RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 ADGRB3O60242 1522 aa18.89■□□□□ 0.61
TROAP-212ENST00000550346 MYO5BQ9ULV0 1848 aa18.88■□□□□ 0.61
TROAP-212ENST00000550346 VGFO15240 615 aaPredicted RBP18.88■□□□□ 0.61
TROAP-212ENST00000550346 TMEM131LA2VDJ0 1609 aa18.87■□□□□ 0.61
TROAP-212ENST00000550346 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
TROAP-212ENST00000550346 RIMS2Q9UQ26 1411 aa18.86■□□□□ 0.61
TROAP-212ENST00000550346 LTKP29376 864 aa18.86■□□□□ 0.61
TROAP-212ENST00000550346 STAC3Q96MF2 364 aa18.83■□□□□ 0.6
TROAP-212ENST00000550346 DCAF11Q8TEB1 546 aa18.82■□□□□ 0.6
TROAP-212ENST00000550346 KDM2AQ9Y2K7 1162 aa18.82■□□□□ 0.6
TROAP-212ENST00000550346 SLIT1O75093 1534 aa18.82■□□□□ 0.6
TROAP-212ENST00000550346 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
TROAP-212ENST00000550346 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
TROAP-212ENST00000550346 ARHGAP23Q9P227 1491 aa18.8■□□□□ 0.6
TROAP-212ENST00000550346 SPATA31E1Q6ZUB1 1445 aa18.8■□□□□ 0.6
TROAP-212ENST00000550346 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
TROAP-212ENST00000550346 STRCQ7RTU9 1775 aa18.77■□□□□ 0.6
TROAP-212ENST00000550346 ZFYVE9O95405 1425 aa18.76■□□□□ 0.59
TROAP-212ENST00000550346 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
TROAP-212ENST00000550346 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
TROAP-212ENST00000550346 SLC26A8Q96RN1 970 aa18.75■□□□□ 0.59
TROAP-212ENST00000550346 PLEKHG1Q9ULL1 1385 aa18.75■□□□□ 0.59
TROAP-212ENST00000550346 MED14O60244 1454 aa18.74■□□□□ 0.59
TROAP-212ENST00000550346 TONSLQ96HA7 1378 aa18.74■□□□□ 0.59
TROAP-212ENST00000550346 L3MBTL2Q969R5 705 aa18.74■□□□□ 0.59
TROAP-212ENST00000550346 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
TROAP-212ENST00000550346 TBX22Q9Y458 520 aa18.73■□□□□ 0.59
TROAP-212ENST00000550346 IFT172Q9UG01 1749 aa18.73■□□□□ 0.59
TROAP-212ENST00000550346 PPLO60437 1756 aa18.72■□□□□ 0.59
TROAP-212ENST00000550346 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
TROAP-212ENST00000550346 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.59
TROAP-212ENST00000550346 TIMELESSQ9UNS1 1208 aa18.71■□□□□ 0.59
TROAP-212ENST00000550346 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
TROAP-212ENST00000550346 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
TROAP-212ENST00000550346 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
TROAP-212ENST00000550346 KCNA6P17658 529 aa18.64■□□□□ 0.57
TROAP-212ENST00000550346 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
TROAP-212ENST00000550346 MYOM2P54296 1465 aa18.63■□□□□ 0.57
TROAP-212ENST00000550346 PIK3R4Q99570 1358 aa18.61■□□□□ 0.57
TROAP-212ENST00000550346 ZNF335Q9H4Z2 1342 aaPredicted RBP18.61■□□□□ 0.57
TROAP-212ENST00000550346 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
TROAP-212ENST00000550346 SETBP1Q9Y6X0 1596 aa18.6■□□□□ 0.57
TROAP-212ENST00000550346 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
TROAP-212ENST00000550346 TMEM132EQ6IEE7 984 aa18.6■□□□□ 0.57
TROAP-212ENST00000550346 PROSER2Q86WR7 435 aaPredicted RBP18.6■□□□□ 0.57
TROAP-212ENST00000550346 DIP2AQ14689 1571 aa18.59■□□□□ 0.57
TROAP-212ENST00000550346 STK26Q9P289 416 aa18.59■□□□□ 0.57
TROAP-212ENST00000550346 ALKQ9UM73 1620 aa18.59■□□□□ 0.57
TROAP-212ENST00000550346 PIK3C2GO75747 1445 aa18.58■□□□□ 0.57
TROAP-212ENST00000550346 METP08581 1390 aa18.57■□□□□ 0.56
TROAP-212ENST00000550346 NBPF8Q3BBV2 869 aa18.57■□□□□ 0.56
TROAP-212ENST00000550346 NRXN1Q9ULB1 1477 aa18.57■□□□□ 0.56
TROAP-212ENST00000550346 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
TROAP-212ENST00000550346 PRAG1Q86YV5 1406 aa18.55■□□□□ 0.56
TROAP-212ENST00000550346 TRPM1Q7Z4N2 1603 aa18.54■□□□□ 0.56
TROAP-212ENST00000550346 NRXN3Q9Y4C0 1643 aa18.53■□□□□ 0.56
TROAP-212ENST00000550346 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
TROAP-212ENST00000550346 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.56
TROAP-212ENST00000550346 NBPF1Q3BBV0 1214 aa18.52■□□□□ 0.56
TROAP-212ENST00000550346 POGKQ9P215 609 aa18.52■□□□□ 0.56
TROAP-212ENST00000550346 LAMC1P11047 1609 aa18.52■□□□□ 0.55
TROAP-212ENST00000550346 CERKQ8TCT0 537 aa18.51■□□□□ 0.55
TROAP-212ENST00000550346 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
TROAP-212ENST00000550346 CPS1P31327 1500 aa18.5■□□□□ 0.55
TROAP-212ENST00000550346 LRPPRCP42704 1394 aaKnown RBP18.5■□□□□ 0.55
TROAP-212ENST00000550346 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
TROAP-212ENST00000550346 ROCK2O75116 1388 aaKnown RBP18.49■□□□□ 0.55
TROAP-212ENST00000550346 ABCC11Q96J66 1382 aa18.49■□□□□ 0.55
TROAP-212ENST00000550346 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
TROAP-212ENST00000550346 CARD11Q9BXL7 1154 aa18.48■□□□□ 0.55
TROAP-212ENST00000550346 SETD1AO15047 1707 aaKnown RBP18.48■□□□□ 0.55
TROAP-212ENST00000550346 PTPRUQ92729 1446 aa18.48■□□□□ 0.55
TROAP-212ENST00000550346 RBM33Q96EV2 1170 aaKnown RBP18.47■□□□□ 0.55
TROAP-212ENST00000550346 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.54
TROAP-212ENST00000550346 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.54
TROAP-212ENST00000550346 WAPLQ7Z5K2 1190 aa18.45■□□□□ 0.54
TROAP-212ENST00000550346 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
TROAP-212ENST00000550346 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
TROAP-212ENST00000550346 C19orf44Q9H6X5 657 aa18.44■□□□□ 0.54
TROAP-212ENST00000550346 LTBP4Q8N2S1 1624 aa18.44■□□□□ 0.54
TROAP-212ENST00000550346 STRCP1A6NGW2 1772 aa18.43■□□□□ 0.54
TROAP-212ENST00000550346 ATF3P18847 181 aa18.43■□□□□ 0.54
TROAP-212ENST00000550346 SAFB2Q14151 953 aaKnown RBP eCLIP18.43■□□□□ 0.54
TROAP-212ENST00000550346 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
TROAP-212ENST00000550346 NCOA3Q9Y6Q9 1424 aa18.42■□□□□ 0.54
TROAP-212ENST00000550346 NWD1Q149M9 1564 aa18.42■□□□□ 0.54
TROAP-212ENST00000550346 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
TROAP-212ENST00000550346 TOM1O60784 492 aa18.41■□□□□ 0.54
TROAP-212ENST00000550346 MSH6P52701 1360 aa18.41■□□□□ 0.54
TROAP-212ENST00000550346 EIF3AQ14152 1382 aaKnown RBP18.4■□□□□ 0.54
TROAP-212ENST00000550346 PTCH1Q13635 1447 aa18.4■□□□□ 0.54
TROAP-212ENST00000550346 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
TROAP-212ENST00000550346 ADGRB1O14514 1584 aa18.39■□□□□ 0.53
TROAP-212ENST00000550346 XRN1Q8IZH2 1706 aaKnown RBP18.39■□□□□ 0.53
TROAP-212ENST00000550346 TECPR2O15040 1411 aa18.39■□□□□ 0.53
TROAP-212ENST00000550346 ASXL1Q8IXJ9 1541 aa18.39■□□□□ 0.53
TROAP-212ENST00000550346 UBAP1LF5GYI3 381 aa18.38■□□□□ 0.53
TROAP-212ENST00000550346 CADPS2Q86UW7 1296 aa18.38■□□□□ 0.53
TROAP-212ENST00000550346 FBXO41Q8TF61 875 aa18.38■□□□□ 0.53
TROAP-212ENST00000550346 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms