RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CEBPAP49715 358 aaPredicted RBP15.47■□□□□ 0.07
NR4A1-215ENST00000550557 STRN4Q9NRL3 753 aa15.46■□□□□ 0.07
NR4A1-215ENST00000550557 PLB1Q6P1J6 1458 aa15.46■□□□□ 0.07
NR4A1-215ENST00000550557 CABP2Q9NPB3 220 aa15.46■□□□□ 0.07
NR4A1-215ENST00000550557 MAPKBP1O60336 1514 aa15.46■□□□□ 0.06
NR4A1-215ENST00000550557 KIAA1107Q9UPP5 1409 aa15.46■□□□□ 0.06
NR4A1-215ENST00000550557 APBB1O00213 710 aa15.45■□□□□ 0.06
NR4A1-215ENST00000550557 FRAT2O75474 233 aaPredicted RBP15.45■□□□□ 0.06
NR4A1-215ENST00000550557 CCDC146Q8IYE0 955 aa15.45■□□□□ 0.06
NR4A1-215ENST00000550557 NAP1L2Q9ULW6 460 aaPredicted RBP15.45■□□□□ 0.06
NR4A1-215ENST00000550557 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
NR4A1-215ENST00000550557 SLC4A10Q6U841 1118 aa15.45■□□□□ 0.06
NR4A1-215ENST00000550557 PRAM1Q96QH2 718 aa15.44■□□□□ 0.06
NR4A1-215ENST00000550557 ADGRL1O94910 1474 aa15.44■□□□□ 0.06
NR4A1-215ENST00000550557 MYBBP1AQ9BQG0 1328 aaKnown RBP15.44■□□□□ 0.06
NR4A1-215ENST00000550557 CDK11BP21127 795 aaKnown RBP15.43■□□□□ 0.06
NR4A1-215ENST00000550557 TULP1O00294 542 aaPredicted RBP15.42■□□□□ 0.06
NR4A1-215ENST00000550557 RGS3P49796 1198 aa15.42■□□□□ 0.06
NR4A1-215ENST00000550557 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
NR4A1-215ENST00000550557 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
NR4A1-215ENST00000550557 DENND4BO75064 1496 aaPredicted RBP15.42■□□□□ 0.06
NR4A1-215ENST00000550557 ABCC5O15440 1437 aa15.42■□□□□ 0.06
NR4A1-215ENST00000550557 UGGT2Q9NYU1 1516 aa15.41■□□□□ 0.06
NR4A1-215ENST00000550557 DEKP35659 375 aaKnown RBP15.41■□□□□ 0.06
NR4A1-215ENST00000550557 NBPF8Q3BBV2 869 aa15.41■□□□□ 0.06
NR4A1-215ENST00000550557 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
NR4A1-215ENST00000550557 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
NR4A1-215ENST00000550557 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
NR4A1-215ENST00000550557 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
NR4A1-215ENST00000550557 ITPRIPQ8IWB1 547 aa15.39■□□□□ 0.05
NR4A1-215ENST00000550557 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
NR4A1-215ENST00000550557 PTPRKQ15262 1439 aa15.39■□□□□ 0.05
NR4A1-215ENST00000550557 RRP7AQ9Y3A4 280 aaKnown RBP15.39■□□□□ 0.05
NR4A1-215ENST00000550557 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
NR4A1-215ENST00000550557 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
NR4A1-215ENST00000550557 RCAN3Q9UKA8 241 aa15.38■□□□□ 0.05
NR4A1-215ENST00000550557 ANKRD30BQ9BXX2 1392 aa15.38■□□□□ 0.05
NR4A1-215ENST00000550557 PDE3BQ13370 1112 aa15.37■□□□□ 0.05
NR4A1-215ENST00000550557 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
NR4A1-215ENST00000550557 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
NR4A1-215ENST00000550557 BECN1Q14457 450 aa15.37■□□□□ 0.05
NR4A1-215ENST00000550557 EIF2S2P20042 333 aaKnown RBP15.37■□□□□ 0.05
NR4A1-215ENST00000550557 RPGRIP1LQ68CZ1 1315 aa15.36■□□□□ 0.05
NR4A1-215ENST00000550557 NEXNQ0ZGT2 675 aa15.36■□□□□ 0.05
NR4A1-215ENST00000550557 TOM1L2Q6ZVM7 507 aa15.36■□□□□ 0.05
NR4A1-215ENST00000550557 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
NR4A1-215ENST00000550557 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
NR4A1-215ENST00000550557 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
NR4A1-215ENST00000550557 HMMRO75330 724 aa15.34■□□□□ 0.05
NR4A1-215ENST00000550557 ABCA5Q8WWZ7 1642 aa15.34■□□□□ 0.05
NR4A1-215ENST00000550557 XPCQ01831 940 aaPredicted RBP15.33■□□□□ 0.05
NR4A1-215ENST00000550557 FBXO31Q5XUX0 539 aaPredicted RBP15.33■□□□□ 0.04
NR4A1-215ENST00000550557 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
NR4A1-215ENST00000550557 ZRSR1Q15695 479 aaKnown RBP15.33■□□□□ 0.04
NR4A1-215ENST00000550557 FANCAO15360 1455 aa15.33■□□□□ 0.04
NR4A1-215ENST00000550557 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
NR4A1-215ENST00000550557 CDK19Q9BWU1 502 aa15.32■□□□□ 0.04
NR4A1-215ENST00000550557 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
NR4A1-215ENST00000550557 CCDC141Q6ZP82 1450 aa15.32■□□□□ 0.04
NR4A1-215ENST00000550557 TCOF1Q13428 1488 aaKnown RBP15.32■□□□□ 0.04
NR4A1-215ENST00000550557 KIF14Q15058 1648 aa15.31■□□□□ 0.04
NR4A1-215ENST00000550557 KIAA1211Q6ZU35 1233 aa15.31■□□□□ 0.04
NR4A1-215ENST00000550557 ASXL2Q76L83 1435 aa15.31■□□□□ 0.04
NR4A1-215ENST00000550557 RAPGEF6Q8TEU7 1601 aa15.31■□□□□ 0.04
NR4A1-215ENST00000550557 GPATCH3Q96I76 525 aa15.31■□□□□ 0.04
NR4A1-215ENST00000550557 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
NR4A1-215ENST00000550557 UBAP1LF5GYI3 381 aa15.3■□□□□ 0.04
NR4A1-215ENST00000550557 TATP17735 454 aaPredicted RBP15.3■□□□□ 0.04
NR4A1-215ENST00000550557 ERBINQ96RT1 1412 aa15.3■□□□□ 0.04
NR4A1-215ENST00000550557 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
NR4A1-215ENST00000550557 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
NR4A1-215ENST00000550557 HMOX1P09601 288 aa15.29■□□□□ 0.04
NR4A1-215ENST00000550557 NUP153P49790 1475 aaKnown RBP15.29■□□□□ 0.04
NR4A1-215ENST00000550557 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
NR4A1-215ENST00000550557 DDX58O95786 925 aaKnown RBP15.29■□□□□ 0.04
NR4A1-215ENST00000550557 MCCP23508 829 aa15.29■□□□□ 0.04
NR4A1-215ENST00000550557 CABP1Q9NZU7 370 aa15.29■□□□□ 0.04
NR4A1-215ENST00000550557 WDR62O43379 1518 aa15.29■□□□□ 0.04
NR4A1-215ENST00000550557 TOM1O60784 492 aa15.28■□□□□ 0.04
NR4A1-215ENST00000550557 IPO9Q96P70 1041 aaKnown RBP15.28■□□□□ 0.04
NR4A1-215ENST00000550557 SAMD9Q5K651 1589 aa15.28■□□□□ 0.04
NR4A1-215ENST00000550557 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
NR4A1-215ENST00000550557 ADAMTS2O95450 1211 aa15.28■□□□□ 0.04
NR4A1-215ENST00000550557 PLEKHO1Q53GL0 409 aaPredicted RBP15.28■□□□□ 0.04
NR4A1-215ENST00000550557 DDX54Q8TDD1 881 aaKnown RBP15.28■□□□□ 0.04
NR4A1-215ENST00000550557 NECTIN2Q92692 538 aa15.27■□□□□ 0.04
NR4A1-215ENST00000550557 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
NR4A1-215ENST00000550557 NGLY1Q96IV0 654 aa15.27■□□□□ 0.04
NR4A1-215ENST00000550557 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.03
NR4A1-215ENST00000550557 KIAA0556O60303 1618 aa15.27■□□□□ 0.03
NR4A1-215ENST00000550557 RIPK4P57078 832 aa15.27■□□□□ 0.03
NR4A1-215ENST00000550557 GPATCH8Q9UKJ3 1502 aaKnown RBP15.26■□□□□ 0.03
NR4A1-215ENST00000550557 ZC3H6P61129 1189 aaKnown RBP15.26■□□□□ 0.03
NR4A1-215ENST00000550557 RBM33Q96EV2 1170 aaKnown RBP15.26■□□□□ 0.03
NR4A1-215ENST00000550557 AMOTL2Q9Y2J4 779 aa15.26■□□□□ 0.03
NR4A1-215ENST00000550557 BRD4O60885 1362 aaPredicted RBP15.26■□□□□ 0.03
NR4A1-215ENST00000550557 CFAP44Q96MT7 982 aa15.26■□□□□ 0.03
NR4A1-215ENST00000550557 C9orf78Q9NZ63 289 aaPredicted RBP15.26■□□□□ 0.03
NR4A1-215ENST00000550557 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
NR4A1-215ENST00000550557 SMG6Q86US8 1419 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms