RNA–Protein interactions for RNA: ENST00000554325.1

APEX1-207, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-207ENST00000554325 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.58■□□□□ 0.56
APEX1-207ENST00000554325 ARHGAP23Q9P227 1491 aa18.58■□□□□ 0.56
APEX1-207ENST00000554325 NPHP4O75161 1426 aaPredicted RBP18.56■□□□□ 0.56
APEX1-207ENST00000554325 ANKRD30BQ9BXX2 1392 aa18.55■□□□□ 0.56
APEX1-207ENST00000554325 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
APEX1-207ENST00000554325 LTKP29376 864 aa18.53■□□□□ 0.56
APEX1-207ENST00000554325 RGL3Q3MIN7 710 aa18.53■□□□□ 0.56
APEX1-207ENST00000554325 NUTM2DQ5VT03 806 aaPredicted RBP18.53■□□□□ 0.56
APEX1-207ENST00000554325 NEURL4Q96JN8 1562 aa18.53■□□□□ 0.56
APEX1-207ENST00000554325 DHX57Q6P158 1386 aaKnown RBP18.53■□□□□ 0.56
APEX1-207ENST00000554325 ZFYVE9O95405 1425 aa18.52■□□□□ 0.56
APEX1-207ENST00000554325 MED14O60244 1454 aa18.52■□□□□ 0.55
APEX1-207ENST00000554325 RPGRIP1LQ68CZ1 1315 aa18.5■□□□□ 0.55
APEX1-207ENST00000554325 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
APEX1-207ENST00000554325 NEXMIFQ5QGS0 1516 aa18.49■□□□□ 0.55
APEX1-207ENST00000554325 PLEKHG1Q9ULL1 1385 aa18.48■□□□□ 0.55
APEX1-207ENST00000554325 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
APEX1-207ENST00000554325 SPATA31E1Q6ZUB1 1445 aa18.48■□□□□ 0.55
APEX1-207ENST00000554325 PPLO60437 1756 aa18.46■□□□□ 0.55
APEX1-207ENST00000554325 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
APEX1-207ENST00000554325 SLC26A8Q96RN1 970 aa18.43■□□□□ 0.54
APEX1-207ENST00000554325 IFT172Q9UG01 1749 aa18.42■□□□□ 0.54
APEX1-207ENST00000554325 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
APEX1-207ENST00000554325 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
APEX1-207ENST00000554325 SIN3AQ96ST3 1273 aa18.4■□□□□ 0.54
APEX1-207ENST00000554325 SETBP1Q9Y6X0 1596 aa18.39■□□□□ 0.53
APEX1-207ENST00000554325 DCAF11Q8TEB1 546 aa18.39■□□□□ 0.53
APEX1-207ENST00000554325 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
APEX1-207ENST00000554325 ZNF335Q9H4Z2 1342 aaPredicted RBP18.39■□□□□ 0.53
APEX1-207ENST00000554325 MYOM2P54296 1465 aa18.38■□□□□ 0.53
APEX1-207ENST00000554325 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
APEX1-207ENST00000554325 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
APEX1-207ENST00000554325 STAC3Q96MF2 364 aa18.36■□□□□ 0.53
APEX1-207ENST00000554325 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
APEX1-207ENST00000554325 TONSLQ96HA7 1378 aa18.35■□□□□ 0.53
APEX1-207ENST00000554325 CPS1P31327 1500 aa18.34■□□□□ 0.53
APEX1-207ENST00000554325 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
APEX1-207ENST00000554325 PIK3R4Q99570 1358 aa18.33■□□□□ 0.53
APEX1-207ENST00000554325 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.53
APEX1-207ENST00000554325 ALKQ9UM73 1620 aa18.32■□□□□ 0.52
APEX1-207ENST00000554325 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
APEX1-207ENST00000554325 LAMC1P11047 1609 aa18.31■□□□□ 0.52
APEX1-207ENST00000554325 KCNA6P17658 529 aa18.31■□□□□ 0.52
APEX1-207ENST00000554325 LTBP4Q8N2S1 1624 aa18.3■□□□□ 0.52
APEX1-207ENST00000554325 CHD2O14647 1828 aaKnown RBP18.29■□□□□ 0.52
APEX1-207ENST00000554325 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
APEX1-207ENST00000554325 NKTRP30414 1462 aaKnown RBP18.28■□□□□ 0.52
APEX1-207ENST00000554325 NRXN1Q9ULB1 1477 aa18.28■□□□□ 0.52
APEX1-207ENST00000554325 CERKQ8TCT0 537 aa18.28■□□□□ 0.52
APEX1-207ENST00000554325 NWD1Q149M9 1564 aa18.28■□□□□ 0.52
APEX1-207ENST00000554325 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.52
APEX1-207ENST00000554325 METP08581 1390 aa18.27■□□□□ 0.51
APEX1-207ENST00000554325 STRCP1A6NGW2 1772 aa18.27■□□□□ 0.51
APEX1-207ENST00000554325 AMOTL2Q9Y2J4 779 aa18.26■□□□□ 0.51
APEX1-207ENST00000554325 SETD1AO15047 1707 aaKnown RBP18.26■□□□□ 0.51
APEX1-207ENST00000554325 CFAP70Q5T0N1 1121 aa18.25■□□□□ 0.51
APEX1-207ENST00000554325 C14orf37Q86TY3 774 aa18.25■□□□□ 0.51
APEX1-207ENST00000554325 C14orf93Q9H972 538 aaKnown RBP18.25■□□□□ 0.51
APEX1-207ENST00000554325 STK26Q9P289 416 aa18.23■□□□□ 0.51
APEX1-207ENST00000554325 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
APEX1-207ENST00000554325 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
APEX1-207ENST00000554325 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
APEX1-207ENST00000554325 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
APEX1-207ENST00000554325 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
APEX1-207ENST00000554325 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
APEX1-207ENST00000554325 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
APEX1-207ENST00000554325 TMEM94Q12767 1356 aa18.2■□□□□ 0.5
APEX1-207ENST00000554325 KIAA1210Q9ULL0 1709 aa18.2■□□□□ 0.5
APEX1-207ENST00000554325 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
APEX1-207ENST00000554325 YTHDC2Q9H6S0 1430 aaKnown RBP18.19■□□□□ 0.5
APEX1-207ENST00000554325 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
APEX1-207ENST00000554325 MSH6P52701 1360 aa18.17■□□□□ 0.5
APEX1-207ENST00000554325 PTCH1Q13635 1447 aa18.17■□□□□ 0.5
APEX1-207ENST00000554325 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
APEX1-207ENST00000554325 TIMELESSQ9UNS1 1208 aa18.17■□□□□ 0.5
APEX1-207ENST00000554325 KNDC1Q76NI1 1749 aa18.17■□□□□ 0.5
APEX1-207ENST00000554325 UBAP1LF5GYI3 381 aa18.15■□□□□ 0.5
APEX1-207ENST00000554325 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
APEX1-207ENST00000554325 ABCC11Q96J66 1382 aa18.15■□□□□ 0.5
APEX1-207ENST00000554325 NCOA3Q9Y6Q9 1424 aa18.15■□□□□ 0.5
APEX1-207ENST00000554325 POGKQ9P215 609 aa18.14■□□□□ 0.49
APEX1-207ENST00000554325 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
APEX1-207ENST00000554325 XIRP1Q702N8 1843 aaKnown RBP18.14■□□□□ 0.49
APEX1-207ENST00000554325 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
APEX1-207ENST00000554325 TRPM1Q7Z4N2 1603 aa18.13■□□□□ 0.49
APEX1-207ENST00000554325 TOM1O60784 492 aa18.13■□□□□ 0.49
APEX1-207ENST00000554325 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
APEX1-207ENST00000554325 TECPR2O15040 1411 aa18.13■□□□□ 0.49
APEX1-207ENST00000554325 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
APEX1-207ENST00000554325 ATF3P18847 181 aa18.11■□□□□ 0.49
APEX1-207ENST00000554325 NBPF1Q3BBV0 1214 aa18.1■□□□□ 0.49
APEX1-207ENST00000554325 C19orf44Q9H6X5 657 aa18.1■□□□□ 0.49
APEX1-207ENST00000554325 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
APEX1-207ENST00000554325 FAM135BQ49AJ0 1406 aa18.09■□□□□ 0.49
APEX1-207ENST00000554325 NBPF8Q3BBV2 869 aa18.09■□□□□ 0.49
APEX1-207ENST00000554325 PRAM1Q96QH2 718 aa18.09■□□□□ 0.49
APEX1-207ENST00000554325 RALGAPBQ86X10 1494 aa18.08■□□□□ 0.49
APEX1-207ENST00000554325 ADGRL3Q9HAR2 1447 aa18.08■□□□□ 0.49
APEX1-207ENST00000554325 SAFB2Q14151 953 aaKnown RBP eCLIP18.08■□□□□ 0.48
APEX1-207ENST00000554325 WAPLQ7Z5K2 1190 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms