RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
SNX6-203ENST00000555416 CLTCL1P53675 1640 aa20.49■□□□□ 0.87
SNX6-203ENST00000555416 TRPM2O94759 1503 aa20.48■□□□□ 0.87
SNX6-203ENST00000555416 IQSEC2Q5JU85 1478 aa20.46■□□□□ 0.87
SNX6-203ENST00000555416 SLC26A8Q96RN1 970 aa20.46■□□□□ 0.87
SNX6-203ENST00000555416 CPS1P31327 1500 aa20.45■□□□□ 0.86
SNX6-203ENST00000555416 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
SNX6-203ENST00000555416 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
SNX6-203ENST00000555416 PLEKHG1Q9ULL1 1385 aa20.43■□□□□ 0.86
SNX6-203ENST00000555416 PPP1R15AO75807 674 aaPredicted RBP20.41■□□□□ 0.86
SNX6-203ENST00000555416 LRRC7Q96NW7 1537 aa20.41■□□□□ 0.86
SNX6-203ENST00000555416 BCANQ96GW7 911 aa20.39■□□□□ 0.85
SNX6-203ENST00000555416 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
SNX6-203ENST00000555416 ADAMTS13Q76LX8 1427 aa20.37■□□□□ 0.85
SNX6-203ENST00000555416 UBAP1LF5GYI3 381 aa20.37■□□□□ 0.85
SNX6-203ENST00000555416 ZNF326Q5BKZ1 582 aaKnown RBP20.37■□□□□ 0.85
SNX6-203ENST00000555416 HDGFP51858 240 aaKnown RBP20.36■□□□□ 0.85
SNX6-203ENST00000555416 ALKQ9UM73 1620 aa20.35■□□□□ 0.85
SNX6-203ENST00000555416 KIF1BO60333 1816 aa20.35■□□□□ 0.85
SNX6-203ENST00000555416 NEXMIFQ5QGS0 1516 aa20.35■□□□□ 0.85
SNX6-203ENST00000555416 KCNA6P17658 529 aa20.34■□□□□ 0.85
SNX6-203ENST00000555416 XIRP1Q702N8 1843 aaKnown RBP20.34■□□□□ 0.85
SNX6-203ENST00000555416 RBM33Q96EV2 1170 aaKnown RBP20.33■□□□□ 0.85
SNX6-203ENST00000555416 TBX22Q9Y458 520 aa20.33■□□□□ 0.85
SNX6-203ENST00000555416 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.84
SNX6-203ENST00000555416 NWD1Q149M9 1564 aa20.32■□□□□ 0.84
SNX6-203ENST00000555416 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
SNX6-203ENST00000555416 CCDC144AA2RUR9 1427 aa20.29■□□□□ 0.84
SNX6-203ENST00000555416 TMEM94Q12767 1356 aa20.29■□□□□ 0.84
SNX6-203ENST00000555416 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
SNX6-203ENST00000555416 PTPRUQ92729 1446 aa20.28■□□□□ 0.84
SNX6-203ENST00000555416 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.84
SNX6-203ENST00000555416 DIP2AQ14689 1571 aa20.27■□□□□ 0.84
SNX6-203ENST00000555416 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
SNX6-203ENST00000555416 ACIN1Q9UKV3 1341 aaKnown RBP20.27■□□□□ 0.83
SNX6-203ENST00000555416 HRCP23327 699 aa20.26■□□□□ 0.83
SNX6-203ENST00000555416 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
SNX6-203ENST00000555416 NKTRP30414 1462 aaKnown RBP20.25■□□□□ 0.83
SNX6-203ENST00000555416 METP08581 1390 aa20.25■□□□□ 0.83
SNX6-203ENST00000555416 RGL3Q3MIN7 710 aa20.25■□□□□ 0.83
SNX6-203ENST00000555416 PPLO60437 1756 aa20.24■□□□□ 0.83
SNX6-203ENST00000555416 TOM1O60784 492 aa20.24■□□□□ 0.83
SNX6-203ENST00000555416 RPGRIP1LQ68CZ1 1315 aa20.23■□□□□ 0.83
SNX6-203ENST00000555416 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
SNX6-203ENST00000555416 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
SNX6-203ENST00000555416 ANKRD30BQ9BXX2 1392 aa20.21■□□□□ 0.83
SNX6-203ENST00000555416 AMOTL2Q9Y2J4 779 aa20.21■□□□□ 0.83
SNX6-203ENST00000555416 ADGRF5Q8IZF2 1346 aa20.21■□□□□ 0.83
SNX6-203ENST00000555416 VGFO15240 615 aaPredicted RBP20.2■□□□□ 0.82
SNX6-203ENST00000555416 SETD1AO15047 1707 aaKnown RBP20.19■□□□□ 0.82
SNX6-203ENST00000555416 XRN1Q8IZH2 1706 aaKnown RBP20.19■□□□□ 0.82
SNX6-203ENST00000555416 IFT172Q9UG01 1749 aa20.18■□□□□ 0.82
SNX6-203ENST00000555416 HSPA1LP34931 641 aa20.17■□□□□ 0.82
SNX6-203ENST00000555416 MSH6P52701 1360 aa20.12■□□□□ 0.81
SNX6-203ENST00000555416 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
SNX6-203ENST00000555416 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.09■□□□□ 0.81
SNX6-203ENST00000555416 PIK3C2GO75747 1445 aa20.09■□□□□ 0.81
SNX6-203ENST00000555416 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.81
SNX6-203ENST00000555416 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.81
SNX6-203ENST00000555416 C14orf37Q86TY3 774 aa20.08■□□□□ 0.81
SNX6-203ENST00000555416 NRXN1Q9ULB1 1477 aa20.07■□□□□ 0.8
SNX6-203ENST00000555416 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
SNX6-203ENST00000555416 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
SNX6-203ENST00000555416 C19orf44Q9H6X5 657 aa20.06■□□□□ 0.8
SNX6-203ENST00000555416 SLAIN2Q9P270 581 aa20.06■□□□□ 0.8
SNX6-203ENST00000555416 MYOM2P54296 1465 aa20.05■□□□□ 0.8
SNX6-203ENST00000555416 ROBO1Q9Y6N7 1651 aa20.05■□□□□ 0.8
SNX6-203ENST00000555416 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
SNX6-203ENST00000555416 PTCH1Q13635 1447 aa20.03■□□□□ 0.8
SNX6-203ENST00000555416 PRAG1Q86YV5 1406 aa20.03■□□□□ 0.8
SNX6-203ENST00000555416 CFAP70Q5T0N1 1121 aa20.03■□□□□ 0.8
SNX6-203ENST00000555416 NALCNQ8IZF0 1738 aa20.02■□□□□ 0.8
SNX6-203ENST00000555416 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
SNX6-203ENST00000555416 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
SNX6-203ENST00000555416 STK26Q9P289 416 aa20.02■□□□□ 0.8
SNX6-203ENST00000555416 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
SNX6-203ENST00000555416 DCAF11Q8TEB1 546 aa20.01■□□□□ 0.79
SNX6-203ENST00000555416 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
SNX6-203ENST00000555416 ATF3P18847 181 aa20■□□□□ 0.79
SNX6-203ENST00000555416 CADPS2Q86UW7 1296 aa20■□□□□ 0.79
SNX6-203ENST00000555416 LRPPRCP42704 1394 aaKnown RBP19.99■□□□□ 0.79
SNX6-203ENST00000555416 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
SNX6-203ENST00000555416 DCCP43146 1447 aa19.98■□□□□ 0.79
SNX6-203ENST00000555416 TECPR2O15040 1411 aa19.97■□□□□ 0.79
SNX6-203ENST00000555416 MST1RQ04912 1400 aa19.97■□□□□ 0.79
SNX6-203ENST00000555416 YTHDC2Q9H6S0 1430 aaKnown RBP19.97■□□□□ 0.79
SNX6-203ENST00000555416 ABCC11Q96J66 1382 aa19.96■□□□□ 0.79
SNX6-203ENST00000555416 PLEKHH1Q9ULM0 1364 aa19.96■□□□□ 0.79
SNX6-203ENST00000555416 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.78
SNX6-203ENST00000555416 BRINP3Q76B58 766 aa19.94■□□□□ 0.78
SNX6-203ENST00000555416 LAMC1P11047 1609 aa19.94■□□□□ 0.78
SNX6-203ENST00000555416 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
SNX6-203ENST00000555416 ADGRB1O14514 1584 aa19.93■□□□□ 0.78
SNX6-203ENST00000555416 DISP3Q9P2K9 1392 aa19.93■□□□□ 0.78
SNX6-203ENST00000555416 PHLPP1O60346 1717 aa19.91■□□□□ 0.78
SNX6-203ENST00000555416 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
SNX6-203ENST00000555416 COL16A1Q07092 1604 aaPredicted RBP19.89■□□□□ 0.77
SNX6-203ENST00000555416 C1orf167Q5SNV9 1468 aa19.89■□□□□ 0.77
SNX6-203ENST00000555416 DDX17Q92841 729 aaKnown RBP19.88■□□□□ 0.77
SNX6-203ENST00000555416 AHDC1Q5TGY3 1603 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms