RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 CCDC144AA2RUR9 1427 aa25.97■■□□□ 1.75
CDK4-210ENST00000551888 EID1Q9Y6B2 187 aa25.95■■□□□ 1.74
CDK4-210ENST00000551888 LTBP4Q8N2S1 1624 aa25.95■■□□□ 1.74
CDK4-210ENST00000551888 PPLO60437 1756 aa25.95■■□□□ 1.74
CDK4-210ENST00000551888 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.74
CDK4-210ENST00000551888 STRCP1A6NGW2 1772 aa25.93■■□□□ 1.74
CDK4-210ENST00000551888 SPATA31E1Q6ZUB1 1445 aa25.93■■□□□ 1.74
CDK4-210ENST00000551888 IFT172Q9UG01 1749 aa25.92■■□□□ 1.74
CDK4-210ENST00000551888 NUTM2DQ5VT03 806 aaPredicted RBP25.92■■□□□ 1.74
CDK4-210ENST00000551888 NRXN3Q9Y4C0 1643 aa25.91■■□□□ 1.74
CDK4-210ENST00000551888 ZNF335Q9H4Z2 1342 aaPredicted RBP25.9■■□□□ 1.74
CDK4-210ENST00000551888 PLEKHG1Q9ULL1 1385 aa25.89■■□□□ 1.74
CDK4-210ENST00000551888 ZNF326Q5BKZ1 582 aaKnown RBP25.88■■□□□ 1.73
CDK4-210ENST00000551888 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
CDK4-210ENST00000551888 PPP1R15AO75807 674 aaPredicted RBP25.85■■□□□ 1.73
CDK4-210ENST00000551888 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.85■■□□□ 1.73
CDK4-210ENST00000551888 ADAMTS13Q76LX8 1427 aa25.84■■□□□ 1.73
CDK4-210ENST00000551888 SETBP1Q9Y6X0 1596 aa25.84■■□□□ 1.73
CDK4-210ENST00000551888 DHX57Q6P158 1386 aaKnown RBP25.82■■□□□ 1.72
CDK4-210ENST00000551888 HDGFP51858 240 aaKnown RBP25.82■■□□□ 1.72
CDK4-210ENST00000551888 SLC26A8Q96RN1 970 aa25.82■■□□□ 1.72
CDK4-210ENST00000551888 DIP2AQ14689 1571 aa25.81■■□□□ 1.72
CDK4-210ENST00000551888 SETD1AO15047 1707 aaKnown RBP25.8■■□□□ 1.72
CDK4-210ENST00000551888 RGL3Q3MIN7 710 aa25.79■■□□□ 1.72
CDK4-210ENST00000551888 PCGF6Q9BYE7 350 aa25.79■■□□□ 1.72
CDK4-210ENST00000551888 CHD2O14647 1828 aaKnown RBP25.79■■□□□ 1.72
CDK4-210ENST00000551888 NWD1Q149M9 1564 aa25.78■■□□□ 1.72
CDK4-210ENST00000551888 RPGRIP1LQ68CZ1 1315 aa25.78■■□□□ 1.72
CDK4-210ENST00000551888 CPS1P31327 1500 aa25.77■■□□□ 1.72
CDK4-210ENST00000551888 BCANQ96GW7 911 aa25.76■■□□□ 1.71
CDK4-210ENST00000551888 CERKQ8TCT0 537 aa25.74■■□□□ 1.71
CDK4-210ENST00000551888 XIRP1Q702N8 1843 aaKnown RBP25.74■■□□□ 1.71
CDK4-210ENST00000551888 ADGRF5Q8IZF2 1346 aa25.71■■□□□ 1.71
CDK4-210ENST00000551888 TBX22Q9Y458 520 aa25.71■■□□□ 1.71
CDK4-210ENST00000551888 ALKQ9UM73 1620 aa25.7■■□□□ 1.71
CDK4-210ENST00000551888 LRRC7Q96NW7 1537 aa25.7■■□□□ 1.7
CDK4-210ENST00000551888 VGFO15240 615 aaPredicted RBP25.7■■□□□ 1.7
CDK4-210ENST00000551888 MYOM2P54296 1465 aa25.7■■□□□ 1.7
CDK4-210ENST00000551888 XRN1Q8IZH2 1706 aaKnown RBP25.68■■□□□ 1.7
CDK4-210ENST00000551888 IQSEC2Q5JU85 1478 aa25.68■■□□□ 1.7
CDK4-210ENST00000551888 NRXN1Q9ULB1 1477 aa25.68■■□□□ 1.7
CDK4-210ENST00000551888 PTPRUQ92729 1446 aa25.68■■□□□ 1.7
CDK4-210ENST00000551888 PIK3C2GO75747 1445 aa25.67■■□□□ 1.7
CDK4-210ENST00000551888 METP08581 1390 aa25.67■■□□□ 1.7
CDK4-210ENST00000551888 NKTRP30414 1462 aaKnown RBP25.66■■□□□ 1.7
CDK4-210ENST00000551888 KCNA6P17658 529 aa25.66■■□□□ 1.7
CDK4-210ENST00000551888 PIK3R4Q99570 1358 aa25.65■■□□□ 1.7
CDK4-210ENST00000551888 SIN3AQ96ST3 1273 aa25.64■■□□□ 1.7
CDK4-210ENST00000551888 ASXL1Q8IXJ9 1541 aa25.63■■□□□ 1.69
CDK4-210ENST00000551888 LAMC1P11047 1609 aa25.59■■□□□ 1.69
CDK4-210ENST00000551888 DCAF11Q8TEB1 546 aa25.57■■□□□ 1.68
CDK4-210ENST00000551888 RBM33Q96EV2 1170 aaKnown RBP25.56■■□□□ 1.68
CDK4-210ENST00000551888 TMEM94Q12767 1356 aa25.56■■□□□ 1.68
CDK4-210ENST00000551888 AMOTL2Q9Y2J4 779 aa25.55■■□□□ 1.68
CDK4-210ENST00000551888 KDM2AQ9Y2K7 1162 aa25.54■■□□□ 1.68
CDK4-210ENST00000551888 NEUROD1Q13562 356 aa25.53■■□□□ 1.68
CDK4-210ENST00000551888 KNDC1Q76NI1 1749 aa25.52■■□□□ 1.68
CDK4-210ENST00000551888 PROSER2Q86WR7 435 aaPredicted RBP25.52■■□□□ 1.68
CDK4-210ENST00000551888 PRAG1Q86YV5 1406 aa25.52■■□□□ 1.68
CDK4-210ENST00000551888 ADGRB1O14514 1584 aa25.5■■□□□ 1.67
CDK4-210ENST00000551888 CFAP70Q5T0N1 1121 aa25.5■■□□□ 1.67
CDK4-210ENST00000551888 FBXO41Q8TF61 875 aa25.5■■□□□ 1.67
CDK4-210ENST00000551888 C14orf93Q9H972 538 aaKnown RBP25.5■■□□□ 1.67
CDK4-210ENST00000551888 PTCH1Q13635 1447 aa25.48■■□□□ 1.67
CDK4-210ENST00000551888 L3MBTL2Q969R5 705 aa25.48■■□□□ 1.67
CDK4-210ENST00000551888 NALCNQ8IZF0 1738 aa25.48■■□□□ 1.67
CDK4-210ENST00000551888 TMEM132EQ6IEE7 984 aa25.47■■□□□ 1.67
CDK4-210ENST00000551888 KIAA1210Q9ULL0 1709 aa25.46■■□□□ 1.67
CDK4-210ENST00000551888 ROBO2Q9HCK4 1378 aa25.46■■□□□ 1.67
CDK4-210ENST00000551888 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
CDK4-210ENST00000551888 TECPR2O15040 1411 aa25.46■■□□□ 1.67
CDK4-210ENST00000551888 ILDR1Q86SU0 546 aaPredicted RBP25.45■■□□□ 1.66
CDK4-210ENST00000551888 STAC3Q96MF2 364 aa25.45■■□□□ 1.66
CDK4-210ENST00000551888 LRPPRCP42704 1394 aaKnown RBP25.44■■□□□ 1.66
CDK4-210ENST00000551888 YTHDC2Q9H6S0 1430 aaKnown RBP25.44■■□□□ 1.66
CDK4-210ENST00000551888 UBAP1LF5GYI3 381 aa25.43■■□□□ 1.66
CDK4-210ENST00000551888 NCOA3Q9Y6Q9 1424 aa25.43■■□□□ 1.66
CDK4-210ENST00000551888 TRPM1Q7Z4N2 1603 aa25.4■■□□□ 1.66
CDK4-210ENST00000551888 STK26Q9P289 416 aa25.39■■□□□ 1.66
CDK4-210ENST00000551888 MSH6P52701 1360 aa25.39■■□□□ 1.65
CDK4-210ENST00000551888 ABCC11Q96J66 1382 aa25.39■■□□□ 1.65
CDK4-210ENST00000551888 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
CDK4-210ENST00000551888 ARHGEF28Q8N1W1 1705 aaKnown RBP25.37■■□□□ 1.65
CDK4-210ENST00000551888 TONSLQ96HA7 1378 aa25.36■■□□□ 1.65
CDK4-210ENST00000551888 PLEKHH1Q9ULM0 1364 aa25.36■■□□□ 1.65
CDK4-210ENST00000551888 TOM1O60784 492 aa25.35■■□□□ 1.65
CDK4-210ENST00000551888 DLC1Q96QB1 1528 aa25.35■■□□□ 1.65
CDK4-210ENST00000551888 C14orf37Q86TY3 774 aa25.33■■□□□ 1.65
CDK4-210ENST00000551888 CLSPNQ9HAW4 1339 aa25.33■■□□□ 1.64
CDK4-210ENST00000551888 DCCP43146 1447 aa25.31■■□□□ 1.64
CDK4-210ENST00000551888 FAM135BQ49AJ0 1406 aa25.31■■□□□ 1.64
CDK4-210ENST00000551888 PIP4K2BP78356 416 aa25.31■■□□□ 1.64
CDK4-210ENST00000551888 NBPF1Q3BBV0 1214 aa25.31■■□□□ 1.64
CDK4-210ENST00000551888 WAPLQ7Z5K2 1190 aa25.31■■□□□ 1.64
CDK4-210ENST00000551888 C19orf44Q9H6X5 657 aa25.31■■□□□ 1.64
CDK4-210ENST00000551888 ROBO1Q9Y6N7 1651 aa25.31■■□□□ 1.64
CDK4-210ENST00000551888 NBPF8Q3BBV2 869 aa25.3■■□□□ 1.64
CDK4-210ENST00000551888 CDC42BPGQ6DT37 1551 aa25.29■■□□□ 1.64
CDK4-210ENST00000551888 CCER1Q8TC90 406 aaPredicted RBP25.28■■□□□ 1.64
CDK4-210ENST00000551888 SCAF1Q9H7N4 1312 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms