RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 RAB3GAP2Q9H2M9 1393 aa30.41■■■□□ 2.46
FOXA1-203ENST00000553751 STRCP1A6NGW2 1772 aa30.4■■■□□ 2.46
FOXA1-203ENST00000553751 ACIN1Q9UKV3 1341 aaKnown RBP30.38■■■□□ 2.45
FOXA1-203ENST00000553751 PLEKHG1Q9ULL1 1385 aa30.38■■■□□ 2.45
FOXA1-203ENST00000553751 MPHOSPH9Q99550 1183 aa30.37■■■□□ 2.45
FOXA1-203ENST00000553751 PPP1R15AO75807 674 aaPredicted RBP30.34■■■□□ 2.45
FOXA1-203ENST00000553751 HDGFP51858 240 aaKnown RBP30.34■■■□□ 2.45
FOXA1-203ENST00000553751 FOXD1Q16676 465 aa30.34■■■□□ 2.45
FOXA1-203ENST00000553751 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.34■■■□□ 2.45
FOXA1-203ENST00000553751 KIF1BO60333 1816 aa30.33■■■□□ 2.45
FOXA1-203ENST00000553751 SLC26A8Q96RN1 970 aa30.31■■■□□ 2.44
FOXA1-203ENST00000553751 NUTM2DQ5VT03 806 aaPredicted RBP30.3■■■□□ 2.44
FOXA1-203ENST00000553751 NEXMIFQ5QGS0 1516 aa30.28■■■□□ 2.44
FOXA1-203ENST00000553751 LRRC7Q96NW7 1537 aa30.28■■■□□ 2.44
FOXA1-203ENST00000553751 ZNF326Q5BKZ1 582 aaKnown RBP30.26■■■□□ 2.43
FOXA1-203ENST00000553751 BCANQ96GW7 911 aa30.26■■■□□ 2.43
FOXA1-203ENST00000553751 SENP3Q9H4L4 574 aaPredicted RBP30.26■■■□□ 2.43
FOXA1-203ENST00000553751 NWD1Q149M9 1564 aa30.25■■■□□ 2.43
FOXA1-203ENST00000553751 ADAMTS13Q76LX8 1427 aa30.25■■■□□ 2.43
FOXA1-203ENST00000553751 DIP2AQ14689 1571 aa30.24■■■□□ 2.43
FOXA1-203ENST00000553751 CCDC144AA2RUR9 1427 aa30.23■■■□□ 2.43
FOXA1-203ENST00000553751 NRXN3Q9Y4C0 1643 aa30.22■■■□□ 2.43
FOXA1-203ENST00000553751 HRCP23327 699 aa30.21■■■□□ 2.43
FOXA1-203ENST00000553751 SETBP1Q9Y6X0 1596 aa30.2■■■□□ 2.43
FOXA1-203ENST00000553751 KCNA6P17658 529 aa30.2■■■□□ 2.43
FOXA1-203ENST00000553751 TBX22Q9Y458 520 aa30.18■■■□□ 2.42
FOXA1-203ENST00000553751 NKTRP30414 1462 aaKnown RBP30.18■■■□□ 2.42
FOXA1-203ENST00000553751 CHD2O14647 1828 aaKnown RBP30.17■■■□□ 2.42
FOXA1-203ENST00000553751 XIRP1Q702N8 1843 aaKnown RBP30.17■■■□□ 2.42
FOXA1-203ENST00000553751 UBAP1LF5GYI3 381 aa30.16■■■□□ 2.42
FOXA1-203ENST00000553751 SPATA31E1Q6ZUB1 1445 aa30.15■■■□□ 2.42
FOXA1-203ENST00000553751 PPLO60437 1756 aa30.14■■■□□ 2.42
FOXA1-203ENST00000553751 ALKQ9UM73 1620 aa30.13■■■□□ 2.41
FOXA1-203ENST00000553751 RPGRIP1LQ68CZ1 1315 aa30.12■■■□□ 2.41
FOXA1-203ENST00000553751 PIK3R4Q99570 1358 aa30.12■■■□□ 2.41
FOXA1-203ENST00000553751 TMEM94Q12767 1356 aa30.1■■■□□ 2.41
FOXA1-203ENST00000553751 ANKRD30BQ9BXX2 1392 aa30.06■■■□□ 2.4
FOXA1-203ENST00000553751 IFT172Q9UG01 1749 aa30.06■■■□□ 2.4
FOXA1-203ENST00000553751 PTPRUQ92729 1446 aa30.05■■■□□ 2.4
FOXA1-203ENST00000553751 VGFO15240 615 aaPredicted RBP30.05■■■□□ 2.4
FOXA1-203ENST00000553751 TOM1O60784 492 aa30.05■■■□□ 2.4
FOXA1-203ENST00000553751 PROSER2Q86WR7 435 aaPredicted RBP30.04■■■□□ 2.4
FOXA1-203ENST00000553751 XRN1Q8IZH2 1706 aaKnown RBP30.03■■■□□ 2.4
FOXA1-203ENST00000553751 METP08581 1390 aa30.03■■■□□ 2.4
FOXA1-203ENST00000553751 SETD1AO15047 1707 aaKnown RBP30.02■■■□□ 2.4
FOXA1-203ENST00000553751 RGL3Q3MIN7 710 aa30.01■■■□□ 2.39
FOXA1-203ENST00000553751 RBM33Q96EV2 1170 aaKnown RBP30.01■■■□□ 2.39
FOXA1-203ENST00000553751 AMOTL2Q9Y2J4 779 aa29.98■■■□□ 2.39
FOXA1-203ENST00000553751 PIP4K2BP78356 416 aa29.97■■■□□ 2.39
FOXA1-203ENST00000553751 ADGRF5Q8IZF2 1346 aa29.96■■■□□ 2.39
FOXA1-203ENST00000553751 NCOA3Q9Y6Q9 1424 aa29.95■■■□□ 2.38
FOXA1-203ENST00000553751 SCAF1Q9H7N4 1312 aaKnown RBP29.95■■■□□ 2.38
FOXA1-203ENST00000553751 PIK3C2GO75747 1445 aa29.91■■■□□ 2.38
FOXA1-203ENST00000553751 MSH6P52701 1360 aa29.9■■■□□ 2.38
FOXA1-203ENST00000553751 MYOM2P54296 1465 aa29.9■■■□□ 2.38
FOXA1-203ENST00000553751 NRXN1Q9ULB1 1477 aa29.89■■■□□ 2.38
FOXA1-203ENST00000553751 PRAG1Q86YV5 1406 aa29.87■■■□□ 2.37
FOXA1-203ENST00000553751 PTCH1Q13635 1447 aa29.85■■■□□ 2.37
FOXA1-203ENST00000553751 TRIM26Q12899 539 aaPredicted RBP29.84■■■□□ 2.37
FOXA1-203ENST00000553751 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.83■■■□□ 2.37
FOXA1-203ENST00000553751 ASXL1Q8IXJ9 1541 aa29.83■■■□□ 2.37
FOXA1-203ENST00000553751 HSPA1LP34931 641 aa29.82■■■□□ 2.36
FOXA1-203ENST00000553751 C14orf37Q86TY3 774 aa29.81■■■□□ 2.36
FOXA1-203ENST00000553751 FAM135BQ49AJ0 1406 aa29.8■■■□□ 2.36
FOXA1-203ENST00000553751 ROBO2Q9HCK4 1378 aa29.79■■■□□ 2.36
FOXA1-203ENST00000553751 C19orf44Q9H6X5 657 aa29.79■■■□□ 2.36
FOXA1-203ENST00000553751 ROBO1Q9Y6N7 1651 aa29.78■■■□□ 2.36
FOXA1-203ENST00000553751 LAMC1P11047 1609 aa29.78■■■□□ 2.36
FOXA1-203ENST00000553751 DCCP43146 1447 aa29.77■■■□□ 2.36
FOXA1-203ENST00000553751 ADGRL3Q9HAR2 1447 aa29.77■■■□□ 2.36
FOXA1-203ENST00000553751 NALCNQ8IZF0 1738 aa29.76■■■□□ 2.36
FOXA1-203ENST00000553751 DHX57Q6P158 1386 aaKnown RBP29.76■■■□□ 2.35
FOXA1-203ENST00000553751 TECPR2O15040 1411 aa29.74■■■□□ 2.35
FOXA1-203ENST00000553751 SLAIN2Q9P270 581 aa29.74■■■□□ 2.35
FOXA1-203ENST00000553751 CADPS2Q86UW7 1296 aa29.73■■■□□ 2.35
FOXA1-203ENST00000553751 C14orf93Q9H972 538 aaKnown RBP29.73■■■□□ 2.35
FOXA1-203ENST00000553751 LRPPRCP42704 1394 aaKnown RBP29.73■■■□□ 2.35
FOXA1-203ENST00000553751 KNDC1Q76NI1 1749 aa29.73■■■□□ 2.35
FOXA1-203ENST00000553751 ATF3P18847 181 aa29.71■■■□□ 2.35
FOXA1-203ENST00000553751 DCAF11Q8TEB1 546 aa29.71■■■□□ 2.35
FOXA1-203ENST00000553751 CFAP70Q5T0N1 1121 aa29.7■■■□□ 2.35
FOXA1-203ENST00000553751 TMEM132EQ6IEE7 984 aa29.7■■■□□ 2.35
FOXA1-203ENST00000553751 YTHDC2Q9H6S0 1430 aaKnown RBP29.69■■■□□ 2.34
FOXA1-203ENST00000553751 ABCC11Q96J66 1382 aa29.68■■■□□ 2.34
FOXA1-203ENST00000553751 STAC3Q96MF2 364 aa29.67■■■□□ 2.34
FOXA1-203ENST00000553751 KDM2AQ9Y2K7 1162 aa29.67■■■□□ 2.34
FOXA1-203ENST00000553751 MST1RQ04912 1400 aa29.66■■■□□ 2.34
FOXA1-203ENST00000553751 STK26Q9P289 416 aa29.66■■■□□ 2.34
FOXA1-203ENST00000553751 ADGRB1O14514 1584 aa29.65■■■□□ 2.34
FOXA1-203ENST00000553751 PLEKHH1Q9ULM0 1364 aa29.6■■■□□ 2.33
FOXA1-203ENST00000553751 CDC42BPGQ6DT37 1551 aa29.6■■■□□ 2.33
FOXA1-203ENST00000553751 PHLPP1O60346 1717 aa29.57■■■□□ 2.32
FOXA1-203ENST00000553751 WAPLQ7Z5K2 1190 aa29.57■■■□□ 2.32
FOXA1-203ENST00000553751 SIN3AQ96ST3 1273 aa29.57■■■□□ 2.32
FOXA1-203ENST00000553751 AHDC1Q5TGY3 1603 aaPredicted RBP29.56■■■□□ 2.32
FOXA1-203ENST00000553751 DLC1Q96QB1 1528 aa29.56■■■□□ 2.32
FOXA1-203ENST00000553751 BRINP3Q76B58 766 aa29.56■■■□□ 2.32
FOXA1-203ENST00000553751 SIRT1Q96EB6 747 aa29.55■■■□□ 2.32
FOXA1-203ENST00000553751 COL16A1Q07092 1604 aaPredicted RBP29.54■■■□□ 2.32
FOXA1-203ENST00000553751 C1orf167Q5SNV9 1468 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms