST00000555609 DEKP35659 375 aaKnown RBP21.15■□□□□ 0.98
TUBB3-209ENST00000555609 PPRC1Q5VV67 1664 aaKnown RBP21.15■□□□□ 0.98
TUBB3-209ENST00000555609 RTL5Q5HYW3 569 aaPredicted RBP21.14■□□□□ 0.97
TUBB3-209ENST00000555609 CD109Q6YHK3 1445 aa21.14■□□□□ 0.97
TUBB3-209ENST00000555609 E9PSI1 815 aa21.13■□□□□ 0.97
TUBB3-209ENST00000555609 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
TUBB3-209ENST00000555609 USP35Q9P2H5 1018 aa21.12■□□□□ 0.97
TUBB3-209ENST00000555609 NKTRP30414 1462 aaKnown RBP21.12■□□□□ 0.97
TUBB3-209ENST00000555609 POLR3AO14802 1390 aaPredicted RBP21.12■□□□□ 0.97
TUBB3-209ENST00000555609 ZNF518AQ6AHZ1 1483 aa21.11■□□□□ 0.97
TUBB3-209ENST00000555609 ADGRB3O60242 1522 aa21.1■□□□□ 0.97
TUBB3-209ENST00000555609 ADGRF5Q8IZF2 1346 aa21.1■□□□□ 0.97
TUBB3-209ENST00000555609 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
TUBB3-209ENST00000555609 RPGRIP1LQ68CZ1 1315 aa21.09■□□□□ 0.97
TUBB3-209ENST00000555609 KIDINS220Q9ULH0 1771 aa21.09■□□□□ 0.97
TUBB3-209ENST00000555609 PPM1GO15355 546 aaPredicted RBP21.08■□□□□ 0.97
TUBB3-209ENST00000555609 NBR1Q14596 966 aa21.08■□□□□ 0.97
TUBB3-209ENST00000555609 C20orf194Q5TEA3 1177 aa21.08■□□□□ 0.97
TUBB3-209ENST00000555609 PUS7Q96PZ0 661 aaKnown RBP21.07■□□□□ 0.96
TUBB3-209ENST00000555609 CFAP74Q9C0B2 1584 aa21.07■□□□□ 0.96
TUBB3-209ENST00000555609 NPM2Q86SE8 214 aaKnown RBP21.06■□□□□ 0.96
TUBB3-209ENST00000555609 CENPJQ9HC77 1338 aaPredicted RBP21.06■□□□□ 0.96
TUBB3-209ENST00000555609 CARD14Q9BXL6 1004 aa21.05■□□□□ 0.96
TUBB3-209ENST00000555609 APAF1O14727 1248 aa21.05■□□□□ 0.96
TUBB3-209ENST00000555609 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
TUBB3-209ENST00000555609 UGGT1Q9NYU2 1555 aa21.04■□□□□ 0.96
TUBB3-209ENST00000555609 C14orf93Q9H972 538 aaKnown RBP21.03■□□□□ 0.96
TUBB3-209ENST00000555609 MLH3Q9UHC1 1453 aa21.03■□□□□ 0.96
TUBB3-209ENST00000555609 MROH2AA6NES4 1674 aa21.03■□□□□ 0.96
TUBB3-209ENST00000555609 PDE3AQ14432 1141 aa21.03■□□□□ 0.96
TUBB3-209ENST00000555609 FAM161AQ3B820 660 aa21.03■□□□□ 0.96
TUBB3-209ENST00000555609 USP32Q8NFA0 1604 aa21.02■□□□□ 0.96
TUBB3-209ENST00000555609 AAMPQ13685 434 aa21.02■□□□□ 0.96
TUBB3-209ENST00000555609 NOS1P29475 1434 aa21.01■□□□□ 0.95
TUBB3-209ENST00000555609 CCDC146Q8IYE0 955 aa21■□□□□ 0.95
TUBB3-209ENST00000555609 CGNL1Q0VF96 1302 aa21■□□□□ 0.95
TUBB3-209ENST00000555609 PPLO60437 1756 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms